BAC Information

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BAC

Clone NameB6Ng01-327B06
Chromosome10 (Build37)
Map Location 71,805,656 - 71,806,717
singlet/doubletsinglet
Overlap genenone
Upstream geneZcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
Downstream geneZwint, LOC432471, LOC544705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327B06.bB6Ng01-327B06.g
ACCGA114717GA114718
length1,2211,082
definitionB6Ng01-327B06.b B6Ng01-327B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagaaaaatgcaaatcaaaacaaaactgatgt
tccatctcacaccagtaagaatggctaagaacaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggattccacaatacctctcctgggc
atatatccaaaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatgtataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtccatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatagacctggagggcatcatcctgagtgaggtaacacaatcacaa
aagagctcaaatgatatgtactcactgataagtggatattagcccagaaa
cttagtatacccgagatataagatacaatttgcaaaacacatgaaactga
agaagaaggaagaccaaagtgtggacactttgccccttcttagaattgga
aacaattactcatggaaggagttagagtgacaaagtttggagctgagaca
aaaaaggatgggccatctagagactgccatatccagggatccatcccata
attagcctcaaaatgatgacaccattgcatatactagcaagcgttggctg
aaaggaccctgatatagctctctcttgtgagactaggccggggcctagca
aacacagaagtggatgctcacagtcagctattggatggatcacagggccc
ccaatggaggagctagagaaagtatccaaggagctcagagatctgcaacc
ctgtaggtgcaacacattatgaactaccagtaccccagagctctgactct
actgcataatgtatcaaaagatgcctagtggcccatcactggaaagagag
gccattggacaggcagaactttatatgcctagttacaggggaaatgccag
gacaaaattgcaatgggttgggctatggacaatgtggtgggtataaacca
gagtgacgtagacgtagatct
gaattcacttaaagaagagagctagggagagtctctaaatataattatat
cttaagatgatctggaggatattgggctgcaaccaactctcagatttttc
ttcctttgaagccttcttccactttaaaactcaaagtaattgaatgtttc
ctcatgtataaaaatatggaggctgaatataagaaagtgaaaaaaagatt
aaaaaatggaaaatgaatgattttttaagatgttgtgagagattcgattg
ctgaaagaaattttcagtatatttttgtgattacataaaatttaggacca
agaaaggcttaaccaggtagggtgtatttcagatatgactgcaaattctt
ggatcatttttagttatattgcagactatgtcactacaataaagtggttt
acttaaaagtttcactatctaattctataaaacaattcaaaattatggag
gaatagagaagaaaacaaaagctttttacctggccaaaagaaacactgta
agatagatgggacccctggaggcagggtggtggtggggagctgagaggaa
gtttaatgactgacccaatcactggagtagactatattttatttttttat
tagatattttcttcatttacatttcaaatgctacccccaaagggcacaca
aacacacacacatacacgcacactcatatacacacacaacaggtgtttca
tttaccactcacaggaagacaagtttgcacacacaaagattacctctttt
cagttatataaatatgatttcatatcataataaaaggtaagatgttaatc
ctgaacacattcaaggtcacaggtccctatagtgtgcataactgggcaca
gattgatccaaaccttgtctccctcgttcttttagctatcttcatccctt
tactttgtattctcctccgataaatctgttgttgcccatgggttcccagc
aatactgccttcaggagtaaaagcatctgtcacatcattcagagcaaagc
tttgtgtggaagaaagccgccttccatgccatccgtaactgaggattgtg
tggttcctggaagggggagtcaatgaattgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71805656_71806717
seq2: B6Ng01-327B06.g_64_1145 (reverse)

seq1  TCCAATTCATTACCTCCAC--TCCAGGAACCAC-CAAT-CTCAG-TAC-G  44
      |||||||||||  |||| |  |||||||||||| |||| ||||| ||| |
seq2  TCCAATTCATTGACTCCCCCTTCCAGGAACCACACAATCCTCAGTTACGG  50

seq1  AT-GCCTG--AAGCGGC-TTCT--CACACAAAGCTTTGCTCTG-ATGATG  87
      || || ||  | ||||| ||||  ||||||||||||||||||| ||||||
seq2  ATGGCATGGAAGGCGGCTTTCTTCCACACAAAGCTTTGCTCTGAATGATG  100

seq1  TGACAGATGC-TTTACTCTGGA--GCAGTATTGCTGGGAA-CCATGGGC-  132
      |||||||||| |||||||  ||  |||||||||||||||| |||||||| 
seq2  TGACAGATGCTTTTACTCCTGAAGGCAGTATTGCTGGGAACCCATGGGCA  150

seq1  ACAACAGATTTATCGGAGGAGAATACAAAGTAAAGGGATGAAGATAGCTA  182
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGATTTATCGGAGGAGAATACAAAGTAAAGGGATGAAGATAGCTA  200

seq1  AAAGAACGAGGGAGACAAGGTTTGGATCAATCTGTG-CCAGTTATGCACA  231
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGAACGAGGGAGACAAGGTTTGGATCAATCTGTGCCCAGTTATGCACA  250

seq1  CTATA-GGACCTGTGACCTTGAATGTGTTCAGGATTAACATCTTACCTTT  280
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGGACCTGTGACCTTGAATGTGTTCAGGATTAACATCTTACCTTT  300

seq1  TATTATGATATGAAATCATATTTATATAACTGAAAAGAGGTAATCTTTGT  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGATATGAAATCATATTTATATAACTGAAAAGAGGTAATCTTTGT  350

seq1  GTGTGCAAACTTGTCTTCCTGTGAGTGGTAAATGAAACACCTGTTGTGTG  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAAACTTGTCTTCCTGTGAGTGGTAAATGAAACACCTGTTGTGTG  400

seq1  TGTATATGAGTGTGCGTGTATGTGTGTGTGTTTGTGTGCCCTTTGGGGGT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGAGTGTGCGTGTATGTGTGTGTGTTTGTGTGCCCTTTGGGGGT  450

seq1  AGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAATAAAATATA  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAATAAAATATA  500

seq1  GTCTACTCCAGTGATTGGGTCAGTCATTAAACTTCCTCTCAGCTCCCCAC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTCCAGTGATTGGGTCAGTCATTAAACTTCCTCTCAGCTCCCCAC  550

seq1  CACCACCCTGCCTCCAGGGGTCCCATCTATCTTACAGTGTTTCTTTTGGC  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCCTGCCTCCAGGGGTCCCATCTATCTTACAGTGTTTCTTTTGGC  600

seq1  CAGGTAAAAAGCTTTTGTTTTCTTCTCTATTCCTCCATAATTTTGAATTG  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAAAAGCTTTTGTTTTCTTCTCTATTCCTCCATAATTTTGAATTG  650

seq1  TTTTATAGAATTAGATAGTGAAACTTTTAAGTAAACCACTTTATTGTAGT  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGAATTAGATAGTGAAACTTTTAAGTAAACCACTTTATTGTAGT  700

seq1  GACATAGTCTGCAATATAACTAAAAATGATCCAAGAATTTGCAGTCATAT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGTCTGCAATATAACTAAAAATGATCCAAGAATTTGCAGTCATAT  750

seq1  CTGAAATACACCCTACCTGGTTAAGCCTTTCTTGGTCCTAAATTTTATGT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATACACCCTACCTGGTTAAGCCTTTCTTGGTCCTAAATTTTATGT  800

seq1  AATCACAAAAATATACTGAAAATTTCTTTCAGCAATCGAATCTCTCACAA  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAAAATATACTGAAAATTTCTTTCAGCAATCGAATCTCTCACAA  850

seq1  CATCTTAAAAAATCATTCATTTTCCATTTTTTAATCTTTTTTTCACTTTC  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAAAAAATCATTCATTTTCCATTTTTTAATCTTTTTTTCACTTTC  900

seq1  TTATATTCAGCCTCCATATTTTTATACATGAGGAAACATTCAATTACTTT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCAGCCTCCATATTTTTATACATGAGGAAACATTCAATTACTTT  950

seq1  GAGTTTTAAAGTGGAAGAAGGCTTCAAAGGAAGAAAAATCTGAGAGTTGG  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTAAAGTGGAAGAAGGCTTCAAAGGAAGAAAAATCTGAGAGTTGG  1000

seq1  TTGCAGCCCAATATCCTCCAGATCATCTTAAGATATAATTATATTTAGAG  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCCCAATATCCTCCAGATCATCTTAAGATATAATTATATTTAGAG  1050

seq1  ACTCTCCCTAGCTCTCTTCTTTAAGTGAATTC  1062
      ||||||||||||||||||||||||||||||||
seq2  ACTCTCCCTAGCTCTCTTCTTTAAGTGAATTC  1082