BAC Information

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BAC

Clone NameB6Ng01-326N10
Chromosome10 (Build37)
Map Location 104,169,804 - 104,170,991
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326N10.bB6Ng01-326N10.g
ACCGA114546GA114547
length1,1661,122
definitionB6Ng01-326N10.b B6Ng01-326N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcaataaaaatctattaattttgtatagattatcacatccaa
tttgaaactgaatcataaggattctttggcttgtgaattcatcacctata
attttccacatttagaagttttatatgtttgtttcactgtctttgtccat
aactaggttggcttataatttgactatactgatttttaggaaaagaacct
taaatttttctaggatatatttaggtttatatttttatgtttcaacaata
ataattattactatgactttgcatttcttttatttgatttttttaaattt
tatttaatctatttttacagtccagattttatccccgtcctggtccaccc
tctgactgttccacatcccttacctcccccactgcatatctaggaggatg
ttcctccaaccccctatcccaccagactcccctgctctctggggccttca
gtctctgtctgagtccagccctggcagactctgctgtatatgtgttgggg
acctcataatagctgatgtatgctgcctggtttgtgacccaatatctgag
atatctcaggggtccaggttaattgagatttctatactgatttatttcta
acacttgaatcaggtggtttattctcttagtttgcgtataatatatgagc
tctttattatgacctcagtgctgttttatgctgttgtatttttttttatc
tttctatattttggtttaatttccagtttaatagaaaattattttgaaaa
agttttactaatttccatttgacaaaatatccagcatcctaatttgagtg
ttttcctctttactcacatacgagtacctgcacaacacttaggttttatg
acttaggggtatttttgtcatgaagattttaaacatgattttcttatgca
aacgtgagggagatattttgccttctttctactcatatggagttcaatat
attttgatgaatcagttttattcttgtactcattatattttattctttgc
tttgatatatttctatgatgattatactatcagtttactggctaatcttg
ttgtcaacagattggatgaaaattctgatgagattagttttgaatattgt
ctatgacagcatttcagaatttagtcatggagctctgtcattcattatga
tacaattgaataggtg

gaattcaaggccagatttatacagagcaagttccaggcaaagaaaagctt
atgtccaaatgtggtggtatacacctttaatcccagcactcaggagacaa
agccatgcagatctctaagtacaaagtcaatctacagagcaagttccaca
acagccaaacttaggcagtgaaggagctggaaaacagaaagctgacgata
atgtgagagaacaaggggggagtgttgtaaatccagcaagcagtagaact
ctacagcttcagccatgtggctctggctttagagttaatgatagaaggga
ctactgagaaaattgatgctggttatctgaagctaagaaatttgtgctga
ttaagaagataccagcatcactgtggaagtgatgatctgggaagttcttt
ctgacagcacaaagaagccatgttccagaggtagccaaggttgtacctca
tgctccatctgtacttggtaatgtgaaagattcacccaggtggttggttt
tgaaggcatgaaggggtcataaagagcagctgaggcttggcactatgaga
ggccaggggaggtcattgaagaaggtacagctgcagtggcagttgatgtc
ccaggactgaagaagttgagacttggcaccctaaagggagcaagtgtcta
ttggcgaagcctagttgcagcagaatacctgaatgtattataaatgccag
taccatgggatgacaaccaagaatagcagcagtggagtggagtcaatgag
agcctagagtgctacagaggacagagctggagaaatggcccaagcccttt
ggagaagcccagaaaaatcatgtgcgggacccacacattggaacaagaag
tcgtgaagttggcattctcttggattccccaagattttagagatgccaga
gccttgggatacatccctgagaaaagctgctaaagatttgtagaaccagc
ctaagagaaaggatatgttttgcagtcacaagaacaaagaagcttggaga
tatgaagagtgctttgacctcagagatggaggaggagttgcagtttgcca
tctgtttagtgtcagccattatcatgatgacttttcaaggtgtaatgtat
tcctcgggtaagtctgggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104169804_104170991
seq2: B6Ng01-326N10.b_51_1216 (reverse)

seq1  CACCTATTCAAATTGTATTCCATTAATGAATGAAACAGAGCCTTCATGAA  50
      ||||||||| ||||||||  || |||||||||  |||||| || |||| |
seq2  CACCTATTC-AATTGTAT--CA-TAATGAATG--ACAGAG-CTCCATG-A  42

seq1  CTAAATTTCCTTGGAAATGCTGTCATAGAC-ATATTCCAAACTATACTTC  99
      |||||||  ||  ||||||||||||||||| |||||| |||||| |  ||
seq2  CTAAATT--CT--GAAATGCTGTCATAGACAATATTCAAAACTA-ATCTC  87

seq1  ATCAGAATTTTTCATTCCAATCTGGTTGACAACAAGATTAGCCAGTAAAC  149
      ||||||| |||||| |||||||| ||||||||||||||||||||||||||
seq2  ATCAGAA-TTTTCA-TCCAATCT-GTTGACAACAAGATTAGCCAGTAAAC  134

seq1  TGGATAGTAATAATCATCATAGAAATAATATTCAAAAGCAAAGAAATAAA  199
      | |||||| ||||||||||||||||| ||||   ||||||||| ||||||
seq2  T-GATAGT-ATAATCATCATAGAAAT-ATAT--CAAAGCAAAG-AATAAA  178

seq1  ATATAATGAGTACAAGAAATAAAACTGATTTCATCAAAATATATTGAACT  249
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  ATATAATGAGTACAAG-AATAAAACTGA-TTCATCAAAATATATTGAACT  226

seq1  CCATATGAGTAGAAAGAAGGCAAAATATCTCCCTCACGTTTGCATAAG-A  298
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCATATGAGTAGAAAGAAGGCAAAATATCTCCCTCACGTTTGCATAAGAA  276

seq1  AATCATGTTTAAAATCTTCATGACAAAAATACCCCTAAGTCATAAAACCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTTTAAAATCTTCATGACAAAAATACCCCTAAGTCATAAAACCT  326

seq1  AAGTGTTGTGCAGGTACTCGTATGTGAGTAAAGAGGAAAACACTCAAATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGTGCAGGTACTCGTATGTGAGTAAAGAGGAAAACACTCAAATT  376

seq1  AGGATGCTGGATATTTTGTCAAATGGAAATTAGTAAAACTTTTTCAAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTGGATATTTTGTCAAATGGAAATTAGTAAAACTTTTTCAAAAT  426

seq1  AATTTTCTATTAAACTGGAAATTAAACCAAAATATAGAAAGATAAAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTATTAAACTGGAAATTAAACCAAAATATAGAAAGATAAAAAAA  476

seq1  AATACAACAGCATAAAACAGCACTGAGGTCATAATAAAGAGCTCATATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAACAGCATAAAACAGCACTGAGGTCATAATAAAGAGCTCATATAT  526

seq1  TATACGCAAACTAAGAGAATAAACCACCTGATTCAAGTGTTAGAAATAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGCAAACTAAGAGAATAAACCACCTGATTCAAGTGTTAGAAATAAA  576

seq1  TCAGTATAGAAATCTCAATTAACCTGGACCCCTGAGATATCTCAGATATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATAGAAATCTCAATTAACCTGGACCCCTGAGATATCTCAGATATT  626

seq1  GGGTCACAAACCAGGCAGCATACATCAGCTATTATGAGGTCCCCAACACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACAAACCAGGCAGCATACATCAGCTATTATGAGGTCCCCAACACA  676

seq1  TATACAGCAGAGTCTGCCAGGGCTGGACTCAGACAGAGACTGAAGGCCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGCAGAGTCTGCCAGGGCTGGACTCAGACAGAGACTGAAGGCCCC  726

seq1  AGAGAGCAGGGGAGTCTGGTGGGATAGGGGGTTGGAGGAACATCCTCCTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCAGGGGAGTCTGGTGGGATAGGGGGTTGGAGGAACATCCTCCTA  776

seq1  GATATGCAGTGGGGGAGGTAAGGGATGTGGAACAGTCAGAGGGTGGACCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCAGTGGGGGAGGTAAGGGATGTGGAACAGTCAGAGGGTGGACCA  826

seq1  GGACGGGGATAAAATCTGGACTGTAAAAATAGATTAAATAAAATTTAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGGGGATAAAATCTGGACTGTAAAAATAGATTAAATAAAATTTAAAA  876

seq1  AAATCAAATAAAAGAAATGCAAAGTCATAGTAATAATTATTATTGTTGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAATAAAAGAAATGCAAAGTCATAGTAATAATTATTATTGTTGAA  926

seq1  ACATAAAAATATAAACCTAAATATATCCTAGAAAAATTTAAGGTTCTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAATATAAACCTAAATATATCCTAGAAAAATTTAAGGTTCTTTT  976

seq1  CCTAAAAATCAGTATAGTCAAATTATAAGCCAACCTAGTTATGGACAAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAATCAGTATAGTCAAATTATAAGCCAACCTAGTTATGGACAAAG  1026

seq1  ACAGTGAAACAAACATATAAAACTTCTAAATGTGGAAAATTATAGGTGAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAACAAACATATAAAACTTCTAAATGTGGAAAATTATAGGTGAT  1076

seq1  GAATTCACAAGCCAAAGAATCCTTATGATTCAGTTTCAAATTGGATGTGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGCCAAAGAATCCTTATGATTCAGTTTCAAATTGGATGTGA  1126

seq1  TAATCTATACAAAATTAATAGATTTTTATTGAATGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATACAAAATTAATAGATTTTTATTGAATGAATTC  1166


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