BAC Information

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BAC

Clone NameB6Ng01-330E24
Chromosome10 (Build37)
Map Location 25,510,541 - 25,631,607
singlet/doubletdoublet
Overlap geneLOC667519, LOC628697
Upstream geneEnpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513
Downstream geneC030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330E24.bB6Ng01-330E24.g
ACCGA117025GA117026
length1,116694
definitionB6Ng01-330E24.b B6Ng01-330E24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,630,491 - 25,631,607)(25,510,541 - 25,511,230)
sequence
gaattcactaaatgtgctacctcctctcctaaattcatgcactggaggag
tcctcactccaatctgatggcatctacctcccttctagcccaccaaccaa
aggtaggggagaaaaaagttaatagaaatcaggggatgtggacctgatta
gaagtagttctttgggtacaattccaaacacgaatcagtaataacagaag
aatccttgaggatccaaccaaatcagctctagtctgaggaagctacaaga
agcagacagaataccacagtaagttctctgacccatttctctctatgaag
tcacaacaagcaaagatcttaaaagaccagcaaagtgatgcaaggcgaac
caatgcaagagtgtcttctcgccgtttgtggggttaaatttacgtttttt
ctaaacatcacacaccctctcgtgtctgctccagacaaacatcgcatgcc
ctttcccaacacagcttccagcaaaaacatcacaactgagtctctaaaga
actcagaaatttccacttcacctctgatttcacatttctagagttataga
aagcaaatgttttttaagtcaccaagttggtggtattttataactaacca
caactgaagctaagacaatttatttataagcacaaaagcaaaattttctg
cactgtggggtttgttttcttctttgagaatatacttttccaataaaaca
atctcctgggatcaggatgaaattgagctagcacaatgcacatgataact
gaattgttaattaatattatttagcatttgctgcattccaggggttgtgc
tgcccaagttgagcttcattttgctgttacaacctgttctagtttgctgt
ctgtttctgcagtaagcagcgtgaccaaaagcaaattgggaaggaaaggg
tgtgcctcagtttacatttcatgttgtggtctttcactgaggaaggtacg
gcagagccacaagcggaaactggccgtgcttgggcacgcctagctagtct
tcttctcaccagcactggcctcaaccttcccaggatggacagttcttcca
tcaccatgccctatcctgtgtgaccttctagatttgtgtccagtgacagt
aaaaccttactaggat
gaattcattcacagagtgcagatggtgcttccaagatgaataattcatca
gaatcacttgacaaactggtggctggatcagaccccctagtgtcctggtt
ctgctggtttgaggatgggtcttgaactagtgttttaagtattgttcatg
atttgggttcaggaatcagtcttggtaccattagtacagtatgaaagaag
gagatgcagaatgctaacatgtattataactaacagttctgtgggcctct
gtggtttgggttctgatgctcccccagatatccatgtgttaaaggcctta
tcttctttggtgcaaatgggaggtgatggaaccttgggctgaggctagtg
agagaggtgtgttcttagaggggatggcagggtcctgtcatctcttggtt
gctttcgggcaatgaagtaaacggttcattttacccatgttccataccct
tctcctctgtcacagccaccagaggcccaaagcaatgggcccatctaact
atggactggaaactccaaaactgtgagccaaaagaaaactttgctctttg
caggttatcctagggtgttgttgttttggttgtttgtttgttttggggca
gtggttctccaattaaaggtggtgatttttgtgagcagcaaataacttat
aatacttgtgcagcttggttggaaaaaagtgttattgccccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25630491_25631607
seq2: B6Ng01-330E24.b_44_1159 (reverse)

seq1  ATTCTAGTAGGGTTTTACTGTCAACTTGACAC-AATCTAGA--GTCACAC  47
      || |||||| |||||||||||| ||| ||||| ||||||||  |||||||
seq2  ATCCTAGTAAGGTTTTACTGTC-ACTGGACACAAATCTAGAAGGTCACAC  49

seq1  AGGAATAGGGCATGTTGATGGAAGAACTGTCCATCCCTGGGAAGGTTGAG  97
      ||| |||||||||| ||||||||||||||||||| |||||||||||||||
seq2  AGG-ATAGGGCATGGTGATGGAAGAACTGTCCAT-CCTGGGAAGGTTGAG  97

seq1  GCCAGTGCTGGGTGAGAAGAAGACTAGCTAGGCGTGCCCAAGCACGGCCA  147
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGCT-GGTGAGAAGAAGACTAGCTAGGCGTGCCCAAGCACGGCCA  146

seq1  GTTTCCGCTTGTGGCTCTGCCGTACCTTCCTCAGTGAAAGACCACAACAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCGCTTGTGGCTCTGCCGTACCTTCCTCAGTGAAAGACCACAACAT  196

seq1  GAAATGTAAACTGAGGCACACCCTTTCCTTCCCAATTTGCTTTTGGTCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAAACTGAGGCACACCCTTTCCTTCCCAATTTGCTTTTGGTCAC  246

seq1  GCTGCTTACTGCAGAAACAGACAGCAAACTAGAACAGGTTGTAACAGCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTACTGCAGAAACAGACAGCAAACTAGAACAGGTTGTAACAGCAA  296

seq1  AATGAAGCTCAACTTGGGCAGCACAACCCCTGGAATGCAGCAAATGCTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCTCAACTTGGGCAGCACAACCCCTGGAATGCAGCAAATGCTAA  346

seq1  ATAATATTAATTAACAATTCAGTTATCATGTGCATTGTGCTAGCTCAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTAATTAACAATTCAGTTATCATGTGCATTGTGCTAGCTCAATT  396

seq1  TCATCCTGATCCCAGGAGATTGTTTTATTGGAAAAGTATATTCTCAAAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTGATCCCAGGAGATTGTTTTATTGGAAAAGTATATTCTCAAAGA  446

seq1  AGAAAACAAACCCCACAGTGCAGAAAATTTTGCTTTTGTGCTTATAAATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAACCCCACAGTGCAGAAAATTTTGCTTTTGTGCTTATAAATA  496

seq1  AATTGTCTTAGCTTCAGTTGTGGTTAGTTATAAAATACCACCAACTTGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTAGCTTCAGTTGTGGTTAGTTATAAAATACCACCAACTTGGT  546

seq1  GACTTAAAAAACATTTGCTTTCTATAACTCTAGAAATGTGAAATCAGAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAAAAAACATTTGCTTTCTATAACTCTAGAAATGTGAAATCAGAGG  596

seq1  TGAAGTGGAAATTTCTGAGTTCTTTAGAGACTCAGTTGTGATGTTTTTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGAAATTTCTGAGTTCTTTAGAGACTCAGTTGTGATGTTTTTGC  646

seq1  TGGAAGCTGTGTTGGGAAAGGGCATGCGATGTTTGTCTGGAGCAGACACG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTGTGTTGGGAAAGGGCATGCGATGTTTGTCTGGAGCAGACACG  696

seq1  AGAGGGTGTGTGATGTTTAGAAAAAACGTAAATTTAACCCCACAAACGGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGTGTGATGTTTAGAAAAAACGTAAATTTAACCCCACAAACGGC  746

seq1  GAGAAGACACTCTTGCATTGGTTCGCCTTGCATCACTTTGCTGGTCTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACACTCTTGCATTGGTTCGCCTTGCATCACTTTGCTGGTCTTTT  796

seq1  AAGATCTTTGCTTGTTGTGACTTCATAGAGAGAAATGGGTCAGAGAACTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTTTGCTTGTTGTGACTTCATAGAGAGAAATGGGTCAGAGAACTT  846

seq1  ACTGTGGTATTCTGTCTGCTTCTTGTAGCTTCCTCAGACTAGAGCTGATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTATTCTGTCTGCTTCTTGTAGCTTCCTCAGACTAGAGCTGATT  896

seq1  TGGTTGGATCCTCAAGGATTCTTCTGTTATTACTGATTCGTGTTTGGAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGATCCTCAAGGATTCTTCTGTTATTACTGATTCGTGTTTGGAAT  946

seq1  TGTACCCAAAGAACTACTTCTAATCAGGTCCACATCCCCTGATTTCTATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCAAAGAACTACTTCTAATCAGGTCCACATCCCCTGATTTCTATT  996

seq1  AACTTTTTTCTCCCCTACCTTTGGTTGGTGGGCTAGAAGGGAGGTAGATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTTCTCCCCTACCTTTGGTTGGTGGGCTAGAAGGGAGGTAGATG  1046

seq1  CCATCAGATTGGAGTGAGGACTCCTCCAGTGCATGAATTTAGGAGAGGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGATTGGAGTGAGGACTCCTCCAGTGCATGAATTTAGGAGAGGAG  1096

seq1  GTAGCACATTTAGTGAATTC  1117
      ||||||||||||||||||||
seq2  GTAGCACATTTAGTGAATTC  1116

seq1: chr10_25510541_25511230
seq2: B6Ng01-330E24.g_65_758

seq1  GAATTCATTCACAGAGTGCAGATGGTGCTTCCAAGATGAATAATTCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCACAGAGTGCAGATGGTGCTTCCAAGATGAATAATTCATCA  50

seq1  GAATCACTTGACAAACTGGTGGCTGGATCAGACCCCCTAGTGTCCTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACTTGACAAACTGGTGGCTGGATCAGACCCCCTAGTGTCCTGGTT  100

seq1  CTGCTGGTTTGAGGATGGGTCTTGAACTAGTGTTTTAAGTATTGTTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTTTGAGGATGGGTCTTGAACTAGTGTTTTAAGTATTGTTCATG  150

seq1  ATTTGGGTTCAGGAATCAGTCTTGGTACCATTAGTACAGTATGAAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGTTCAGGAATCAGTCTTGGTACCATTAGTACAGTATGAAAGAAG  200

seq1  GAGATGCAGAATGCTAACATGTATTATAACTAACAGTTCTGTGGGCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCAGAATGCTAACATGTATTATAACTAACAGTTCTGTGGGCCTCT  250

seq1  GTGGTTTGGGTTCTGATGCTCCCCCAGATATCCATGTGTTAAAGGCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGGGTTCTGATGCTCCCCCAGATATCCATGTGTTAAAGGCCTTA  300

seq1  TCTTCTTTGGTGCAAATGGGAGGTGATGGAACCTTGGGCTGAGGCTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTGGTGCAAATGGGAGGTGATGGAACCTTGGGCTGAGGCTAGTG  350

seq1  AGAGAGGTGTGTTCTTAGAGGGGATGGCAGGGTCCTGTCATCTCTTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTGTGTTCTTAGAGGGGATGGCAGGGTCCTGTCATCTCTTGGTT  400

seq1  GCTTTCGGGCAATGAAGTAAACGGTTCATTTTACCCATGTTCCATACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCGGGCAATGAAGTAAACGGTTCATTTTACCCATGTTCCATACCCT  450

seq1  TCTCCTCTGTCACAGCCACCAGAGGCCCAAAGCAATGGGCCCATCTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTGTCACAGCCACCAGAGGCCCAAAGCAATGGGCCCATCTAACT  500

seq1  ATGGACTGGAAACTCCAAAACTGTGAGCCAAAAGAAAACTTTGCTCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTGGAAACTCCAAAACTGTGAGCCAAAAGAAAACTTTGCTCTTTG  550

seq1  CAGGTTATCCTAGGGTGTTGTTGTTTTGGTTGTTTGTTTGTTTTGGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTATCCTAGGGTGTTGTTGTTTTGGTTGTTTGTTTGTTTTGGGGCA  600

seq1  GTGGTTCTCCAATTAAAGGTGGTGATTTTTGTGAGCAGCAATTAACTTAT  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGGTTCTCCAATTAAAGGTGGTGATTTTTGTGAGCAGCAAATAACTTAT  650

seq1  -ATACTTGTGCAGCTTAGT--GGAAAAAGTG-TAGTGCCCCAAA  690
       ||||||||||||||| ||  | |||||||| || |||||||||
seq2  AATACTTGTGCAGCTTGGTTGGAAAAAAGTGTTATTGCCCCAAA  694