BAC Information

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BAC

Clone NameB6Ng01-328B10
Chromosome10 (Build37)
Map Location 96,861,945 - 96,972,835
singlet/doubletdoublet
Overlap geneDcn
Upstream geneLOC667380, Btg1, LOC628256, 4930556N09Rik, EG667407
Downstream geneLum, Kera, Epyc, 4921510H08Rik, EG667438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328B10.bB6Ng01-328B10.g
ACCGA115445GA115446
length1,1581,140
definitionB6Ng01-328B10.b B6Ng01-328B10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,971,676 - 96,972,835)(96,861,945 - 96,863,081)
sequence
gaattcatctgataagctggagttttacttaaaagcaacaataaggtgtg
atagtttttaaaaattgatagagcattgtgtttctaacgttgaataacac
ccttcccttggcatcctttgatagaaagtgatggatttcttacttagaca
aattaatcagtcctttcaggctgggtgcatcaaccttggtgatcttgttg
ccatctagatgcacttcagtgagagaagtaggcagacctggaataagcag
aaaaagatgctgaagtggccaacacacattataaatgcagaatatactcc
aatgggtacccatgctgtgaatttctaaataccatttcaaataattttgg
tcttcatctttttccttctttctttttataaaaacaatgcatactttaaa
gtgatgtgacactttactgtttttatcttagagagacattgataaggtta
agaactgccagtatcatgggatggatttttgtgcttgcaactgcagaacc
aaagtcagacattgaccttcattgctctctccacctgtgtcagtgagctc
acattgctgttattatataaacacattcatgatgtaaaatcatgaaaagg
aggaagccgacactggaatgctagtgcagggattatgcaccagtgtatca
gttaagtccgtgtataaatatacacagatattttattataagattaattc
agaatgagaactcagtgtatcgtgctggtgttggcctgtggacaggatgc
ctttgtgagagtatttgatgcctctgcaccatggctgtccagcaatagct
agaacttacatagacctattaaatccagactgtttccccctgagaggagg
tccagagccctataacctgacatatgtagaacacctgggcaaataattta
aaatttaaagggcccactaaactctcaacaatacttgattaatggttgtg
aattccgaagatttagtaatgtaagtagtaagcaatattaaattttcatt
cttcttgccttccaaaggaccatgtctatatatggctgtaataatgcaga
gttctgctttaatgagtagcaacagctacaagaaaaacagtgaattcata
ctacgatctagtacgtgcctgaagggaggcttaattacttattatagtat
taattatt

gaattcattcaattttaaaagtaatctcactgttttcattgaaaatatat
cctattcctgctctctatcttcttcatcttgtatccacagatgattttcc
tttgttttattgcagcaactggcatcttcaggcatgtttgttcccttgag
tcttccctcaagagggacaaaatgtttgaattgtctgtgaataattaaaa
caaagacctaagagacagtgttatagttgagcctagagttgttagagtta
aatgcaatggaggttaaaatacaagaaacagttccctggataagatggca
aggaaatgccatttactgtcaaaaaaggagtggtctcagggttgagccac
aactgctttcagtgtttaagagacaggcagataagtgtgagccaaactgg
cacaaaagaaaggaaaaagtggtcacagaagtggccgaagaaaccagtgc
catggcattcaacaggctagagagctctggaaagagtcagtttaatgatg
ctgggcatgctagtggaaaatgtctagtaatttcagcattactctgacta
tttgagtccatcttagaaactattttagtggcacagaagaatgaaaaaca
tattgaggaaggtgaattgaggagaggaaaatttaaaggtaagatatatt
agttacacttctggaaactacatcagaaggcacagaaggtaagaccgtag
ctagacgtggaaatagatgttgatggttgtacaccatgacattgggccac
atgtttctgattagttgacttcttcttatccacatctatctccatgaata
acaatctgctcctgtctgctgttaccactttcttattgagactgccatct
ttctgtagagggcatggcagtgggcatacacgttggcctatctattgtga
tgagtccttgatctccctctctctgtgacatcattcatcctagcatcctt
tccctactaataagtcagggaagatcaatgtttacttcagtttcctggcc
aatattgtgtgttctttcaagaagtttcaggaatgattaggagtcatgca
gtcactctctttgctaagacatttcccaggagagctttcttgtacagtag
ggactagtaggttccttcatgatttatgatacattaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_96971676_96972835
seq2: B6Ng01-328B10.b_46_1203 (reverse)

seq1  AATAATTATAAATAAATTA---AATAAAACCTCCCTTCAGGCACGTACTA  47
      ||||||||  | || | ||   ||| || |||||||||||||||||||||
seq2  AATAATTAATACTATAATAAGTAATTAAGCCTCCCTTCAGGCACGTACTA  50

seq1  GATCCGTAGGTATGAATTCACTG-TTTTCTTGTAGCTGTTGCTACTCATT  96
      ||| |||| |||||||||||||| ||||||||||||||||||||||||||
seq2  GAT-CGTA-GTATGAATTCACTGTTTTTCTTGTAGCTGTTGCTACTCATT  98

seq1  AAAGCAGAACTCTGCATTATTAACAGCCATATATAGACATGGTCCTTTGG  146
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAGCAGAACTCTGCATTATT-ACAGCCATATATAGACATGGTCCTTTGG  147

seq1  AAGGCAAGAAGAAATGAAAAATTTAAATATTGCTTACTACTTACATTACT  196
      ||||||||||| ||||||||  || |||||||||||||||||||||||||
seq2  AAGGCAAGAAG-AATGAAAA--TTTAATATTGCTTACTACTTACATTACT  194

seq1  AAATCTTCGGAATTCACAACCATTAATCAAGTATTGTTGAGAGTTTAGTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTCGGAATTCACAACCATTAATCAAGTATTGTTGAGAGTTTAGTG  244

seq1  GGCCCTTTAAATTTTAAATTATTTGCCCAGGTGTTCTACATATGTCAGGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTTTAAATTTTAAATTATTTGCCCAGGTGTTCTACATATGTCAGGT  294

seq1  TATAGGGCTCTGGACCTCCTCTCAGGGGGAAACAGTCTGGATTTAATAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGCTCTGGACCTCCTCTCAGGGGGAAACAGTCTGGATTTAATAGG  344

seq1  TCTATGTAAGTTCTAGCTATTGCTGGACAGCCATGGTGCAGAGGCATCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTAAGTTCTAGCTATTGCTGGACAGCCATGGTGCAGAGGCATCAA  394

seq1  ATACTCTCACAAAGGCATCCTGTCCACAGGCCAACACCAGCACGATACAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTCACAAAGGCATCCTGTCCACAGGCCAACACCAGCACGATACAC  444

seq1  TGAGTTCTCATTCTGAATTAATCTTATAATAAAATATCTGTGTATATTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTCATTCTGAATTAATCTTATAATAAAATATCTGTGTATATTTA  494

seq1  TACACGGACTTAACTGATACACTGGTGCATAATCCCTGCACTAGCATTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGGACTTAACTGATACACTGGTGCATAATCCCTGCACTAGCATTCC  544

seq1  AGTGTCGGCTTCCTCCTTTTCATGATTTTACATCATGAATGTGTTTATAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCGGCTTCCTCCTTTTCATGATTTTACATCATGAATGTGTTTATAT  594

seq1  AATAACAGCAATGTGAGCTCACTGACACAGGTGGAGAGAGCAATGAAGGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGCAATGTGAGCTCACTGACACAGGTGGAGAGAGCAATGAAGGT  644

seq1  CAATGTCTGACTTTGGTTCTGCAGTTGCAAGCACAAAAATCCATCCCATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTGACTTTGGTTCTGCAGTTGCAAGCACAAAAATCCATCCCATG  694

seq1  ATACTGGCAGTTCTTAACCTTATCAATGTCTCTCTAAGATAAAAACAGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGCAGTTCTTAACCTTATCAATGTCTCTCTAAGATAAAAACAGTA  744

seq1  AAGTGTCACATCACTTTAAAGTATGCATTGTTTTTATAAAAAGAAAGAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCACATCACTTTAAAGTATGCATTGTTTTTATAAAAAGAAAGAAG  794

seq1  GAAAAAGATGAAGACCAAAATTATTTGAAATGGTATTTAGAAATTCACAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGATGAAGACCAAAATTATTTGAAATGGTATTTAGAAATTCACAG  844

seq1  CATGGGTACCCATTGGAGTATATTCTGCATTTATAATGTGTGTTGGCCAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTACCCATTGGAGTATATTCTGCATTTATAATGTGTGTTGGCCAC  894

seq1  TTCAGCATCTTTTTCTGCTTATTCCAGGTCTGCCTACTTCTCTCACTGAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCTTTTTCTGCTTATTCCAGGTCTGCCTACTTCTCTCACTGAA  944

seq1  GTGCATCTAGATGGCAACAAGATCACCAAGGTTGATGCACCCAGCCTGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCTAGATGGCAACAAGATCACCAAGGTTGATGCACCCAGCCTGAA  994

seq1  AGGACTGATTAATTTGTCTAAGTAAGAAATCCATCACTTTCTATCAAAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGATTAATTTGTCTAAGTAAGAAATCCATCACTTTCTATCAAAGG  1044

seq1  ATGCCAAGGGAAGGGTGTTATTCAACGTTAGAAACACAATGCTCTATCAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAGGGAAGGGTGTTATTCAACGTTAGAAACACAATGCTCTATCAA  1094

seq1  TTTTTAAAAACTATCACACCTTATTGTTGCTTTTAAGTAAAACTCCAGCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAACTATCACACCTTATTGTTGCTTTTAAGTAAAACTCCAGCT  1144

seq1  TATCAGATGAATTC  1160
      ||||||||||||||
seq2  TATCAGATGAATTC  1158


seq1: chr10_96861945_96863081
seq2: B6Ng01-328B10.g_67_1206

seq1  GAATTCATTCAATTTTAAAAGTAATCTCACTGTTTTCATTGAAAATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAATTTTAAAAGTAATCTCACTGTTTTCATTGAAAATATAT  50

seq1  CCTATTCCTGCTCTCTATCTTCTTCATCTTGTATCCACAGATGATTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCCTGCTCTCTATCTTCTTCATCTTGTATCCACAGATGATTTTCC  100

seq1  TTTGTTTTATTGCAGCAACTGGCATCTTCAGGCATGTTTGTTCCCTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTATTGCAGCAACTGGCATCTTCAGGCATGTTTGTTCCCTTGAG  150

seq1  TCTTCCCTCAAGAGGGACAAAATGTTTGAATTGTCTGTGAATAATTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTCAAGAGGGACAAAATGTTTGAATTGTCTGTGAATAATTAAAA  200

seq1  CAAAGACCTAAGAGACAGTGTTATAGTTGAGCCTAGAGTTGTTAGAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTAAGAGACAGTGTTATAGTTGAGCCTAGAGTTGTTAGAGTTA  250

seq1  AATGCAATGGAGGTTAAAATACAAGAAACAGTTCCCTGGATAAGATGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAATGGAGGTTAAAATACAAGAAACAGTTCCCTGGATAAGATGGCA  300

seq1  AGGAAATGCCATTTACTGTCAAAAAAGGAGTGGTCTCAGGGTTGAGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGCCATTTACTGTCAAAAAAGGAGTGGTCTCAGGGTTGAGCCAC  350

seq1  AACTGCTTTCAGTGTTTAAGAGACAGGCAGATAAGTGTGAGCCAAACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTTCAGTGTTTAAGAGACAGGCAGATAAGTGTGAGCCAAACTGG  400

seq1  CACAAAAGAAAGGAAAAAGTGGTCACAGAAGTGGCCGAAGAAACCAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGAAAGGAAAAAGTGGTCACAGAAGTGGCCGAAGAAACCAGTGC  450

seq1  CATGGCATTCAACAGGCTAGAGAGCTCTGGAAAGAGTCAGTTTAATGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCATTCAACAGGCTAGAGAGCTCTGGAAAGAGTCAGTTTAATGATG  500

seq1  CTGGGCATGCTAGTGGAAAATGTCTAGTAATTTCAGCATTACTCTGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCATGCTAGTGGAAAATGTCTAGTAATTTCAGCATTACTCTGACTA  550

seq1  TTTGAGTCCATCTTAGAAACTATTTTAGTGGCACAGAAGAATGAAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCCATCTTAGAAACTATTTTAGTGGCACAGAAGAATGAAAAACA  600

seq1  TATTGAGGAAGGTGAATTGAGGAGAGGAAAATTTAAAGGTAAGATATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGGAAGGTGAATTGAGGAGAGGAAAATTTAAAGGTAAGATATATT  650

seq1  AGTTACACTTCTGGAAACTACATCAGAAGGCACAGAAGGTAAGACCGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACTTCTGGAAACTACATCAGAAGGCACAGAAGGTAAGACCGTAG  700

seq1  CTAGACGTGGAAATAGATGTTGATGGTTGTACACCATGACATTGGGCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACGTGGAAATAGATGTTGATGGTTGTACACCATGACATTGGGCCAC  750

seq1  ATGTTTCTGATTAGTTGACTTCTTCTTATCCACATCTATCTCCATGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTGATTAGTTGACTTCTTCTTATCCACATCTATCTCCATGAATA  800

seq1  ACAATCTGCTCCTGTCTGCTGTTACCACTTTCTTATTGAGACTGCCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGCTCCTGTCTGCTGTTACCACTTTCTTATTGAGACTGCCATCT  850

seq1  TTCTGTAGAGGGCATGGCAGTGGGCATACACGTTGGCCTATCTATTGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGAGGGCATGGCAGTGGGCATACACGTTGGCCTATCTATTGTGA  900

seq1  TGAGTCCTTGATCTCCCTCTCTCTGTGACATCATTCATCCTAGCATCC-T  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGAGTCCTTGATCTCCCTCTCTCTGTGACATCATTCATCCTAGCATCCTT  950

seq1  TCCCTACTATAAAGTCA-GGAAGATCAATGTTTACTTCAGTTTCCTGGCC  998
      |||||||||  |||||| ||||||||||||||||||||||||||||||||
seq2  TCCCTACTAATAAGTCAGGGAAGATCAATGTTTACTTCAGTTTCCTGGCC  1000

seq1  -ATA-TGTGTGT--CTTCCAGAAGTTTCAAGAAGGAT--AGAGTCATGCA  1042
       ||| |||||||   ||| |||||||||| ||| |||   ||||||||||
seq2  AATATTGTGTGTTCTTTCAAGAAGTTTCAGGAATGATTAGGAGTCATGCA  1050

seq1  GTCACTCTTCCTTGCTAAGGAACATTTCCCA-GAGAGCCTTC-TGTACAG  1090
      ||||||| || ||||||||  |||||||||| |||||| ||| |||||||
seq2  GTCACTC-TCTTTGCTAAG--ACATTTCCCAGGAGAGCTTTCTTGTACAG  1097

seq1  TAAGGGACTAGTAAGGTTTCTTCAATGAATTAATGATACATTAATGA  1137
      | |||||||||| ||||| |||| ||| ||| |||||||||||||||
seq2  T-AGGGACTAGT-AGGTTCCTTC-ATG-ATTTATGATACATTAATGA  1140


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