BAC Information

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BAC

Clone NameB6Ng01-331K19
Chromosome10 (Build37)
Map Location 108,749,789 - 108,750,872
singlet/doubletsinglet
Overlap genenone
Upstream genePawr, EG667814, Syt1, EG368203
Downstream geneNav3, LOC100042497, LOC100042502, LOC100042506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331K19.bB6Ng01-331K19.g
ACCGA117978GA117979
length1,2021,104
definitionB6Ng01-331K19.b B6Ng01-331K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctttatttaatttgaatttggctattggcttgcagcatatcg
ccttcattatatttaggtatgctccttgtctccctagtctctccaggact
tttatcatgaaggagcactggattttgtcagaggcttttttgggcagcta
atgagatgatcatgtgtttgttttccttcacttgttttatgtggtagatt
acatttactgatttttttttttttaatattgactcatccttgcatctctg
ggatgaagcctacttgatcatggtattcactatgatcttttgatgtgttt
ttagattcagtttttgagtatttttgcatctatattcataagggaattta
gtccattaactccctttctttgttgactattcatgtggtttgagattcat
ggtcataaaatgaatttagtaatgttctttctatgtatattttgtggaat
aatctgaggagtagtggcatttgctcttttttgaaagtctggtaaaatta
gaactctctggcccaaggctatttatttatttatttatttatttatagat
gggagactttaaataattgcttccagggattgtttatatgatcttggttt
aactttggtaaagttatttctattgagaaaattgttcatttttaagatta
tttttattagagtgcttatttttaaagtatgtccttatgattctcaggat
ttccttggtgtcttgctatgttccccgtcttgtttctgtttggaatttag
acatttcatgtatgtcattacattgctaatatgacatccttccaattctt
tctgtgggcacttaatgctatgaaattaatccttagcactgttttcattg
tgttcagtaaatttgggtatattgtgtattcatcttcattgaattctaaa
agcctttaattcattccacccccctttcttctcccttttctttcttgacc
agtttttcattcagaagagaagtttagtttctatgagtttaataattctt
tcttggggtttttatttattgaatattccagctgttgatccattgcaatc
ttgattatgatacaagggtggctctaatatttcttggagttctatacacg
aatctttatgttgacctatgggaccattttgatcaagttgcatggaatgt
ctgagaagaagattctgttggggaactctgacattctgtaaggccatctg
tg
gaattccacacccctgaaccccctaccccataaaaacccctaactttcaa
gcctcggggccgacatcctttatctcctgtgtgggatacatgtcggtccg
gagctccgtaattaaacgtcctcatgtaattacatcaagatgtctgttcg
tgattcttgggtgcacgccgaatcgggaattgggtgggggtttccccact
aggttctttcagtttctatataggcgtgcatttgttatgcacatacgcag
catgatttctaagatggggaatatttgagagcacaataatcagctgtgca
cctgacatttcacaaagttaaagataaacaactgaaaaaatgagcaaggg
catgaatttttctcctcccaatccaacttgacatttttaaaccttgggtg
acaagaatttgttaaaaggtacaagagtcatcgaagaacagaaccatgta
gcttcaagatgtaaaattaaagggatgcaatgagggtgaatagtcttcca
tttgcttaaagcttcgtttgctataatgtacacattacacatgctgaggc
ctggtttgtagcacattaaatgttttttaccattttgaaggcttgttagg
cccctgcatatagaaagaaaagtcactagtagcaagttccattttacttg
ggaaaaaaataaaggttgctaaaactgggcaagtgttttgaagttggatt
ctccatattaaaagccacttgactaaagctgatccctcaagctctgccta
aatttcttctcagcattgtgtgtccttgtctgatcttctataaactatgg
aaacactcaactcgaaaaagtaccaactatgccaaaaggcattggtaaat
aactctgaaatactttgccctgggagaacacacgttctagaatcagcctg
tggtgccatcaataaacaagcagattcattttctaatgtggttaattata
cacaatgagcttttatttcagtcatccaggaaacaccaatgatgtcattt
gcaagaaaacaggatgggaactagatgatccatgtgtcaagttgaaatgt
taagtttccaacaaaagaatcagcattgaacgaaatgatttcccttccat
atat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108749789_108750872
seq2: B6Ng01-331K19.g_69_1172

seq1  GAATTCCACACCCCTGAACCCCCTACCCCATAAAAACCCCTAACTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCTGAACCCCCTACCCCATAAAAACCCCTAACTTTCAA  50

seq1  GCCTCGGGGCCGACATCCTTTATCTCCTGTGTGGGATACATGTCGGTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGGGGCCGACATCCTTTATCTCCTGTGTGGGATACATGTCGGTCCG  100

seq1  GAGCTCCGTAATTAAACGTCCTCATGTAATTACATCAAGATGTCTGTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCGTAATTAAACGTCCTCATGTAATTACATCAAGATGTCTGTTCG  150

seq1  TGATTCTTGGGTGCACGCCGAATCGGGAATTGGGTGGGGGTTTCCCCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTGGGTGCACGCCGAATCGGGAATTGGGTGGGGGTTTCCCCACT  200

seq1  AGGTTCTTTCAGTTTCTATATAGGCGTGCATTTGTTATGCACATACGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTTTCAGTTTCTATATAGGCGTGCATTTGTTATGCACATACGCAG  250

seq1  CATGATTTCTAAGATGGGGAATATTTGAGAGCACAATAATCAGCTGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTCTAAGATGGGGAATATTTGAGAGCACAATAATCAGCTGTGCA  300

seq1  CCTGACATTTCACAAAGTTAAAGATAAACAACTGAAAAAATGAGCAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATTTCACAAAGTTAAAGATAAACAACTGAAAAAATGAGCAAGGG  350

seq1  CATGAATTTTTCTCCTCCCAATCCAACTTGACATTTTTAAACCTTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTTTTCTCCTCCCAATCCAACTTGACATTTTTAAACCTTGGGTG  400

seq1  ACAAGAATTTGTTAAAAGGTACAAGAGTCATCGAAGAACAGAACCATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAATTTGTTAAAAGGTACAAGAGTCATCGAAGAACAGAACCATGTA  450

seq1  GCTTCAAGATGTAAAATTAAAGGGATGCAATGAGGGTGAATAGTCTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAGATGTAAAATTAAAGGGATGCAATGAGGGTGAATAGTCTTCCA  500

seq1  TTTGCTTAAAGCTTCGTTTGCTATAATGTACACATTACACATGCTGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTAAAGCTTCGTTTGCTATAATGTACACATTACACATGCTGAGGC  550

seq1  CTGGTTTGTAGCACATTAAATGTTTTTTACCATTTTGAAGGCTTGTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGTAGCACATTAAATGTTTTTTACCATTTTGAAGGCTTGTTAGG  600

seq1  CCCCTGCATATAGAAAGAAAAGTCACTAGTAGCAAGTTCCATTTTACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCATATAGAAAGAAAAGTCACTAGTAGCAAGTTCCATTTTACTTG  650

seq1  GGAAAAAAATAAAGGTTGCTAAAACTGGGCAAGTGTTTTGAAGTTGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAATAAAGGTTGCTAAAACTGGGCAAGTGTTTTGAAGTTGGATT  700

seq1  CTCCATATTAAAAGCCACTTGACTAAGGCTGATCCCTCAAGCTCTGCCTA  750
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCCATATTAAAAGCCACTTGACTAAAGCTGATCCCTCAAGCTCTGCCTA  750

seq1  AA-TTCTTCTCAGCATTGTGTGTCCTTGTCTGATCTTCTATAAACTATGG  799
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTCTCAGCATTGTGTGTCCTTGTCTGATCTTCTATAAACTATGG  800

seq1  AAACACTCAACTCGAAAAAGTACCAACTATGCCAAAAGGCATTGGTAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTCAACTCGAAAAAGTACCAACTATGCCAAAAGGCATTGGTAAAT  850

seq1  AACTCTGAAATACTTTGCCCTGGGAGAACACACGTTCTAGAATCAGCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGAAATACTTTGCCCTGGGAGAACACACGTTCTAGAATCAGCCTG  900

seq1  TGGTGCCATCAATAAACAAGCAGATTCA-TTTCTAATGTGG-TAAATATA  947
      |||||||||||||||||||||||||||| |||||||||||| ||| ||||
seq2  TGGTGCCATCAATAAACAAGCAGATTCATTTTCTAATGTGGTTAATTATA  950

seq1  CACAATGAGCTTTTA-TTCAGCCATCCAGGAAACA-CAATGATGTCATTT  995
      ||||||||||||||| ||||| ||||||||||||| ||||||||||||||
seq2  CACAATGAGCTTTTATTTCAGTCATCCAGGAAACACCAATGATGTCATTT  1000

seq1  GCAGGAAAACA-GAT-GGAACTAGA-GATCATTGTGTCAAG-TGAAATGT  1041
      ||| ||||||| ||| ||||||||| ||||  ||||||||| ||||||||
seq2  GCAAGAAAACAGGATGGGAACTAGATGATCCATGTGTCAAGTTGAAATGT  1050

seq1  T-AGTTTCC-ACAAA--GATCAGCAT--GACG-AATGATT---CTT-CAT  1080
      | ||||||| |||||   ||||||||   ||| |||||||   ||| |||
seq2  TAAGTTTCCAACAAAAGAATCAGCATTGAACGAAATGATTTCCCTTCCAT  1100

seq1  ATAT  1084
      ||||
seq2  ATAT  1104