BAC Information

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BAC

Clone NameB6Ng01-333D22
Chromosome10 (Build37)
Map Location 91,634,616 - 91,838,063
singlet/doubletdoublet
Overlap geneLOC667203
Upstream geneLOC100041769, LOC100041799
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333D22.bB6Ng01-333D22.g
ACCGA119112GA119113
length1,1551,148
definitionB6Ng01-333D22.b B6Ng01-333D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,836,905 - 91,838,063)(91,634,616 - 91,635,769)
sequence
gaattcatcagaatgaaatattgactactaattaagggaagaaaattact
cctggaataaattgataaaggtcagtttccttactcagagtttctctgtg
tgtctggtgttatcagtgttataaataaggatgaaaatccacctgtttgt
cagagcaggcaaaggaaacccattcttgggggttcttgcttttgtactga
atttcaattaaacttttctattgtgctttctcttcttggcattctttttc
ttccccttctcttttgagatgagaaaaatgatgtgtattaaaagcaatta
ggatgcactctttttatcctcaaggaaggcaatttgtgtatttattggta
taagagaattaaaaccgtaaaacaatcgtccttagaaatcctatttctta
tcaaaagagtatgtctttcgcaggtaataggcagttcttgggaaagcatc
tttctgttttggatgagaaaactcaaagtaaatcaaaatactgtaataaa
agaaataatcaaagaaatagcttcagctgtgattttggcagagtgaatat
gtatttaaatatttaacaccccttttatctttacctgttcctgatgcata
aatggggaattggaatgaaatgaaacaagctgctactgtctttgaatcaa
aggtgggcacagtgctcaggttttgaatttctgggttcttcttaacctac
agaggtacccatcatgccgcactgatgaaataggtgccgagttacattat
tgattagggtttggtgttcatcaaccttgaaaaacattttgcagataatt
tccaagaccttactgtttggtaaagttaataagttgaagaaatcataacc
tttctaattgaaacatccagagacgtccccagctggacgtgatcctggtc
atatatgcagatgatctgtcgaaaattgggggaaggtactgctagcatct
ggaggggagaggtgtgggaggctaccaaacacctgacagtgtaaagtacc
tcggcccagcaaagagtcccgtgctcacacatattacactcaggtgctga
gagtcttcatttagagaaacatgatagatatggttcaagtatttatgact
tccacacttaaactttctacactggcaaaatgaaattaattaaaaattga
gctct

gaattcttgtcagggagttgtggatatatgacaaataaacttttagcccc
aaatgccttttcacatcacgaggaaatgaatctcactgtcgattattact
gaactgagtgtttttatttctatatattactgtatggagatggcaatcaa
tataagaataattgtcacttaagaaaaaaaaccatttccatgaaagtagt
aaagatacatttcattatacgcttcacattaaaacctaatttctatatag
atattgagacccaggagcttcattttatagttactacaacctacacttta
ttcaattctcatactttcttctgttaaaatgtccaaggaatgttcagttt
aaattggctagctaatatctgaattcttagccttaacaaaattacgtgtc
atgggaaaattagtcttattctctctcttttttttcatagactctacttc
attctagttttaaaaattatactatcaacctggaaaataagtaaaagata
gactctgaagcaaaatataaggactagcatgtattattagaattcttaag
acatagtagaacaggtagacatgggctaaagactacttttggcaacatta
tttgaaggtaaagagagagtgatttcctatactttggcaaggagcataac
tctaagagaatacaaactctcattaacactgagattttgtgtcaatctat
gggataatgttaaacttcatcatctaaaaccagagcccaagaagcagtaa
aatctatcatctaaattcccagttcagtccctgaaaaggtcttcttaaac
tcattacatggcagacctttgggcaagtgtatgtggggggagcatgtttc
ttgaataaaacaagccacccttttattttcgcagcaacttccaatttggg
gtaggagttgcttggagtgaaggaaaatttagttagctaataaaacatca
cattttatttttttaattagggaaaatagcatgtctttgagcagacatct
gtaatctgagatgtgggctgtgtgggagaaatgttcagaccagcaagatc
attctgtgtttgaaaagagaatactgtcgtgcataccatgagtagtaaac
gatgttgagaaatgaaaactgggtcgatcatttcatgtcacctgcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91836905_91838063
seq2: B6Ng01-333D22.b_49_1202 (reverse)

seq1  GAGCTC-ATTTTTATTTTAATTCATTTTTTCCCAGTG-AG-AAGTTTCAG  47
      |||||| ||||||| || | ||||  |||| |||||| || |||||| ||
seq2  GAGCTCAATTTTTAATTAATTTCA--TTTTGCCAGTGTAGAAAGTTTAAG  48

seq1  TGTGG-AGTCATAATTACCTTTGAACAATATCTAATCATGTTTCTCTAAA  96
      ||||| |||||||| |||  |||||| |||||| ||||||||||||||||
seq2  TGTGGAAGTCATAAATAC--TTGAACCATATCT-ATCATGTTTCTCTAAA  95

seq1  TGAAGGCTCTCAGCACCTGAGTGTTAATATGTGTGAGCACGGGACTCTTT  146
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGAAGACTCTCAGCACCTGAGTG-TAATATGTGTGAGCACGGGACTCTTT  144

seq1  GCTGGGGCCGGGGTACCTTTTCCACTGTCAGGTGTTTGGTAGCCTCCCAC  196
      ||| |||||| |||||  ||| ||||||||||||||||||||||||||||
seq2  GCT-GGGCCGAGGTAC--TTTACACTGTCAGGTGTTTGGTAGCCTCCCAC  191

seq1  ACCTCTCCCCTCCAGATGCTAGCAGTACCTTCCCCCAATTTTCGACAGAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCCCTCCAGATGCTAGCAGTACCTTCCCCCAATTTTCGACAGAT  241

seq1  CATCTGCATATATGACCAGGATCACGTCCAGCTGGGGACGTCTCTGGATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCATATATGACCAGGATCACGTCCAGCTGGGGACGTCTCTGGATG  291

seq1  TTTCAATTAGAAAGGTTATGATTTCTTCAACTTATTAACTTTACCAAACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTAGAAAGGTTATGATTTCTTCAACTTATTAACTTTACCAAACA  341

seq1  GTAAGGTCTTGGAAATTATCTGCAAAATGTTTTTCAAGGTTGATGAACAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTCTTGGAAATTATCTGCAAAATGTTTTTCAAGGTTGATGAACAC  391

seq1  CAAACCCTAATCAATAATGTAACTCGGCACCTATTTCATCAGTGCGGCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTAATCAATAATGTAACTCGGCACCTATTTCATCAGTGCGGCAT  441

seq1  GATGGGTACCTCTGTAGGTTAAGAAGAACCCAGAAATTCAAAACCTGAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTACCTCTGTAGGTTAAGAAGAACCCAGAAATTCAAAACCTGAGC  491

seq1  ACTGTGCCCACCTTTGATTCAAAGACAGTAGCAGCTTGTTTCATTTCATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCCCACCTTTGATTCAAAGACAGTAGCAGCTTGTTTCATTTCATT  541

seq1  CCAATTCCCCATTTATGCATCAGGAACAGGTAAAGATAAAAGGGGTGTTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCCCCATTTATGCATCAGGAACAGGTAAAGATAAAAGGGGTGTTA  591

seq1  AATATTTAAATACATATTCACTCTGCCAAAATCACAGCTGAAGCTATTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAATACATATTCACTCTGCCAAAATCACAGCTGAAGCTATTTC  641

seq1  TTTGATTATTTCTTTTATTACAGTATTTTGATTTACTTTGAGTTTTCTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTATTTCTTTTATTACAGTATTTTGATTTACTTTGAGTTTTCTCA  691

seq1  TCCAAAACAGAAAGATGCTTTCCCAAGAACTGCCTATTACCTGCGAAAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACAGAAAGATGCTTTCCCAAGAACTGCCTATTACCTGCGAAAGA  741

seq1  CATACTCTTTTGATAAGAAATAGGATTTCTAAGGACGATTGTTTTACGGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCTTTTGATAAGAAATAGGATTTCTAAGGACGATTGTTTTACGGT  791

seq1  TTTAATTCTCTTATACCAATAAATACACAAATTGCCTTCCTTGAGGATAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCTCTTATACCAATAAATACACAAATTGCCTTCCTTGAGGATAA  841

seq1  AAAGAGTGCATCCTAATTGCTTTTAATACACATCATTTTTCTCATCTCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGCATCCTAATTGCTTTTAATACACATCATTTTTCTCATCTCAA  891

seq1  AAGAGAAGGGGAAGAAAAAGAATGCCAAGAAGAGAAAGCACAATAGAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGGGGAAGAAAAAGAATGCCAAGAAGAGAAAGCACAATAGAAAA  941

seq1  GTTTAATTGAAATTCAGTACAAAAGCAAGAACCCCCAAGAATGGGTTTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTGAAATTCAGTACAAAAGCAAGAACCCCCAAGAATGGGTTTCC  991

seq1  TTTGCCTGCTCTGACAAACAGGTGGATTTTCATCCTTATTTATAACACTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGCTCTGACAAACAGGTGGATTTTCATCCTTATTTATAACACTG  1041

seq1  ATAACACCAGACACACAGAGAAACTCTGAGTAAGGAAACTGACCTTTATC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACCAGACACACAGAGAAACTCTGAGTAAGGAAACTGACCTTTATC  1091

seq1  AATTTATTCCAGGAGTAATTTTCTTCCCTTAATTAGTAGTCAATATTTCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCCAGGAGTAATTTTCTTCCCTTAATTAGTAGTCAATATTTCA  1141

seq1  TTCTGATGAATTC  1159
      |||||||||||||
seq2  TTCTGATGAATTC  1154


seq1: chr10_91634616_91635769
seq2: B6Ng01-333D22.g_64_1211

seq1  GAATTCTTGTCAGGGAGTTGTGGATATATGACAAATAAACTTTTAGCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCAGGGAGTTGTGGATATATGACAAATAAACTTTTAGCCCC  50

seq1  AAATGCCTTTTCACATCACGAGGAAATGAATCTCACTGTCGATTATTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTTTTCACATCACGAGGAAATGAATCTCACTGTCGATTATTACT  100

seq1  GAACTGAGTGTTTTTATTTCTATATATTACTGTATGGAGATGGCAATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAGTGTTTTTATTTCTATATATTACTGTATGGAGATGGCAATCAA  150

seq1  TATAAGAATAATTGTCACTTAAGAAAAAAAACCATTTCCATGAAAGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAATAATTGTCACTTAAGAAAAAAAACCATTTCCATGAAAGTAGT  200

seq1  AAAGATACATTTCATTATACGCTTCACATTAAAACCTAATTTCTATATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACATTTCATTATACGCTTCACATTAAAACCTAATTTCTATATAG  250

seq1  ATATTGAGACCCAGGAGCTTCATTTTATAGTTACTACAACCTACACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGACCCAGGAGCTTCATTTTATAGTTACTACAACCTACACTTTA  300

seq1  TTCAATTCTCATACTTTCTTCTGTTAAAATGTCCAAGGAATGTTCAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTCATACTTTCTTCTGTTAAAATGTCCAAGGAATGTTCAGTTT  350

seq1  AAATTGGCTAGCTAATATCTGAATTCTTAGCCTTAACAAAATTACGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCTAGCTAATATCTGAATTCTTAGCCTTAACAAAATTACGTGTC  400

seq1  ATGGGAAAATTAGTCTTATTCTCTCTCTTTTTTTTCATAGACTCTACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAATTAGTCTTATTCTCTCTCTTTTTTTTCATAGACTCTACTTC  450

seq1  ATTCTAGTTTTAAAAATTATACTATCAACCTGGAAAATAAGTAAAAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGTTTTAAAAATTATACTATCAACCTGGAAAATAAGTAAAAGATA  500

seq1  GACTCTGAAGCAAAATATAAGGACTAGCATGTATTATTAGAATTCTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGAAGCAAAATATAAGGACTAGCATGTATTATTAGAATTCTTAAG  550

seq1  ACATAGTAGAACAGGTAGACATGGGCTAAAGACTACTTTTGGCAACATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTAGAACAGGTAGACATGGGCTAAAGACTACTTTTGGCAACATTA  600

seq1  TTTGAAGGTAAAGAGAGAGTGATTTCCTATACTTTGGCAAGGAGCATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGTAAAGAGAGAGTGATTTCCTATACTTTGGCAAGGAGCATAAC  650

seq1  TCTAAGAGAATACAAACTCTCATTAACACTGAGATTTTGTGTCAATCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGAATACAAACTCTCATTAACACTGAGATTTTGTGTCAATCTAT  700

seq1  GGGATAATGTTAAACTTCATCATCTAAAACCAGAGCCCAAGAAGCAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAATGTTAAACTTCATCATCTAAAACCAGAGCCCAAGAAGCAGTAA  750

seq1  AATCTATCATCTAAATTCCCAGTTCAGTCCCTGAAAA-GTCTTCTTAAAC  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATCTATCATCTAAATTCCCAGTTCAGTCCCTGAAAAGGTCTTCTTAAAC  800

seq1  TCATTACATGGCAGACCTTTGGGCAAGTGTATGTGGGGGGAGCATGTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACATGGCAGACCTTTGGGCAAGTGTATGTGGGGGGAGCATGTTTC  850

seq1  TTGAATAAAACAAGCCACCC--TTACATTCACAG-AACTTCCAATTT-GG  895
      ||||||||||||||||||||  |||  ||| ||| |||||||||||| ||
seq2  TTGAATAAAACAAGCCACCCTTTTATTTTCGCAGCAACTTCCAATTTGGG  900

seq1  GTAGGAGTTGC-TGGAGTGATGGAAAA-TTAGTTAGCTAATAAAACATCA  943
      ||||||||||| |||||||| |||||| ||||||||||||||||||||||
seq2  GTAGGAGTTGCTTGGAGTGAAGGAAAATTTAGTTAGCTAATAAAACATCA  950

seq1  CATTT--ATTTTTTAATTAGGGAAAATAGCAATGTCTTTGAAGCAGACAT  991
      |||||   |||||||||||||||||||||| ||||||||| |||||||||
seq2  CATTTTATTTTTTTAATTAGGGAAAATAGC-ATGTCTTTG-AGCAGACAT  998

seq1  CTGTAATCTGAGATGTGGGCTGTGTGGGAGAAATGTTCCAGACACAGCAA  1041
      ||||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  CTGTAATCTGAGATGTGGGCTGTGTGGGAGAAATGTT-CAGAC-CAGCAA  1046

seq1  GATCATTCTGTGTTTGAAAAAGGAGAATACTGTCGTGCATACAATGAGGT  1091
      ||||||||||||||||||||  |||||||||||||||||||| |||||  
seq2  GATCATTCTGTGTTTGAAAA--GAGAATACTGTCGTGCATACCATGAG--  1092

seq1  AAGTAAACGGATGGTTGGAGAAATGAAAACTGGGGTTCAGATCAATTTCA  1141
       ||||||| ||||  | |||||||||||||||||  || |||| ||||||
seq2  TAGTAAAC-GATG--TTGAGAAATGAAAACTGGG--TC-GATC-ATTTCA  1135

seq1  TGCCAGCTGCAAG  1154
      || || |||||||
seq2  TGTCACCTGCAAG  1148


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