BAC Information

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BAC

Clone NameB6Ng01-327I14
Chromosome10 (Build37)
Map Location 50,975,505 - 50,976,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629652, Ascc3, Sim1, LOC268300
Downstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327I14.bB6Ng01-327I14.g
ACCGA115057GA115058
length9981,072
definitionB6Ng01-327I14.b B6Ng01-327I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaacaccaaatggcagagaagcacctgaaaaaatg
ttcaacacccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggtttctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaacctgtaagaagaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaatagaggaatggatacagaaaatgttgtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgcgtgaagtaacccaatcacaaag
gaacttgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaatgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaa
caaaacacccatagaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggttccatcccataatc
agcttccaaatgctgacaccatttcatacactagcaagattttgctgaaa
ggacccagatatagctctctcttgtgatactatgcaggggcctagcaaac
acagaagtggatgatcacagtcagccattggataggtcacagggccccta
atggaggagctagagaaattacccaaggagctagagggaactgcaacc
gaattccttcacctcaacatcccaaaaccccgtcatactgaacacttttc
agatctctgaatgcaacctatgtttttcagaaagatatggaatgaacatt
tctcactttctctttattttctgggcttgcttctatctggggtcaacttt
tgtattactttttccacaaatatgacatgtttattctaggcaggtgggtt
tggttcttattcttctagctaggttaatactaacttgaggccatcactgt
atttaaaggaaccaagcacttccaacataaaacacatacactccacaaca
ctgctttcgtggacataaatctacctacaaagcagtttcaaggaaaataa
aatcaaaaagcagtgctgggatcatactgttctcaacttctgtattcttt
gatacagtaatttccccttaggtgtaatattctaatgtactagatagctc
tcatgagccttttcaggcaacactgaggatttaatttctgaatatatcta
agtatttgaaaataggtcttcaagaacagtgctagctgttggtgagagtg
cccagtgtgtaaaggcacttgacaactttgagtttggttcttggtatcca
catggttaaaggagagaacccacccctacaaattgtcctttgacctcaac
atgtgagctttagtatatgtatactccctatacaagtaaacaaacacaca
ctcacacacacaaatactcacacagacacatactcacacacacacacata
cacactctctctcacacacacatacacacacactcatacacacacatata
cacttatacactcacacacatacacacactcacacacacattagtacaca
cacttacacacactcacaaactctacacacatacacacataaactctcac
acacacacactctcacacacatacacactcacacacaaatgcacacactc
atacacacacactcacacacacatactcacacatacactcacacacacac
aaacacacacatacacacacacacttcttcacacaacatacacaaaacac
tctctctcttctctcgtctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50975505_50976572
seq2: B6Ng01-327I14.g_66_1137

seq1  GAATTCCTTCACCTCAACATCCCAAAACCCCGTCATACTGAACACTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCACCTCAACATCCCAAAACCCCGTCATACTGAACACTTTTC  50

seq1  AGATCTCTGAATGCAACCTATGTTTTTCAGAAAGATATGGAATGAACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTGAATGCAACCTATGTTTTTCAGAAAGATATGGAATGAACATT  100

seq1  TCTCACTTTCTCTTTATTTTCTGGGCTTGCTTCTATCTGGGGTCAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTTCTCTTTATTTTCTGGGCTTGCTTCTATCTGGGGTCAACTTT  150

seq1  TGTATTACTTTTTCCACAAATATGACATGTTTATTCTAGGCAGGTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTACTTTTTCCACAAATATGACATGTTTATTCTAGGCAGGTGGGTT  200

seq1  TGGTTCTTATTCTTCTAGCTAGGTTAATACTAACTTGAGGCCATCACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTATTCTTCTAGCTAGGTTAATACTAACTTGAGGCCATCACTGT  250

seq1  ATTTAAAGGAACCAAGCACTTCCAACATAAAACACATACACTCCACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGAACCAAGCACTTCCAACATAAAACACATACACTCCACAACA  300

seq1  CTGCTTTCGTGGACATAAATCTACCTACAAAGCAGTTTCAAGGAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCGTGGACATAAATCTACCTACAAAGCAGTTTCAAGGAAAATAA  350

seq1  AATCAAAAAGCAGTGCTGGGATCATACTGTTCTCAACTTCTGTATTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAAAGCAGTGCTGGGATCATACTGTTCTCAACTTCTGTATTCTTT  400

seq1  GATACAGTAATTTCCCCTTAGGTGTAATATTCTAATGTACTAGATAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGTAATTTCCCCTTAGGTGTAATATTCTAATGTACTAGATAGCTC  450

seq1  TCATGAGCCTTTTCAGGCAACACTGAGGATTTAATTTCTGAATATATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGCCTTTTCAGGCAACACTGAGGATTTAATTTCTGAATATATCTA  500

seq1  AGTATTTGAAAATAGGTCTTCAAGAACAGTGCTAGCTGTTGGTGAGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGAAAATAGGTCTTCAAGAACAGTGCTAGCTGTTGGTGAGAGTG  550

seq1  CCCAGTGTGTAAAGGCACTTGACAACTTTGAGTTTGGTTCTTGGTATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTGTAAAGGCACTTGACAACTTTGAGTTTGGTTCTTGGTATCCA  600

seq1  CATGGTTAAAGGAGAGAACCCACCCCTACAAATTGTCCTTTGACCTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTAAAGGAGAGAACCCACCCCTACAAATTGTCCTTTGACCTCAAC  650

seq1  ATGTGAGCTTTAGTATATGTATACTCCCTATACAAGTAAACAAACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGCTTTAGTATATGTATACTCCCTATACAAGTAAACAAACACACA  700

seq1  CTCACACACACAAATACTCACACAGACACATACTCACACACACACACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACACACAAATACTCACACAGACACATACTCACACACACACACATA  750

seq1  CACACTCTCTCTCACACACACATACACACACACTCATACACACACATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTCTCTCACACACACATACACACACACTCATACACACACATATA  800

seq1  CACTTATACACTCACACACATACACACACTCACACACACATTAGTACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATACACTCACACACATACACACACTCACACACACATTAGTACACA  850

seq1  CACTTACACACACTCACAAACTCTACACACATACACACATAAACTCTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACACACACTCACAAACTCTACACACATACACACATAAACTCTCAC  900

seq1  ACACACACACTCTCACACACATACACACTCACACACAAATGCACACACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACTCTCACACACATACACACTCACACACAAATGCACACACTC  950

seq1  ATACACACACACTCACACACACATACTCACACATACACTCACACACACAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACTCACACACACATACTCACACATACACTCACACACACAC  1000

seq1  AAACACACACATACACACACACACT--CTCACAC-ACATACAC-AAACAC  1046
      |||||||||||||||||||||||||   |||||| |||||||| ||||||
seq2  AAACACACACATACACACACACACTTCTTCACACAACATACACAAAACAC  1050

seq1  TCTCTCTCTCTCTCTC-TCTCTC  1068
      ||||||||| |||||| ||||||
seq2  TCTCTCTCT-TCTCTCGTCTCTC  1072