BAC Information

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BAC

Clone NameB6Ng01-327F09
Chromosome10 (Build37)
Map Location 116,702,941 - 116,704,124
singlet/doubletsinglet
Overlap genenone
Upstream genePtprr, Ptprb, Kcnmb4, Cnot2, LOC668080, EG668091, Gm239, Rab3ip, D630029K05Rik, LOC544741, Best3, Lrrc10, Cct2, Frs2, Yeats4, 9530003J23Rik
Downstream geneLyzs, Lyz, Cpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327F09.bB6Ng01-327F09.g
ACCGA114909GA114910
length1,174214
definitionB6Ng01-327F09.b B6Ng01-327F09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatcccagcaaccacatggtggctcacaaccatccataatgag
atctgatgacctcttctggtgtgtctgaagtcagctacggtgtatttatt
tataataaataaatctttgggtcggagcgaacagggactgatcaagcagg
gttgacctgaatgagcagaggtcctaaattcaattcccagcaaccacatg
aagactcacaaccatctgtacagctacagtgtactcacatacataaagta
aataaatctttaaaaaaaagatttcctctgttaaataagttagcccatta
ctttaaatttttttttatttatatattgtcttacttagggttttactgct
gtgaacagacaccaagaccaaggctactcttctaaggacaacatttaatt
ggggttggcttacatgttcagagcttcagtccagtatcgtcaaggcagga
acatggcaacatccaggcaggcatggtgcaggaggagctgagagttctac
atcttcatctgaaggctgctaggagaatactgacttccaggcagctaaga
tgagggtcttaaagccccaggtgacacacctactccaacaaggccacacc
tcctaatagtgccgccccctgggccaagcatatataaaccatcatatata
tattattcgatttttcatttatttcatgtatatgagtgttttgcctgtgt
gtaagtatgtgcccaatcctcctcagaggtcagagagggtgttgggtccc
ctggagccaattatagatagttgtgagtctccatgtgggtgcagggaact
gaacctgggttctctgcaagagcagcaagtgctcttaaccactgagctat
cactcagccccagtccattagtgttggattttgcttcactgaagtttcac
agcagtaaaatcctaactaagacaatatataaatacaaagttttaaagta
atggactaacttatttaacagaggcaatcttgagattctgtagcacccag
ggtgatcatgggccagatacaggcagatatacattacatctctacgcaat
tacagtaaagaaatatattctagaaactctagaatatgaacttttatgat
gtcagtccttataatttaaaatctggtgccgtggaatgacctatgacctt
cgaatgtctaatcagtaagtctat
caggacagtcaaggctatgaaaagaaaccatgtctcaaaaaaaaaacaaa
caaaaggaaatgatttaaagaaaaaatggggaaggagaggggaggaagga
gggaagatttttttctttttttctgtgaataattttataagcaatcacta
ttattgttcttgattttttattgctcttttagagctacttattgcaccca
taagtatatggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_116702941_116704124
seq2: B6Ng01-327F09.b_45_1218 (reverse)

seq1  ATAGAATTACTGATTAG-CATCTGAAAGGTCATAGGTTCTATTCC-CAGC  48
      ||||| ||||||||||| ||| |  ||||||||||||   ||||| | ||
seq2  ATAGACTTACTGATTAGACAT-TCGAAGGTCATAGGT--CATTCCACGGC  47

seq1  ACCAGATTTTAAAAATAATAAGGAACTGACATCATTAAAAGTCAATATTC  98
      ||||||||||  |||| |||||| |||||||||| |||||||  ||||||
seq2  ACCAGATTTT--AAATTATAAGG-ACTGACATCA-TAAAAGTTCATATTC  93

seq1  TAGAGTTTCTAGAATATATTTCTTTACTGTAATTGCGTAGAGATTGTTAA  148
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  TAGAGTTTCTAGAATATATTTCTTTACTGTAATTGCGTAGAGAT--GTAA  141

seq1  TGTTATATTCTGCCTGTATCTGGCCCATGATTCACCCTGGGTGCTACAGA  198
      || |||| |||||||||||||||||||||| |||||||||||||||||||
seq2  TG-TATA-TCTGCCTGTATCTGGCCCATGA-TCACCCTGGGTGCTACAGA  188

seq1  ATCTCAAGATTGCCTCTGTTAAATAAGTTAGTCCATTACTTTAAAACTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAGATTGCCTCTGTTAAATAAGTTAGTCCATTACTTTAAAACTTT  238

seq1  GTATTTATATATTGTCTTAGTTAGGATTTTACTGCTGTGAAACTTCAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATATATTGTCTTAGTTAGGATTTTACTGCTGTGAAACTTCAGTG  288

seq1  AAGCAAAATCCAACACTAATGGACTGGGGCTGAGTGATAGCTCAGTGGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAATCCAACACTAATGGACTGGGGCTGAGTGATAGCTCAGTGGTT  338

seq1  AAGAGCACTTGCTGCTCTTGCAGAGAACCCAGGTTCAGTTCCCTGCACCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTTGCTGCTCTTGCAGAGAACCCAGGTTCAGTTCCCTGCACCC  388

seq1  ACATGGAGACTCACAACTATCTATAATTGGCTCCAGGGGACCCAACACCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGACTCACAACTATCTATAATTGGCTCCAGGGGACCCAACACCC  438

seq1  TCTCTGACCTCTGAGGAGGATTGGGCACATACTTACACACAGGCAAAACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACCTCTGAGGAGGATTGGGCACATACTTACACACAGGCAAAACA  488

seq1  CTCATATACATGAAATAAATGAAAAATCGAATAATATATATATGATGGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATACATGAAATAAATGAAAAATCGAATAATATATATATGATGGTT  538

seq1  TATATATGCTTGGCCCAGGGGGCGGCACTATTAGGAGGTGTGGCCTTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCTTGGCCCAGGGGGCGGCACTATTAGGAGGTGTGGCCTTGTT  588

seq1  GGAGTAGGTGTGTCACCTGGGGCTTTAAGACCCTCATCTTAGCTGCCTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGGTGTGTCACCTGGGGCTTTAAGACCCTCATCTTAGCTGCCTGG  638

seq1  AAGTCAGTATTCTCCTAGCAGCCTTCAGATGAAGATGTAGAACTCTCAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTATTCTCCTAGCAGCCTTCAGATGAAGATGTAGAACTCTCAGC  688

seq1  TCCTCCTGCACCATGCCTGCCTGGATGTTGCCATGTTCCTGCCTTGACGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCACCATGCCTGCCTGGATGTTGCCATGTTCCTGCCTTGACGA  738

seq1  TACTGGACTGAAGCTCTGAACATGTAAGCCAACCCCAATTAAATGTTGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGACTGAAGCTCTGAACATGTAAGCCAACCCCAATTAAATGTTGTC  788

seq1  CTTAGAAGAGTAGCCTTGGTCTTGGTGTCTGTTCACAGCAGTAAAACCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAGAGTAGCCTTGGTCTTGGTGTCTGTTCACAGCAGTAAAACCCT  838

seq1  AAGTAAGACAATATATAAATAAAAAAAAATTTAAAGTAATGGGCTAACTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGACAATATATAAATAAAAAAAAATTTAAAGTAATGGGCTAACTT  888

seq1  ATTTAACAGAGGAAATCTTTTTTTTAAAGATTTATTTACTTTATGTATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACAGAGGAAATCTTTTTTTTAAAGATTTATTTACTTTATGTATGT  938

seq1  GAGTACACTGTAGCTGTACAGATGGTTGTGAGTCTTCATGTGGTTGCTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACTGTAGCTGTACAGATGGTTGTGAGTCTTCATGTGGTTGCTGG  988

seq1  GAATTGAATTTAGGACCTCTGCTCATTCAGGTCAACCCTGCTTGATCAGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAATTTAGGACCTCTGCTCATTCAGGTCAACCCTGCTTGATCAGT  1038

seq1  CCCTGTTCGCTCCGACCCAAAGATTTATTTATTATAAATAAATACACCGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCGCTCCGACCCAAAGATTTATTTATTATAAATAAATACACCGT  1088

seq1  AGCTGACTTCAGACACACCAGAAGAGGTCATCAGATCTCATTATGGATGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTTCAGACACACCAGAAGAGGTCATCAGATCTCATTATGGATGG  1138

seq1  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTC  1184
      ||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTC  1174