BAC Information

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BAC

Clone NameB6Ng01-326L10
Chromosome10 (Build37)
Map Location 106,879,047 - 106,975,197
singlet/doubletdoublet
Overlap geneMyf5, Myf6, Ptprq
Upstream genePpfia2, Olfr1556-ps1, 8430416H19Rik, Lin7a
Downstream geneEG628870, Ppp1r12a, Pawr, EG667814, Syt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326L10.bB6Ng01-326L10.g
ACCGA114455GA114456
length1,1891,139
definitionB6Ng01-326L10.b B6Ng01-326L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,973,962 - 106,975,197)(106,879,047 - 106,880,188)
sequence
gaattcaagagaaactcaagcaacttactcagaccctaccttgatttcta
aaatggtcttaaaaagaactgggacagtagttcattgatagaaggtttca
aaacatgcatacacctagtgctccaataaaaacaaacaaacaactgcaca
aatgaataaacatattaaagaaatttctacaggtcttgagaaatgctaat
ttagaggagactataatcccataagtaatttaaacaggaaaacaaaacaa
aacaaaaaaaaaccaacaaaacaaaacaaaaaaccacagggtgatactaa
aggataaattattcagaaaggcaaccagatttagaggactgcgatatcag
aggctatgacccacacaaccttgcagtgtccaggaagcagaatagaaaga
agaacaaatagcattaactcctggagattctttctgcaacaaaataaatc
ataaggaaatgacttcagcagcaagaggagaaacccgtgggatgacaagt
accgtatatgactgatagtctctaaatgtctgaagtcatgacctttctca
gcatgctttctattctaactttaagaacattcacttgtgttgggcacacc
ttaagtttaagtgggcatgcccatgttgctagatgtgtttccactacatt
tctttgagactgcttgcagcatgcttatcggggtaacactctttgtaaat
aaatattatattcctatccaaaggccactaccatgagttcacgaatgttg
atgtctagttgcattatgagggactgatttgcaatgtgtcaacatgtgta
aagtaactcaaataagtctaaggcattttgaacttaaagtatgaaaattt
gagttcttgggtgctattgtttcatccatttggaatgaggtcttgggtaa
ttatcctcattctatcagaaagaaattcaatccatacccatattactttt
atgatgagacaggccagagtatctgatggttataatgtcacctcaacaca
ggatctaatgcctcaagcctcgtctgggttagataaaatataactctgga
gtattctcttttgtgctggtgtctctttgtgacacaccagcattgtctgt
ctgatccttctagacatagaggattccgagaatccactaataccttatcc
atctgaccttaggattcagcgtgtggtgtgttatcaata
gaattcattaaaatgccttacactttgcaaactgtgtggaaatgtaagat
gatgtgaaagcccaatgtggaccctgtaggcaacccggaggaagcagatg
gagggtagacattgtctcatcaggaatcctatcccgctgctcctggggta
aaggtttcagtaacttgctgttgccttggaaaatagtgggtttctaaatt
gatgactgtgttcaaggaacaaaaacacagcagacaagaagaagacagaa
gttgaagagatagctttccaaatagtggttaaaccctgaacagtacccat
tccgcttagaaactgagcattaaaatagagactagggggccagagaaata
tggctggggacacaaaggctctcactgtcaagcctggccacttgagttca
ggtcccaggatgtatgtagaggaaggaaggagcagactctggcaagctgt
cttctgatatccacattcattccttgacataagccaacatgtgcatgtac
acacacactcacatatgcatagtatataaatcaatggaacaaattttatg
tggaaaaattagagaatgttaccagtcgttgcagaaggaggcccattgct
tccttgtggtacatgtgcttatccagtgggtgcacaaaaataagaacaaa
caaaagccagaaaatcttgcccttataaatacaaacattggcaaagtatc
cttacagatccagaaataaatattaaatttccttttctactgcattattt
cttaacaattagatcaattgtttagatcatactagaaattatgtgaatag
aaatggttctgtataagatattatcagagcgacacttagagagtatcaac
agaataaatagaataatggtttaatttatggtaagacatgctctctaaaa
aaaatttgaaggaatgcatgctgaatgtgaatttaaaatcattttagtgg
agcccttgaacggtgagctttaggtgcatattttttctctaaccaccagg
agcagacgagttgccttgaaagaaagctcgtccattcattacttaatgac
agaaaatactaatagtaagcatggataatctaatgttctcttttcattag
aaaggaagatgctcttgacaagtctaacatcgctcacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106973962_106975197
seq2: B6Ng01-326L10.b_50_1238 (reverse)

seq1  TATTGATTACACACCACAAAGGCTGAATTCTTTATGTGTTCTAGTAGTGG  50
      ||||||| |||||||||  | |||||| || | | ||     ||   |||
seq2  TATTGATAACACACCAC--ACGCTGAA-TCCTAAGGT----CAG--ATGG  41

seq1  ATAAGGTGATTTAAGTGGTGATTCTTCTGAATCTTCTAATGGTCTTAGGA  100
      ||||||| |||  ||||  ||||| || ||||| ||||   ||| ||| |
seq2  ATAAGGT-ATT--AGTG--GATTC-TCGGAATCCTCTA--TGTC-TAGAA  82

seq1  GGATCAGACAGACAAATGGTTTGTTGGTG-GTCACAAAGAGACACAGCCA  149
      |||||||||||||||      || ||||| |||||||||||||||   ||
seq2  GGATCAGACAGACAA------TGCTGGTGTGTCACAAAGAGACACCAGCA  126

seq1  CAAAAGAGAATTACTTCCCAGGAAGTTTTATTATTTTTATCTTAACCCCA  199
      |||||||||| ||||  ||||  |||| ||    ||||||| ||||||  
seq2  CAAAAGAGAA-TACT--CCAG--AGTTATA----TTTTATC-TAACCC--  164

seq1  GGACGGAGGCTTGAGGCATTTAGGATCCTTGTTGTTTTGAGGTTGAACAT  249
       ||| |||||||||||||||   |||||    ||| |||||||   ||| 
seq2  AGAC-GAGGCTTGAGGCATT--AGATCC----TGTGTTGAGGT--GACA-  204

seq1  TTATAACCATCAGATACTCTTGGCCTGTCTCATCATAAAAGTAATATGGG  299
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTATAACCATCAGATACTC-TGGCCTGTCTCATCATAAAAGTAATATGGG  253

seq1  TATGGATTGAATTTTCTTTCTGATAGAATGAGGATAATTACCCAAGACCT  349
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATGGATTGAA-TTTCTTTCTGATAGAATGAGGATAATTACCCAAGACCT  302

seq1  CATTCCAAATGGATGAAACAATAGCACCCAAGAACTCAAATTTTCATACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAATGGATGAAACAATAGCACCCAAGAACTCAAATTTTCATACT  352

seq1  TTAAGTTCAAAATGCCTTAGACTTATTTGAGTTACTTTACACATGTTGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTCAAAATGCCTTAGACTTATTTGAGTTACTTTACACATGTTGAC  402

seq1  ACATTGCAAATCAGTCCCTCATAATGCAACTAGACATCAACATTCGTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCAAATCAGTCCCTCATAATGCAACTAGACATCAACATTCGTGAA  452

seq1  CTCATGGTAGTGGCCTTTGGATAGGAATATAATATTTATTTACAAAGAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTAGTGGCCTTTGGATAGGAATATAATATTTATTTACAAAGAGT  502

seq1  GTTACCCCGATAAGCATGCTGCAAGCAGTCTCAAAGAAATGTAGTGGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCCGATAAGCATGCTGCAAGCAGTCTCAAAGAAATGTAGTGGAAA  552

seq1  CACATCTAGCAACATGGGCATGCCCACTTAAACTTAAGGTGTGCCCAACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTAGCAACATGGGCATGCCCACTTAAACTTAAGGTGTGCCCAACA  602

seq1  CAAGTGAATGTTCTTAAAGTTAGAATAGAAAGCATGCTGAGAAAGGTCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAATGTTCTTAAAGTTAGAATAGAAAGCATGCTGAGAAAGGTCAT  652

seq1  GACTTCAGACATTTAGAGACTATCAGTCATATACGGTACTTGTCATCCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGACATTTAGAGACTATCAGTCATATACGGTACTTGTCATCCCA  702

seq1  CGGGTTTCTCCTCTTGCTGCTGAAGTCATTTCCTTATGATTTATTTTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTCTCCTCTTGCTGCTGAAGTCATTTCCTTATGATTTATTTTGTT  752

seq1  GCAGAAAGAATCTCCAGGAGTTAATGCTATTTGTTCTTCTTTCTATTCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGAATCTCCAGGAGTTAATGCTATTTGTTCTTCTTTCTATTCTG  802

seq1  CTTCCTGGACACTGCAAGGTTGTGTGGGTCATAGCCTCTGATATCGCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGACACTGCAAGGTTGTGTGGGTCATAGCCTCTGATATCGCAGT  852

seq1  CCTCTAAATCTGGTTGCCTTTCTGAATAATTTATCCTTTAGTATCACCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAATCTGGTTGCCTTTCTGAATAATTTATCCTTTAGTATCACCCT  902

seq1  GTGGTTTTTTGTTTTGTTTTGTTGGTTTTTTTTTGTTTTGTTTTGTTTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTTTGTTTTGTTTTGTTGGTTTTTTTTTGTTTTGTTTTGTTTTC  952

seq1  CTGTTTAAATTACTTATGGGATTATAGTCTCCTCTAAATTAGCATTTCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAATTACTTATGGGATTATAGTCTCCTCTAAATTAGCATTTCTC  1002

seq1  AAGACCTGTAGAAATTTCTTTAATATGTTTATTCATTTGTGCAGTTGTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGTAGAAATTTCTTTAATATGTTTATTCATTTGTGCAGTTGTTT  1052

seq1  GTTTGTTTTTATTGGAGCACTAGGTGTATGCATGTTTTGAAACCTTCTAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTATTGGAGCACTAGGTGTATGCATGTTTTGAAACCTTCTAT  1102

seq1  CAATGAACTACTGTCCCAGTTCTTTTTAAGACCATTTTAGAAATCAAGGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACTACTGTCCCAGTTCTTTTTAAGACCATTTTAGAAATCAAGGT  1152

seq1  AGGGTCTGAGTAAGTTGCTTGAGTTTCTCTTGAATTC  1236
      |||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGAGTAAGTTGCTTGAGTTTCTCTTGAATTC  1189

seq1: chr10_106879047_106880188
seq2: B6Ng01-326L10.g_67_1205

seq1  GAATTCATTAAAATGCCTTACACTTTGCAAACTGTGTGGAAATGTAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAATGCCTTACACTTTGCAAACTGTGTGGAAATGTAAGAT  50

seq1  GATGTGAAAGCCCAATGTGGACCCTGTAGGCAACCCGGAGGAAGCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAAAGCCCAATGTGGACCCTGTAGGCAACCCGGAGGAAGCAGATG  100

seq1  GAGGGTAGACATTGTCTCATCAGGAATCCTATCCCGCTGCTCCTGGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTAGACATTGTCTCATCAGGAATCCTATCCCGCTGCTCCTGGGGTA  150

seq1  AAGGTTTCAGTAACTTGCTGTTGCCTTGGAAAATAGTGGGTTTCTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCAGTAACTTGCTGTTGCCTTGGAAAATAGTGGGTTTCTAAATT  200

seq1  GATGACTGTGTTCAAGGAACAAAAACACAGCAGACAAGAAGAAGACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTGTGTTCAAGGAACAAAAACACAGCAGACAAGAAGAAGACAGAA  250

seq1  GTTGAAGAGATAGCTTTCCAAATAGTGGTTAAACCCTGAACAGTACCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGAGATAGCTTTCCAAATAGTGGTTAAACCCTGAACAGTACCCAT  300

seq1  TCCGCTTAGAAACTGAGCATTAAAATAGAGACTAGGGGGCCAGAGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTTAGAAACTGAGCATTAAAATAGAGACTAGGGGGCCAGAGAAATA  350

seq1  TGGCTGGGGACACAAAGGCTCTCACTGTCAAGCCTGGCCACTTGAGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGGGACACAAAGGCTCTCACTGTCAAGCCTGGCCACTTGAGTTCA  400

seq1  GGTCCCAGGATGTATGTAGAGGAAGGAAGGAGCAGACTCTGGCAAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAGGATGTATGTAGAGGAAGGAAGGAGCAGACTCTGGCAAGCTGT  450

seq1  CTTCTGATATCCACATTCATTCCTTGACATAAGCCAACATGTGCATGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATATCCACATTCATTCCTTGACATAAGCCAACATGTGCATGTAC  500

seq1  ACACACACTCACATATGCATAGTATATAAATCAATGGAACAAATTTTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACTCACATATGCATAGTATATAAATCAATGGAACAAATTTTATG  550

seq1  TGGAAAAATTAGAGAATGTTACCAGTCGTTGCAGAAGGAGGCCCATTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAATTAGAGAATGTTACCAGTCGTTGCAGAAGGAGGCCCATTGCT  600

seq1  TCCTTGTGGTACATGTGCTTATCCAGTGGGTGCACAAAAATAAGAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGGTACATGTGCTTATCCAGTGGGTGCACAAAAATAAGAACAAA  650

seq1  CAAAAGCCAGAAAATCTTGCCCTTATAAATACAAACATTGGCAAAGTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCAGAAAATCTTGCCCTTATAAATACAAACATTGGCAAAGTATC  700

seq1  CTTACAGATCCAGAAATAAATATTAAATTTCCTTTTCTACTGCATTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGATCCAGAAATAAATATTAAATTTCCTTTTCTACTGCATTATTT  750

seq1  CTTAACAATTAGATCAATTGTTTAGATCATACTAGAAATTATGTGAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAATTAGATCAATTGTTTAGATCATACTAGAAATTATGTGAATAG  800

seq1  AAATGGTTCTGTATAAGATATTATCAGAGCGACACTTAGAGAGTATCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTCTGTATAAGATATTATCAGAGCGACACTTAGAGAGTATCAAC  850

seq1  AGAATAAATAGAATAATGGTTTAATTTATGGTAAGACATGCTCTCT-AAA  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGAATAAATAGAATAATGGTTTAATTTATGGTAAGACATGCTCTCTAAAA  900

seq1  AAAATTTGAAGGAATGCATGCTGAATGTGAATTTAAAATCATTTTAGTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGAAGGAATGCATGCTGAATGTGAATTTAAAATCATTTTAGTGG  950

seq1  AG-CCTTGAACGGTGAGCTTTAGGGTGCA-ATATTTTCTCTAACCACCAG  997
      || ||||||||||||||||||| |||||| || |||||||||||||||| 
seq2  AGCCCTTGAACGGTGAGCTTTA-GGTGCATATTTTTTCTCTAACCACCA-  998

seq1  GGAGCAGACGAG-TGCCTTGAAAGAAAGGCTCGT-CAATCATTACTAAAT  1045
      |||||||||||| |||||||||||||| |||||| || |||||||| |||
seq2  GGAGCAGACGAGTTGCCTTGAAAGAAA-GCTCGTCCATTCATTACTTAAT  1047

seq1  GACAGGAAAAATAATAAATAGTAGGCATGGATAACCCAATG-TCTCTTTC  1094
      |||||  |||||| | ||||||| |||||||||| | |||| ||||||| 
seq2  GACAG--AAAATACT-AATAGTAAGCATGGATAATCTAATGTTCTCTTTT  1094

seq1  ATTTAGAAAGAAAGATTCTCCTTGACAAAGTCTAACATCCCCTCACAA  1142
        |||||||| ||||| || |||||| ||||||||||| | |||||||
seq2  CATTAGAAAGGAAGATGCT-CTTGAC-AAGTCTAACAT-CGCTCACAA  1139