BAC Information

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BAC

Clone NameB6Ng01-326J08
Chromosome10 (Build37)
Map Location 95,262,001 - 95,367,995
singlet/doubletdoublet
Overlap genenone
Upstream genePlxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119
Downstream geneEea1, EG432491, LOC667380, Btg1, LOC628256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326J08.bB6Ng01-326J08.g
ACCGA114357GA114358
length1,0791,106
definitionB6Ng01-326J08.b B6Ng01-326J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,262,001 - 95,263,078)(95,366,885 - 95,367,995)
sequence
gaattctggctctgactcccatcccttactggttatataagcttggggca
gcaatttcaatgctctgggccatagtctttcgttaatttaaaatgaggta
ttaaacccactcggtctgtgtttgtcagaaggcctaaataagatataata
catgtgaaaatgctacactgtaaatttctaaagccaaacaaggcttgcag
aaattactgctttagtttggggcattattgggagaacagaaccattcatt
agcaacaccgcactttcctatcattaaatatgttgtttgtcctctcaagg
tctttattcatggattaaaaataaatctgttatgcattttgtttcaaagg
gcatctgataaggctttaaaagtttaaaactataaactgaatagtaaaag
gagcaactgaaagttaatggagcaggacttgtcaggagagagagagacta
tatgctgaattcgagataacatccatctcatttgcaaggaggaaatctct
aaccctcagaattatgctagaaatttcccaaggggttgattggtacaatg
cccatggtttgattaaattcttcacaggacttttggccatgggcacccaa
ggttccggaacaattatgattaaaaaaatttactcatgccaagtcagtta
caggagcaagagctcctgccccaagtttagcctggtgggatgatgcctgc
gatttagtctttcacatagcaaagtaacacagtctccctttggggtcctc
tgactcactgtgcatctagattattaggctactcatgcttaaacagttca
tcctcttgagtatttctgaactgtttgcttccacggtcagggttagggtt
agggttagggttaggattagtgggctcctcgagagtttaaacccatattc
ctaaaatacagctcttgcagtggactagtttagaaagtggccaagcctcc
tcactcaaggtagattctgaccagaaagacctatccaggttccctttctg
gcttttaaagttcgcaagattcagtgtgatgggtttgacatctgttgggg
aaaaatacttgatgtgattgctttacttc

gaattccatgcctgtcattctagtgattggagacagggagattataaatc
cttggccagcttcagctacacagagaaagataaccatcaggtactattat
tctctaatgggctactgtgcttttcacaatcaaccttcagaaagatagcc
tttgtgaaaggcaggaaaatgacatgaatgagggaaggaaaataaaatga
tcagaaagcacacgagaaaacatcacattaccaaatggcaaagataactg
atgtggggacagtgagatgacacagtggtaaagggaatattggggcctcc
ttttggggttcttaatgttattagtaaaagaattttaaaagaaactaaaa
tggaattgttgtgggaaatagtaaaaagaacggcaagttccagttcttca
cccagctattctcagccccggccgtcttgccagccagttcttatcttgtg
gagaatttctgactcagagctccaaaatctctccacccagcttgctaagt
tcccactgatgggttgctactatgcctgccccatgcttcccacggccttt
gcagtgtacatctggcaaacccacgctttgtctccatacctttctctctt
aaacccagttgatccactgcatgaaggaaaatgccacacaaacttagttc
agaaacaatggcacaacaacgagaatcccaatcttgtaaaccatattaaa
tataaatcctccgatgccaaatcaaaccggaaacactaatagctacatgt
tgccctctcactaacactgtccaaaaagcccctaactctctcctgcttcc
tctcttcctccatccaacccggaagtcccccaatacttgcctagtgattg
attcctttattcattaggagatggttcataagaagtcacctgagtatgtg
actcagtcctcattccagacagctcctccaggaaagcagaactaacatca
aaaattacaacagctcaggggccatcataacatggaagctcaaggatatt
cacagagttcgaaaaaaaaaaaaaaacacagggcagcagctgttgttcag
aggagaagccagcaggagggagagccatgctatgttagcctggtgtggtg
gtcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_95262001_95263078
seq2: B6Ng01-326J08.b_49_1127

seq1  GAATTCTGGCTCTGACTCCCATCCCTTACTGGTTATATAAGCTTGGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCTCTGACTCCCATCCCTTACTGGTTATATAAGCTTGGGGCA  50

seq1  GCAATTTCAATGCTCTGGGCCATAGTCTTTCGTTAATTTAAAATGAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTCAATGCTCTGGGCCATAGTCTTTCGTTAATTTAAAATGAGGTA  100

seq1  TTAAACCCACTCGGTCTGTGTTTGTCAGAAGGCCTAAATAAGATATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCCACTCGGTCTGTGTTTGTCAGAAGGCCTAAATAAGATATAATA  150

seq1  CATGTGAAAATGCTACACTGTAAATTTCTAAAGCCAAACAAGGCTTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAAATGCTACACTGTAAATTTCTAAAGCCAAACAAGGCTTGCAG  200

seq1  AAATTACTGCTTTAGTTTGGGGCATTATTGGGAGAACAGAACCATTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTGCTTTAGTTTGGGGCATTATTGGGAGAACAGAACCATTCATT  250

seq1  AGCAACACCGCACTTTCCTATCATTAAATATGTTGTTTGTCCTCTCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACACCGCACTTTCCTATCATTAAATATGTTGTTTGTCCTCTCAAGG  300

seq1  TCTTTATTCATGGATTAAAAATAAATCTGTTATGCATTTTGTTTCAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTCATGGATTAAAAATAAATCTGTTATGCATTTTGTTTCAAAGG  350

seq1  GCATCTGATAAGGCTTTAAAAGTTTAAAACTATAAACTGAATAGTAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGATAAGGCTTTAAAAGTTTAAAACTATAAACTGAATAGTAAAAG  400

seq1  GAGCAACTGAAAGTTAATGGAGCAGGACTTGTCAGGAGAGAGAGAGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTGAAAGTTAATGGAGCAGGACTTGTCAGGAGAGAGAGAGACTA  450

seq1  TATGCTGAATTCGAGATAACATCCATCTCATTTGCAAGGAGGAAATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGAATTCGAGATAACATCCATCTCATTTGCAAGGAGGAAATCTCT  500

seq1  AACCCTCAGAATTATGCTAGAAATTTCCCAAGGGGTTGATTGGTACAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCAGAATTATGCTAGAAATTTCCCAAGGGGTTGATTGGTACAATG  550

seq1  CCCATGGTTTGATTAAATTCTTCACAGGACTTTTGGCCATGGGCACCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTTTGATTAAATTCTTCACAGGACTTTTGGCCATGGGCACCCAA  600

seq1  GGTTCCGGAACAATTATGATTAAAAAAATTTACTCATGCCAAGTCAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCGGAACAATTATGATTAAAAAAATTTACTCATGCCAAGTCAGTTA  650

seq1  CAGGAGCAAGAGCTCCTGCCCCAAGTTTAGCCTGGTGGGATGATGCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAAGAGCTCCTGCCCCAAGTTTAGCCTGGTGGGATGATGCCTGC  700

seq1  GATTTAGTCTTTCACATAGCAAAGTAACACAGTCTCCCTTTGGGGTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGTCTTTCACATAGCAAAGTAACACAGTCTCCCTTTGGGGTCCTC  750

seq1  TGACTCACTGTGCATCTAGATTATTAGGCTACTCATGCTTAAACAGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACTGTGCATCTAGATTATTAGGCTACTCATGCTTAAACAGTTCA  800

seq1  TCCTCTTGAGTATTTCTGAACTGTTTGCTTCCACGGTCAGGGTTAGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGAGTATTTCTGAACTGTTTGCTTCCACGGTCAGGGTTAGGGTT  850

seq1  AGGGTTAGGGTTAGGATTAGTGGGCTCCTCGAGAGTTTAAACCCATATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAGGGTTAGGATTAGTGGGCTCCTCGAGAGTTTAAACCCATATTC  900

seq1  TTAAAATACAGCTC-TGCAGTGGAC-AGTTTAGAAAGTGGCCTAGCCTCC  948
       ||||||||||||| |||||||||| |||||||||||||||| |||||||
seq2  CTAAAATACAGCTCTTGCAGTGGACTAGTTTAGAAAGTGGCCAAGCCTCC  950

seq1  TCAC-CAAGGTAGAATTCTGAACAGGAAGGACCTATCCAGGTTCCCTTTC  997
      |||| |||||||| ||||||| || ||| |||||||||||||||||||||
seq2  TCACTCAAGGTAG-ATTCTGACCA-GAAAGACCTATCCAGGTTCCCTTTC  998

seq1  TGGCTTTTAAAGTTCGGCAAGATACAGTGTGATGGG-TTGTCATCTGTTG  1046
      ||||||||||||||| ||||||| |||||||||||| ||| |||||||||
seq2  TGGCTTTTAAAGTTC-GCAAGATTCAGTGTGATGGGTTTGACATCTGTTG  1047

seq1  GGGAGAAATACTTGATGTGATTGCTTAACTTC  1078
      |||| ||||||||||||||||||||| |||||
seq2  GGGAAAAATACTTGATGTGATTGCTTTACTTC  1079


seq1: chr10_95366885_95367995
seq2: B6Ng01-326J08.g_64_1169 (reverse)

seq1  TCTGACCACCACACCA-GCTTACATAGCATGGCTCTCCCTTCTTGCCTGC  49
      |||||||||||||||| ||| ||||||||||||||||||| ||   ||| 
seq2  TCTGACCACCACACCAGGCTAACATAGCATGGCTCTCCCTCCT--GCTGG  48

seq1  CTTCTCCTCTGGACAACAGCTTGCTTGCCCTGTG-TTTTTTTTTTTTTTC  98
      ||||||||||| |||||||| ||| ||||||||| |||||||||||||||
seq2  CTTCTCCTCTGAACAACAGC-TGC-TGCCCTGTGTTTTTTTTTTTTTTTC  96

seq1  GAACTCTGTTGAAATTATCCTTGAGCTTCCATGTTATGGATGGCCCTGGA  148
      |||||||| ||||  |||||||||||||||||||||| ||||||||  ||
seq2  GAACTCTG-TGAA--TATCCTTGAGCTTCCATGTTAT-GATGGCCCCTGA  142

seq1  GCTGTTGTA--TTTTGATGTTAGTTCTGCTTTCCCTGGAGGAGCTGTCTG  196
      |||||||||  ||||||||||||||||||||| |||||||||||||||||
seq2  GCTGTTGTAATTTTTGATGTTAGTTCTGCTTT-CCTGGAGGAGCTGTCTG  191

seq1  GAATGAGGACTGAGTCACATACTCAGGTGACTTCTTATGAACCATCTCCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGACTGAGTCACATACTCAGGTGACTTCTTATGAACCATCTCCT  241

seq1  AATGAATAAAGGAATCAATCACTAGGCAAGTATTGGGGGACTTCCGGGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAAAGGAATCAATCACTAGGCAAGTATTGGGGGACTTCCGGGTT  291

seq1  GGATGGAGGAAGAGAGGAAGCAGGAGAGAGTTAGGGGCTTTTTGGACAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGGAAGAGAGGAAGCAGGAGAGAGTTAGGGGCTTTTTGGACAGT  341

seq1  GTTAGTGAGAGGGCAACATGTAGCTATTAGTGTTTCCGGTTTGATTTGGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGAGAGGGCAACATGTAGCTATTAGTGTTTCCGGTTTGATTTGGC  391

seq1  ATCGGAGGATTTATATTTAATATGGTTTACAAGATTGGGATTCTCGTTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGAGGATTTATATTTAATATGGTTTACAAGATTGGGATTCTCGTTGT  441

seq1  TGTGCCATTGTTTCTGAACTAAGTTTGTGTGGCATTTTCCTTCATGCAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCATTGTTTCTGAACTAAGTTTGTGTGGCATTTTCCTTCATGCAGT  491

seq1  GGATCAACTGGGTTTAAGAGAGAAAGGTATGGAGACAAAGCGTGGGTTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAACTGGGTTTAAGAGAGAAAGGTATGGAGACAAAGCGTGGGTTTG  541

seq1  CCAGATGTACACTGCAAAGGCCGTGGGAAGCATGGGGCAGGCATAGTAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTACACTGCAAAGGCCGTGGGAAGCATGGGGCAGGCATAGTAGC  591

seq1  AACCCATCAGTGGGAACTTAGCAAGCTGGGTGGAGAGATTTTGGAGCTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATCAGTGGGAACTTAGCAAGCTGGGTGGAGAGATTTTGGAGCTCT  641

seq1  GAGTCAGAAATTCTCCACAAGATAAGAACTGGCTGGCAAGACGGCCGGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAAATTCTCCACAAGATAAGAACTGGCTGGCAAGACGGCCGGGG  691

seq1  CTGAGAATAGCTGGGTGAAGAACTGGAACTTGCCGTTCTTTTTACTATTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATAGCTGGGTGAAGAACTGGAACTTGCCGTTCTTTTTACTATTT  741

seq1  CCCACAACAATTCCATTTTAGTTTCTTTTAAAATTCTTTTACTAATAACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAACAATTCCATTTTAGTTTCTTTTAAAATTCTTTTACTAATAACA  791

seq1  TTAAGAACCCCAAAAGGAGGCCCCAATATTCCCTTTACCACTGTGTCATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAACCCCAAAAGGAGGCCCCAATATTCCCTTTACCACTGTGTCATC  841

seq1  TCACTGTCCCCACATCAGTTATCTTTGCCATTTGGTAATGTGATGTTTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCCCCACATCAGTTATCTTTGCCATTTGGTAATGTGATGTTTTC  891

seq1  TCGTGTGCTTTCTGATCATTTTATTTTCCTTCCCTCATTCATGTCATTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTGCTTTCTGATCATTTTATTTTCCTTCCCTCATTCATGTCATTTT  941

seq1  CCTGCCTTTCACAAAGGCTATCTTTCTGAAGGTTGATTGTGAAAAGCACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTTTCACAAAGGCTATCTTTCTGAAGGTTGATTGTGAAAAGCACA  991

seq1  GTAGCCCATTAGAGAATAATAGTACCTGATGGTTATCTTTCTCTGTGTAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCATTAGAGAATAATAGTACCTGATGGTTATCTTTCTCTGTGTAG  1041

seq1  CTGAAGCTGGCCAAGGATTTATAATCTCCCTGTCTCCAATCACTAGAATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTGGCCAAGGATTTATAATCTCCCTGTCTCCAATCACTAGAATG  1091

seq1  ACAGGCATGGAATTC  1111
      |||||||||||||||
seq2  ACAGGCATGGAATTC  1106


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