BAC Information

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BAC

Clone NameB6Ng01-327G19
Chromosome10 (Build37)
Map Location 30,524,681 - 30,525,748
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7, LOC382354
Downstream geneHey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327G19.bB6Ng01-327G19.g
ACCGA114977GA114978
length1,0801,187
definitionB6Ng01-327G19.b B6Ng01-327G19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctggaatgcttgccagatttcaatgggtaggaaagatataca
gaaagaattggaggtaatttgggtgcagctagatcaaatactattagaat
atatacataagagcatgataatccttaagaattcacagattgcctttgga
ctacagcttcagcatgtgctggccttggatacatttctaactgatgcttt
tatcttcaaaggtggatgatcgcagcaccatcttcatagggtagatacag
ggaatgaagtaattcatgaacagtatgtatcatgtagaatgtgtaatcaa
tagaagtcagctattattataatagcatgtgttagggtgacaaaagtttt
cttttcaaaacttgtatccctgaactggacactatagtccatttctgtaa
tgccaatgtttaggaaggcagaaacaggaggattgtcagtctcaagccag
cctgtgctacatagcaaaatcctatctctaattagtaaaagtaattgatt
aaaataaaacgatctccatagcacctctcactgtacttggctagtggaaa
gtgatgaactgttggggcttgaagcctgtggaaaacatgaagaaaagtgg
tttttcctctgataaaggggagaaattagggtgcagcagtttaagtgcac
tagacatgctctttcttctgtggcaaataatctttatatagagactttta
cataaatagagaggcagggagcatcaatgacaatatgcaaatagtatcat
tcttacctgtctgtctagagataattctgccctgaagaatatggctagtg
tttgttttaaaacgcaatattggccatgtgtcatggaactagaatttcaa
gaatatagttaaatatggctcttaaccatttgctgataaagggtccctga
ttaagtagtgaacttaggaatctgggaatgtggctcagttggcaaagtgc
ttgctacacagcctgcatcaactccgcagtgctcacagaaaagctagggg
tctcaaaaataagaatggatcataatagaggaacataccagaagtctcct
ctgccctacccacccccccaaaccacacac
gaattccagttttatgtttaataccgaattctttacagaatgaaataaag
tttttactggaataagatggcccattgtctgtcttaataagtttaggcaa
tcccatggcattaaatgcttgtaggcaatgatcaattacattttttgaag
cttctcctgtatgcagagaagcaaaaagaaatcctgaacaagtatcaatg
caaacatgtatatattttagttttccaaattctgcataatgggttatatc
catttgccaaatatgattaggcataaggcctctaggattaactcctagat
gcggcactggagataaagtaatacatttaggacattgttttacgatcatt
ctcgcttgctcctttgtgatcttatgtcggagccttagggtatggctaga
aagatgaaacctttcgtgatcacgttgggccaaagcaacccgatctgaaa
ctaaggcttctcctattagagctctgtcaatgcgatcattaccctctgcc
agaggtccaggaagaccagagtgagaccgtatgtggccaatataaaacgg
atttttccgggcgagaatgatgttttgtaattctgaaaataaagatcctg
acggcgtattgaagttaaacgtaccacaggtttccaataagggtactgac
tgagcaacatataaactgtcagtaaaaatattaaaagcctcatgtacaga
ctgaaaaaccttcagtactgctgttaattcggcgagctgagccgagagac
caggagtctctacaataacctgttgattactaataagatatccagctcgc
cctttagaggagccatcagtaaaaatcaatagagcattatttaaaggctg
taaggaagtcatcttaggaaatatcatatcatgcacatttaagaatttta
tcaacctatcttgggggtagtggctatctagagttccttcaaaccctaat
tgcgcaagcaaccaatctgtactatgctgtttcagccaagtgtcctgact
caacaattgtaaggctggacaatgatatctggctcctttcaaaatagtca
tgcctgccctcttccagtgatattcatctgagcactgccttcgtgaatat
ggcagatattacggtttggcagaaatctcgagtatcccattttatagaat
tttggcctatagcacaattcccgcttagggcctacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30524681_30525748
seq2: B6Ng01-327G19.b_46_1125

seq1  GAATTCTTCTGGAATGCTTGCCAGATTTCAATGGGTAGGAAAGATATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGAATGCTTGCCAGATTTCAATGGGTAGGAAAGATATACA  50

seq1  GAAAGAATTGGAGGTAATTTGGGTGCAGCTAGATCAAATACTATTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTGGAGGTAATTTGGGTGCAGCTAGATCAAATACTATTAGAAT  100

seq1  ATATACATAAGAGCATGATAATCCTTAAGAATTCACAGATTGCCTTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATAAGAGCATGATAATCCTTAAGAATTCACAGATTGCCTTTGGA  150

seq1  CTACAGCTTCAGCATGTGCTGGCCTTGGATACATTTCTAACTGATGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCTTCAGCATGTGCTGGCCTTGGATACATTTCTAACTGATGCTTT  200

seq1  TATCTTCAAAGGTGGATGATCGCAGCACCATCTTCATAGGGTAGATACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCAAAGGTGGATGATCGCAGCACCATCTTCATAGGGTAGATACAG  250

seq1  GGAATGAAGTAATTCATGAACAGTATGTATCATGTAGAATGTGTAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAAGTAATTCATGAACAGTATGTATCATGTAGAATGTGTAATCAA  300

seq1  TAGAAGTCAGCTATTATTATAATAGCATGTGTTAGGGTGACAAAAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTCAGCTATTATTATAATAGCATGTGTTAGGGTGACAAAAGTTTT  350

seq1  CTTTTCAAAACTTGTATCCCTGAACTGGACACTATAGTCCATTTCTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAAAACTTGTATCCCTGAACTGGACACTATAGTCCATTTCTGTAA  400

seq1  TGCCAATGTTTAGGAAGGCAGAAACAGGAGGATTGTCAGTCTCAAGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATGTTTAGGAAGGCAGAAACAGGAGGATTGTCAGTCTCAAGCCAG  450

seq1  CCTGTGCTACATAGCAAAATCCTATCTCTAATTAGTAAAAGTAATTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTACATAGCAAAATCCTATCTCTAATTAGTAAAAGTAATTGATT  500

seq1  AAAATAAAACGATCTCCATAGCACCTCTCACTGTACTTGGCTAGTGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACGATCTCCATAGCACCTCTCACTGTACTTGGCTAGTGGAAA  550

seq1  GTGATGAACTGTTGGGGCTTGAAGCCTGTGGAAAACATGAAGAAAAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAACTGTTGGGGCTTGAAGCCTGTGGAAAACATGAAGAAAAGTGG  600

seq1  TTTTTCCTCTGATAAAGGGGAGAAATTAGGGTGCAGCAGTTTAAGTGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTCTGATAAAGGGGAGAAATTAGGGTGCAGCAGTTTAAGTGCAC  650

seq1  TAGACATGCTCTTTCTTCTGTGGCAAATAATCTTTATATAGAGACTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGCTCTTTCTTCTGTGGCAAATAATCTTTATATAGAGACTTTTA  700

seq1  CATAAATAGAGAGGCAGGGAGCATCAATGACAATATGCAAATAGTATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAGAGAGGCAGGGAGCATCAATGACAATATGCAAATAGTATCAT  750

seq1  TCTTACCTGTCTGTCTAGAGATAATTCTGCCCTGAAGAATATGGCTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTGTCTGTCTAGAGATAATTCTGCCCTGAAGAATATGGCTAGTG  800

seq1  TTTGTTTTAAAACGCAATATTGGCCATGTGTCATGGAACTAGAATTTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTAAAACGCAATATTGGCCATGTGTCATGGAACTAGAATTTCAA  850

seq1  GAATATAGTTAAATATGGCTCTTAACCATTTGCTGAT-AAGGGTCCCTGA  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATATAGTTAAATATGGCTCTTAACCATTTGCTGATAAAGGGTCCCTGA  900

seq1  TTAAGTAGTGAACTTAGGAATCTGGGAATGTGGCTCAGTTGGCAAAGTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAGTGAACTTAGGAATCTGGGAATGTGGCTCAGTTGGCAAAGTGC  950

seq1  TTGCTACACAGCCTGCATCAACTCCGCAGTGCTCACAGAAAAGCTAGGGG  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGCTACACAGCCTGCATCAACTCCGCAGTGCTCACAGAAAAGCTA-GGG  999

seq1  GTCTCAAAAAATAAG-ATGGATCATAATAGAGGAACATACCAGAAGTCCT  1048
      ||||| ||||||||| ||||||||||||||||||||||||||||||| ||
seq2  GTCTC-AAAAATAAGAATGGATCATAATAGAGGAACATACCAGAAGT-CT  1047

seq1  CCTCTGCCCTACACACACAC-------------  1068
      |||||||||||| ||| | |             
seq2  CCTCTGCCCTACCCACCCCCCCAAACCACACAC  1080