BAC Information

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BAC

Clone NameB6Ng01-331L05
Chromosome10 (Build37)
Map Location 96,083,024 - 96,084,112
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628119, Eea1, EG432491, LOC667380, Btg1
Downstream geneLOC628256, 4930556N09Rik, EG667407, Dcn, Lum, Kera
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331L05.bB6Ng01-331L05.g
ACCGA117998GA117999
length1,2051,082
definitionB6Ng01-331L05.b B6Ng01-331L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatggggctatttgattc
tctggagtctaacttcttgagttcttggcatatattggatattagccctt
tatcagatgtaggattggtagagatcttttctcaatctggtggttgccat
ttttgtccagtacacctacagtcacttgatctttgacaaaggagctagct
aaaaccatccagtggaaaaaagaaaggactttcaacaaatggtgcttgta
cgactggctaacagcatgtagaagaatgcaaactgatccagtctcatctc
cttgtacaaaactcaagttgaagtagatcaagaacctccacataaaacca
gatacactgaaattaatagaagagaacgtggggaagaaccttgaacatgt
aggcacagggggaaaaaattcctggacagaacgccaatggtttatgctct
aagatcaacaattgacaaatgggacctcataaaattgccaagcttctgta
aggcaaaggacactgtttataggacgaatcggcaactaacagagattaaa
attcttaaaaacaaacatttcagatgaaaaggcattgggaattttcttct
aaacactgggaaggaatttaaccagtgaatcaagagtcaattaaatggtg
accagatttgatttggaaatcacaatagagtttggaaatgttctaaccaa
tgagaagagtcatttcaaggactgtcaccattaggtagctatcatgaggg
aatagaattaagaaggcctgccattctacagcatctaaatctggcaaatc
attagcgtaattgcaagtagaggacattggattgctgtattgtgtctttg
aaagaaaaatattttgaaaaagaaagcactctaaataaagggcacgaggc
agtgcctttagatagactaaaatatttatataatctaataactccctttc
agagtatcccttgactgagtgggattttgctctgtaactataaaatatac
cccagtaataccatagagagagtgcttcttctagtaagaaaataactggt
gttcaacagaggaaaaagtcaataaaagttgtccaaatgtcaaattttat
taacctaaccctggatgcatttttaaggaagaacttgtagggcatctgtg
ggggcaataattgacttcagagagccagaactctcagtccaatgtagtct
tttat
gaattcctaattttatgttagtcatcttttataaattattttttttcttt
aatttgggcagtgtaaacccttttaaattacacctctcgaaataaaaaaa
aaaaaaaaaaaaaacaaaaaacaaaaaaacaaaaaactggtagtaaatga
cacagcagcagacactcagtttttttgttttgttaaaatagctaaaccaa
acattagccagaagcagttggcacgaactactcaagtagctatgctgtgc
tgcacacacaggctcggctcagtggtctggggaatggaggtgagagtcac
aggaaacagctggatgctaggtctgagatacttgcaggcttcacaggccg
gatgtcacctgaactctaaaactgcagtttgaataggcgcttcttttgtt
caagcagcaacaaaaagtcttgacagcaaagtcaaagacacttctctatt
tcatttatgatgatgacatcttaggtactcaggatagacctgaacagtgt
ggaagagtccagtgttcaaagccagtcaggcagcttccaaggagttccca
aatgatacacaaattggccagcaggagagtgagacctgctttaaaccagc
ctgggatataatgctcaaactcaaatttgaaatgagggaccttttagaga
aagggctagatgaaatatgtcatttaaaaaaaatgtcacaatgagaccca
ttattgtgtagaaagaagaagaatctgagctcctggtctggagctgtgcc
atattatccgagacgccttgcattctgggggctaaagcaggaagatctag
agtgggggggccagcctgagctacatatagaacaagagaccatctcagaa
agcaaaataagggaaacaaaatccaaactcttccaaatagcctactgaca
aaatatatgaattccattcgtactctaaatacatggcatgtttagggttt
agtgatgtgtttctggatcgttaataaagtatcagggataccttattaca
ataaaaaacaaaactaaaactaaaccaaaacctcaattgttggaaatact
actgactagaacaattactgactaaagtcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_96083024_96084112
seq2: B6Ng01-331L05.g_71_1152 (reverse)

seq1  AATGACTTTAAGTCAGTAATTGTTCTAAGTCAGTAGTATTTCCAAACAAA  50
      ||||||||| |||||||||||||||| |||||||||||||||| ||||| 
seq2  AATGACTTT-AGTCAGTAATTGTTCT-AGTCAGTAGTATTTCC-AACAA-  46

seq1  TTGGAGGTTTTTTGGTTTTGTTTT-GTTTTGTTTTTTAATTTGTAATAA-  98
       | ||||  ||||||||| ||||| |||||||||||||  ||||||||| 
seq2  -TTGAGG--TTTTGGTTTAGTTTTAGTTTTGTTTTTTA--TTGTAATAAG  91

seq1  GTTTCCCTGATACTTTTATTAACGATCCAGAAACACATCACTAAACCCTA  148
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTATCCCTGATAC-TTTATTAACGATCCAGAAACACATCACTAAACCCTA  140

seq1  AACATGCCATGTATTTAAGAGTACGAATGGAATTCATATATTTTTGTCAG  198
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  AACATGCCATGTATTT-AGAGTACGAATGGAATTCATATA-TTTTGTCAG  188

seq1  TAGGCTATTTGGAAGAGTTTGGATTTTGTTTCCCTTATTTTGCTTTCTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTATTTGGAAGAGTTTGGATTTTGTTTCCCTTATTTTGCTTTCTGA  238

seq1  GATGGTCTCTTGTTCTATATGTAGCTCAGGCTGGCCCCCCCACTCTAGAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTCTTGTTCTATATGTAGCTCAGGCTGGCCCCCCCACTCTAGAT  288

seq1  CTTCCTGCTTTAGCCCCCAGAATGC-AGGCGTCTCGGATAATATGGCACA  347
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTTCCTGCTTTAGCCCCCAGAATGCAAGGCGTCTCGGATAATATGGCACA  338

seq1  GCTCCAGACCAGGAGCTCAGATTCTTCTTCTTTCTACACAATAATGGGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGACCAGGAGCTCAGATTCTTCTTCTTTCTACACAATAATGGGTC  388

seq1  TCATTGTGACATTTTTTTTAAATGACATATTTCATCTAGCCCTTTCTCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGACATTTTTTTTAAATGACATATTTCATCTAGCCCTTTCTCTA  438

seq1  AAAGGTCCCTCATTTCAAATTTGAGTTTGAGCATTATATCCCAGGCTGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCCCTCATTTCAAATTTGAGTTTGAGCATTATATCCCAGGCTGGT  488

seq1  TTAAAGCAGGTCTCACTCTCCTGCTGGCCAATTTGTGTATCATTTGGGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAGGTCTCACTCTCCTGCTGGCCAATTTGTGTATCATTTGGGAA  538

seq1  CTCCTTGGAAGCTGCCTGACTGGCTTTGAACACTGGACTCTTCCACACTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGAAGCTGCCTGACTGGCTTTGAACACTGGACTCTTCCACACTG  588

seq1  TTCAGGTCTATCCTGAGTACCTAAGATGTCATCATCATAAATGAAATAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTCTATCCTGAGTACCTAAGATGTCATCATCATAAATGAAATAGA  638

seq1  GAAGTGTCTTTGACTTTGCTGTCAAGACTTTTTGTTGCTGCTTGAACAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTCTTTGACTTTGCTGTCAAGACTTTTTGTTGCTGCTTGAACAAA  688

seq1  AGAAGCGCCTATTCAAACTGCAGTTTTAGAGTTCAGGTGACATCCGGCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCGCCTATTCAAACTGCAGTTTTAGAGTTCAGGTGACATCCGGCCT  738

seq1  GTGAAGCCTGCAAGTATCTCAGACCTAGCATCCAGCTGTTTCCTGTGACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCCTGCAAGTATCTCAGACCTAGCATCCAGCTGTTTCCTGTGACT  788

seq1  CTCACCTCCATTCCCCAGACCACTGAGCCGAGCCTGTGTGTGCAGCACAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTCCATTCCCCAGACCACTGAGCCGAGCCTGTGTGTGCAGCACAG  838

seq1  CATAGCTACTTGAGTAGTTCGTGCCAACTGCTTCTGGCTAATGTTTGGTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTACTTGAGTAGTTCGTGCCAACTGCTTCTGGCTAATGTTTGGTT  888

seq1  TAGCTATTTTAACAAAACAAAAAAACTGAGTGTCTGCTGCTGTGTCATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATTTTAACAAAACAAAAAAACTGAGTGTCTGCTGCTGTGTCATTT  938

seq1  ACTACCAGTTTTTTGTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAGTTTTTTGTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTT  988

seq1  TATTTCGAGAGGTGTAATTTAAAAGGGTTTACACTGCCCAAATTAAAGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGAGAGGTGTAATTTAAAAGGGTTTACACTGCCCAAATTAAAGAA  1038

seq1  AAAAAATAATTTATAAAAGATGACT--GCTAAAATTAGGAATTC  1089
      |||||||||||||||||||||||||    |||||||||||||||
seq2  AAAAAATAATTTATAAAAGATGACTAACATAAAATTAGGAATTC  1082