BAC Information

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BAC

Clone NameB6Ng01-327D06
Chromosome10 (Build37)
Map Location 103,646,507 - 103,647,550
singlet/doubletsinglet
Overlap genenone
Upstream geneLrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327D06.bB6Ng01-327D06.g
ACCGA114813GA114814
length7501,057
definitionB6Ng01-327D06.b B6Ng01-327D06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagcttagttctatacttcattttttgactgggttgtttgggt
ttttggtgattaacttcttgagttctttatatattttggatattagccct
ctatcggatgtggggttactgaagatttttttttccaatctgtagcttgt
cgacaacaaatgttggaaaggatgtagagaaagaggaacactctttcatt
gctggtaggattgcaaactggtacaacgaatctggaaatcaatctggagg
ctcctcagaaaattggaaatagatctacctgaagacccagctataccact
cttgggagtatacccaaaagatgcccccaccatgccatagggccatgtgt
tctactttttccatagagtccttattcatgatagccagaagctagaaaca
acctagatgttccaggacagaacaatggacacagaaactgtggttcattt
actcagctattaagaatgaggacatcctgagtttggcaggcaaatggttg
gaaatagaaaatatcatcctgagtgaggtatctcagacacaaaaagaaat
gcattgtttgtactcactaataattggatgttagccaataaataaataaa
taaataaataaataaataaatgtacagaatacccaagaaatccacagaac
acaaaagggtcaacaagctgaaatgccccagtgaggatgccgcagtccca
cttgagagagagaagaaagctattccaaatggggagggagggagggacct

gaattcaaagttttaaatttacatttgttcagatgaaacaagctgcaaag
ccttatggtttgagtaataaaggcaagggttgaagagatttactatgtag
gacagattagagttcaggaaaagaaataaaatgtgcatgcacatgctttt
atatatgtatgtggtttgtctatgtgcatatattggactattgagacagg
gctggcaggatgcaggttagtttaatggtgtggtggtggttttacattgc
ttaaaactattcagcattaaattttagaaattctttttaatttttttatt
cattgatggtagctttgtctttgattctatatttcttaagcaccttcatg
ttctaatttttaggatagttataaactcagatgtgtaaactttatgaaac
aatattatatatatatatatatatatatatacatatacatatacatatat
atatatatattcaaatatctataccttatttagtaatatttctgaaacat
aagtttatatatggatgacacatgaattacactgaggttttgcctttaaa
atgacattttagtgtgaaaacagtttaagttacacatacatgtgattcat
caaaaataccaaatgccacagttcagccacatggtacatggcagtttctg
ttggcaaccaacatgtttatcttggtgactggggatgtcagcctattctg
ctgccagaatagactgtagctttctaagcatgttagcatattttttataa
ttttaacttttttgaaatatatttttatattacttacatcactaaacata
gttagctatacgtgttagttatgtttctcatctttgcaaatgaattatca
gacattaaaacatttcatgcaacaaaaataaatttgacttgggtttgagt
gaattagccccactatgaaagttacagcatgggtggccaggtacaacttt
tagctgcatggcatgaaggattgcctcctgctttgctcgttatctctgtg
gtaaaaagaaaaatgaagtgccaggtctcatcctggcattccttctttcc
atattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103646507_103647550
seq2: B6Ng01-327D06.g_66_1122 (reverse)

seq1  ATAA-ATGGAAAGGA-GAATGCCA-GATGAGACTTGGCACTTTCATTTTT  47
      |||| |||||||| | |||||||| |||||||| |||||| |||||||||
seq2  ATAATATGGAAAGAAGGAATGCCAGGATGAGACCTGGCAC-TTCATTTTT  49

seq1  C-TTTTACCACAGAGAT-ACGAGC-AAGCAGGAG--CATCC-TCATGCCA  91
      | ||||||||||||||| |||||| |||||||||   |||| ||||||||
seq2  CTTTTTACCACAGAGATAACGAGCAAAGCAGGAGGCAATCCTTCATGCCA  99

seq1  TGCAGCTAAAAGTTGTACCT-GCCA-CCATGCTGTAACTTTCATAGT-GG  138
      |||||||||||||||||||| |||| ||||||||||||||||||||| ||
seq2  TGCAGCTAAAAGTTGTACCTGGCCACCCATGCTGTAACTTTCATAGTGGG  149

seq1  GCTAATTCACTCAAACCCAAGTCAAATTTATTTTTGTTGCATGAAATGTT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTCACTCAAACCCAAGTCAAATTTATTTTTGTTGCATGAAATGTT  199

seq1  TTAATGTCTGAT-ATTCATTTGCAATGATGAGAAACATAACTAACACGTA  237
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  TTAATGTCTGATAATTCATTTGCAAAGATGAGAAACATAACTAACACGTA  249

seq1  TAGCTAACTATGTTTAGTGATGTAAGTAATATAAAAATATATTTCAAAAT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAGCTAACTATGTTTAGTGATGTAAGTAATATAAAAATATATTTCAAAAA  299

seq1  AGTTAAAATTAT-AAAAATATGCTAACATGCTTAGAAAGCTACAGTCTAT  336
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAATTATAAAAAATATGCTAACATGCTTAGAAAGCTACAGTCTAT  349

seq1  TCTGGCAGCAGAATAGGCTGACATCCCCAGTCACCAAGATAAACATGTTG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGCAGAATAGGCTGACATCCCCAGTCACCAAGATAAACATGTTG  399

seq1  GTTGCCAACAGAAACTGCCATGTACCATGTGGCTGAACTGTGGCATTTGG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAACAGAAACTGCCATGTACCATGTGGCTGAACTGTGGCATTTGG  449

seq1  TATTTTTGATGAATCACATGTATGTGTAACTTAAACTGTTTTCACACTAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGATGAATCACATGTATGTGTAACTTAAACTGTTTTCACACTAA  499

seq1  AATGTCATTTTAAAGGCAAAACCTCAGTGTAATTCATGTGTCATCCATAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATTTTAAAGGCAAAACCTCAGTGTAATTCATGTGTCATCCATAT  549

seq1  ATAAACTTATGTTTCAGAAATATTACTAAATAAGGTATAGATATTTGAAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTTATGTTTCAGAAATATTACTAAATAAGGTATAGATATTTGAAT  599

seq1  ATATATATATATATGTATATGTATATGTATATATATATATATATATATAT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATGTATATGTATATGTATATATATATATATATATATAT  649

seq1  ATAATATTGTTTCATAAAGTTTACACATCTGAGTTTATAACTATCCTAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTGTTTCATAAAGTTTACACATCTGAGTTTATAACTATCCTAAA  699

seq1  AATTAGAACATGAAGGTGCTTAAGAAATATAGAATCAAAGACAAAGCTAC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAACATGAAGGTGCTTAAGAAATATAGAATCAAAGACAAAGCTAC  749

seq1  CATCAATGAATAAAAAAATTAAAAAGAATTTCTAAAATTTAATGCTGAAT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGAATAAAAAAATTAAAAAGAATTTCTAAAATTTAATGCTGAAT  799

seq1  AGTTTTAAGCAATGTAAAACCACCACCACACCATTAAACTAACCTGCATC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAGCAATGTAAAACCACCACCACACCATTAAACTAACCTGCATC  849

seq1  CTGCCAGCCCTGTCTCAATAGTCCAATATATGCACATAGACAAACCACAT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGCCCTGTCTCAATAGTCCAATATATGCACATAGACAAACCACAT  899

seq1  ACATATATAAAAGCATGTGCATGCACATTTTATTTCTTTTCCTGAACTCT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATAAAAGCATGTGCATGCACATTTTATTTCTTTTCCTGAACTCT  949

seq1  AATCTGTCCTACATAGTAAATCTCTTCAACCCTTGCCTTTATTACTCAAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTCCTACATAGTAAATCTCTTCAACCCTTGCCTTTATTACTCAAA  999

seq1  CCATAAGGCTTTGCAGCTTGTTTCATCTGAACAAATGTAAATTTAAAACT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGGCTTTGCAGCTTGTTTCATCTGAACAAATGTAAATTTAAAACT  1049

seq1  TTGAATTC  1044
      ||||||||
seq2  TTGAATTC  1057