BAC Information

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BAC

Clone NameB6Ng01-325C19
Chromosome10 (Build37)
Map Location 114,313,377 - 114,314,537
singlet/doubletsinglet
Overlap genenone
Upstream geneTrhde, 4930473D10Rik
Downstream geneTph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik, LOC668071, EG668073, Tspan8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325C19.bB6Ng01-325C19.g
ACCGA113300GA113301
length1,1471,176
definitionB6Ng01-325C19.b B6Ng01-325C19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcaactagggcacacagcagtatcgtgggttgagtcctggct
gcacaagaacaataggccccagcacttgtgaacatgaacttatttggggg
aagcatatgtgattatgctaaagatatcaagatgaagtcactctgtattt
taggtatgttcattcaagaaaatgaagagggagacttttgaccagtagga
atcttgattgtcaactggttgaagaaaataccaaagagacacacagagat
cacttacacatctgtgatggtgctacttgacacgactggcgtgtgggaca
gcacctgcagtggaaaacaacattcctaaatgtgagaaacactatccaag
agtctaccagtcccagtggacaaaagcaaaggaggaaggctgggcactgc
aagctcaattgctctccaagtgaaggtatttcttcctgtgattgttacca
atggtttctgccagcgtgctcagcttcggagtccacatgactattgctgc
agatcctagttgcctgaattatttcaggtctaacctctgtttctcatggg
tagcagagaaggcctttgtatgatcagaatgtatgaacattagaaaaatg
gttttttttttagattaaacttttttagcttttccttgttgagatacaat
actgttgcaggattttccctgtgcaatcacattagggcagtgagaggctt
atgattggacaggagaagggagacagactgaggaggtgaggagacagaga
gagagatctgaggaggagagggagaaccagaatggaggctgacacggtgt
tatcaaaaggttagaataattgtgttaaagcgttatcattatcacttggt
tctgaaattattgtattggcatcttgtaaattgtgttattagtgatacat
aaatctgactggctaaataagcattagagtcttgattctacatggtaatt
agtgttaagatggctaaccaggggtgtgtggggcttgtgtgaaagtgaga
ggaactcagaaagcccatcctgagagatggcctggtgggagccacgttga
ctcacaggtcagcagttgatgggctgaagtcgatgatgagatcccttgcc
aagagctagcctctagaattctaaacaaatgccactagcaactcgtc

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccacctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgtgtcaagctgctagtatgtgctctctcccgttttttct
tgaaagcactcatagctatgagttttcctcttagaaatgctttcattgtg
ttcccaaagtttgggtacgttgtgccttcattttcattaaactctaaaag
tctttatttcttttctttattctttcctgaaccagtattactggagaaga
aggtttttcagttccatggtaactgtggctttccgtatatgattgttatg
agagactaccgcctatagtgcatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_114313377_114314537
seq2: B6Ng01-325C19.b_48_1194

seq1  GAATTCATGCAACTAGGGCACACAGCAGTATCGTGGGTTGAGTCCTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCAACTAGGGCACACAGCAGTATCGTGGGTTGAGTCCTGGCT  50

seq1  GCACAAGAACAATAGGCCCCAGCACTTGTGAACATGAACTTATTTGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGAACAATAGGCCCCAGCACTTGTGAACATGAACTTATTTGGGGG  100

seq1  AAGCATATGTGATTATGCTAAAGATATCAAGATGAAGTCACTCTGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATGTGATTATGCTAAAGATATCAAGATGAAGTCACTCTGTATTT  150

seq1  TAGGTATGTTCATTCAAGAAAATGAAGAGGGAGACTTTTGACCAGTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATGTTCATTCAAGAAAATGAAGAGGGAGACTTTTGACCAGTAGGA  200

seq1  ATCTTGATTGTCAACTGGTTGAAGAAAATACCAAAGAGACACACAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGATTGTCAACTGGTTGAAGAAAATACCAAAGAGACACACAGAGAT  250

seq1  CACTTACACATCTGTGATGGTGCTACTTGACACGACTGGCGTGTGGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACACATCTGTGATGGTGCTACTTGACACGACTGGCGTGTGGGACA  300

seq1  GCACCTGCAGTGGAAAACAACATTCCTAAATGTGAGAAACACTATCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCAGTGGAAAACAACATTCCTAAATGTGAGAAACACTATCCAAG  350

seq1  AGTCTACCAGTCCCAGTGGACAAAAGCAAAGGAGGAAGGCTGGGCACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACCAGTCCCAGTGGACAAAAGCAAAGGAGGAAGGCTGGGCACTGC  400

seq1  AAGCTCAATTGCTCTCCAAGTGAAGGTATTTCTTCCTGTGATTGTTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAATTGCTCTCCAAGTGAAGGTATTTCTTCCTGTGATTGTTACCA  450

seq1  ATGGTTTCTGCCAGCGTGCTCAGCTTCGGAGTCCACATGACTATTGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTGCCAGCGTGCTCAGCTTCGGAGTCCACATGACTATTGCTGC  500

seq1  AGATCCTAGTTGCCTGAATTATTTCAGGTCTAACCTCTGTTTCTCATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTAGTTGCCTGAATTATTTCAGGTCTAACCTCTGTTTCTCATGGG  550

seq1  TAGCAGAGAAGGCCTTTGTATGATCAGAATGTATGAACATTAGAAAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGAAGGCCTTTGTATGATCAGAATGTATGAACATTAGAAAAATG  600

seq1  GTTTTTTTTTTAGATTAAACTTTTTTAGCTTTTCCTTGTTGAGATACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTAGATTAAACTTTTTTAGCTTTTCCTTGTTGAGATACAAT  650

seq1  ACTGTTGCAGGATTTTCCCTGTGCAATCACATTAGGGCAGTGAGAGGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGCAGGATTTTCCCTGTGCAATCACATTAGGGCAGTGAGAGGCTT  700

seq1  ATGATTGGACAGGAGAAGGGAGACAGACTGAGGAGGTGAGGAGACAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGGACAGGAGAAGGGAGACAGACTGAGGAGGTGAGGAGACAGAGA  750

seq1  GAGAGATCTGAGGAGGAGAGGGAGAACCAGAATGGAGGCTGACACGGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATCTGAGGAGGAGAGGGAGAACCAGAATGGAGGCTGACACGGTGT  800

seq1  TATCAAAAGGTTAGAATAATTGTGTTAAAGCGTTATCATTATCACTTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAGGTTAGAATAATTGTGTTAAAGCGTTATCATTATCACTTGGT  850

seq1  TCTGAAATTATTGTATTGGCATCTTGTAAATTGTGTTATTAGTGATACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATTATTGTATTGGCATCTTGTAAATTGTGTTATTAGTGATACAT  900

seq1  AAATCTGACTGGCTAAATAAGCATTAAGAGTCTTGATTCTACATGGTAAT  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAATCTGACTGGCTAAATAAGCATT-AGAGTCTTGATTCTACATGGTAAT  949

seq1  TAGGTGTTAAGATGGCTAACCAGGGGTGTGTGGGGCTTGTGTGAAAGTGA  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-GTGTTAAGATGGCTAACCAGGGGTGTGTGGGGCTTGTGTGAAAGTGA  998

seq1  GAGGAACTCAGAAAGGCCCAT-CTGAGAGATGGCCTGGTGGGAGCCACGT  1049
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  GAGGAACTCAGAAA-GCCCATCCTGAGAGATGGCCTGGTGGGAGCCACGT  1047

seq1  GGCCTCACAGGGTCAGCGAGTTGATGGGCTGAGAGTCAGATTGAGTGAGA  1099
       | |||||| ||||||| |||||||||||||| |||| || ||| |||||
seq2  TGACTCACA-GGTCAGC-AGTTGATGGGCTGA-AGTC-GA-TGA-TGAGA  1091

seq1  TCACCTGGCACAGGAGCTAG-CTCTAGATATTTCCCAAAACAAAATGCCA  1148
      || ||| || || ||||||| ||||||| |||   | |||| ||||||||
seq2  TC-CCTTGC-CAAGAGCTAGCCTCTAGA-ATT---CTAAAC-AAATGCCA  1134

seq1  CTAGCAACTCGTC  1161
      |||||||||||||
seq2  CTAGCAACTCGTC  1147


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