BAC Information

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BAC

Clone NameB6Ng01-333N07
Chromosome10 (Build37)
Map Location 16,218,709 - 16,219,879
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439, LOC382457
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333N07.bB6Ng01-333N07.g
ACCGA119493GA119494
length1,2391,154
definitionB6Ng01-333N07.b B6Ng01-333N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattgtgtatatgaaccatatttttttttgtattcattcttctg
ttgaggacatctgggtgttttccagcttctggctagttaaaaaaaaaaag
gctgctatgaacacagtggagcatgcatccttgttatatgatggagcatt
ttgggtatatgccctggcaaagtacacctggctcatcaagtagaactatt
ttcaattttctcaggaatcaccagactgatttccaaagtggttttaacta
gtgtgcagtctcaccagcaatagaggagtgtttctctttctctgaatctt
tgcaacatctgctgtcacctgtgttttttatcttagtcattctgactggt
gtgaggtggaacctcggggtccttttgatttgcatttccatgatgactaa
ggatgttgaacatttctttctttttttttcttaatatctcttttttatcc
ttttttttcttcgatattttctttatttacatttcaaatactatcccgaa
tgttccctgtaccctccccctgccctgctcccctacccacccactcccac
ttcttggtcctggcgtttccctgtactggggcatataaagtttgtgtctc
tctgccattcaagattccttgattgaaaattctctatttagctctgtact
ccacttttttaatagagttattggttctctggagcctaccttcttaactt
ctttgcatattttggatattacccctctatcagatgtagggttggtaaac
atcttttcccaatcagggggttaccgttttgttctattgctagtgactct
tgctttgcagaagcttttaaattttaagtggttgcatttgtctatcgttg
ctctgacagcataagccattgatgttctgttcaggaagtttttccttgtg
cccaagtatctgaggctcttctcccactttctctttattagattcagtgt
atcacatttcatgtgaaggtccttgatccacttggacttgagctttgttc
aagagatagtatgatcatttcattcttctacctgccactgaaccagcacc
atttgtgaaaagctgttctttttcactgatgattttggttcttgtcaaga
tcaatgacataagtggtgaagttcaagttcggttcaaatcaatcatgaac
cacttgcctgttcctaaacaaatcagcgtttatacaatattcatgatagc
tggaggtcagagtgtgaattttccccgaatacctctcta

gaattctgagttagtgaatgactaaccagtattttcatcctgaataatga
tagacctactagacagtcgtaactagattttccatttcttccctgacaac
agcacatggttgtgatgtcaaaagtcctttaaatagacacatatacaaag
tctgaatgttccagtcttgcttattttcctctcaatgataacctcaacac
aaaggtatcaactttggtcacagccttatttttgtagggaactttagcta
tcaggtttcttaatgtgaaattccatcgtctttcttgttagtcttagttt
ttctccagagttaaagcttgtagtcacaaagaataagagatcaatctaat
atgccattttgaaactttgttctatttaagatgagtagttttctcaaagg
ggaaacatattatgcatcagactgaaacaaaatattattgctgacaagaa
agagactttaaaatgagctcctatgacagcaaagtgaattttaagacaat
acaaaagctcgcttctctccagtaaaatacatatttctgtctattgatct
gagatataaagtgcttaccgctctgctatcaaagtaacaagaaaatacat
ttctagtcagtctaagagcttgataaacatatctgcattacagggcactc
cactatgtgtcttctttgtctatgtgatgagatctgcttacaaatttaca
atcactaataaagcaaatgggtaaatgaaacaggtatttttacaatattt
gtgatattttgattaagtgcttaaatgttttagagtgtttcatcaagttc
atgcctcagagaggtatttattcctaaatgtgtaatagagggcaaaatga
cagcctcaagtcagatgacgcattgacttaaatcaaattagtgacatcca
ggttagtgtgagctgagaggaatttgaaatatgagcataaatctgcaatt
atttgcttttatttcattctatatttcagtaccatgaaagattacagatg
aggttcactcttctttttatgttataatataaattcattcagctctcatg
cagttatagtttccatggacaacttgatattcttctgaccgcactaaagt
acttttcattagaagactgatcttttcgcagaatgtcttctgaacttgac
tttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16218709_16219879
seq2: B6Ng01-333N07.g_67_1220

seq1  GAATTCTGAGTTAGTGAATGACTAACCAGTATTTTCATCCTGAATAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTTAGTGAATGACTAACCAGTATTTTCATCCTGAATAATGA  50

seq1  TAGACCTACTAGACAGTCGTAACTAGATTTTCCATTTCTTCCCTGACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTACTAGACAGTCGTAACTAGATTTTCCATTTCTTCCCTGACAAC  100

seq1  AGCACATGGTTGTGATGTCAAAAGTCCTTTAAATAGACACATATACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGGTTGTGATGTCAAAAGTCCTTTAAATAGACACATATACAAAG  150

seq1  TCTGAATGTTCCAGTCTTGCTTATTTTCCTCTCAATGATAACCTCAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGTTCCAGTCTTGCTTATTTTCCTCTCAATGATAACCTCAACAC  200

seq1  AAAGGTATCAACTTTGGTCACAGCCTTATTTTTGTAGGGAACTTTAGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATCAACTTTGGTCACAGCCTTATTTTTGTAGGGAACTTTAGCTA  250

seq1  TCAGGTTTCTTAATGTGAAATTCCATCGTCTTTCTTGTTAGTCTTAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTCTTAATGTGAAATTCCATCGTCTTTCTTGTTAGTCTTAGTTT  300

seq1  TTCTCCAGAGTTAAAGCTTGTAGTCACAAAGAATAAGAGATCAATCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAGTTAAAGCTTGTAGTCACAAAGAATAAGAGATCAATCTAAT  350

seq1  ATGCCATTTTGAAACTTTGTTCTATTTAAGATGAGTAGTTTTCTCAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATTTTGAAACTTTGTTCTATTTAAGATGAGTAGTTTTCTCAAAGG  400

seq1  GGAAACATATTATGCATCAGACTGAAACAAAATATTATTGCTGACAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATATTATGCATCAGACTGAAACAAAATATTATTGCTGACAAGAA  450

seq1  AGAGACTTTAAAATGAGCTCCTATGACAGCAAAGTGAATTTTAAGACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTTAAAATGAGCTCCTATGACAGCAAAGTGAATTTTAAGACAAT  500

seq1  ACAAAAGCTCGCTTCTCTCCAGTAAAATACATATTTCTGTCTATTGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCTCGCTTCTCTCCAGTAAAATACATATTTCTGTCTATTGATCT  550

seq1  GAGATATAAAGTGCTTACCGCTCTGCTATCAAAGTAACAAGAAAATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATAAAGTGCTTACCGCTCTGCTATCAAAGTAACAAGAAAATACAT  600

seq1  TTCTAGTCAGTCTAAGAGCTTGATAAACATATCTGCATTACAGGGCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCAGTCTAAGAGCTTGATAAACATATCTGCATTACAGGGCACTC  650

seq1  CACTATGTGTCTTCTTTGTCTATGTGATGAGATCTGCTTACAAATTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGTGTCTTCTTTGTCTATGTGATGAGATCTGCTTACAAATTTACA  700

seq1  ATCACTAATAAAGCAAATGGGTAAATGAAACAGGTATTTTTACAATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAATAAAGCAAATGGGTAAATGAAACAGGTATTTTTACAATATTT  750

seq1  GTGATATTTTGATTAAGTGCTTAAATGTTTTAGAGTGTTTCATCAAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATTTTGATTAAGTGCTTAAATGTTTTAGAGTGTTTCATCAAGTTC  800

seq1  ATGCCTCAGAGAGGTATTTATTCCTAAATGTGTAATAGAGGGCAAAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCAGAGAGGTATTTATTCCTAAATGTGTAATAGAGGGCAAAATGA  850

seq1  CAGCCTCAAGTCAGATGACGCATTGACTTAAATCAAATTAGTGACATCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCAAGTCAGATGACGCATTGACTTAAATCAAATTAGTGACATCCA  900

seq1  GGTTAGTGTGAGCTGAGAGGAATTTGAAATATGAGCATAAAATCTGCAAT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTTAGTGTGAGCTGAGAGGAATTTGAAATATGAGCAT-AAATCTGCAAT  949

seq1  TATTTGCTTTTATTTTCATTCTATATTTCAGTACCATGAAAAGATTACAA  1000
      |||||||||||| ||||||||||||||||||||||||| ||||||||| |
seq2  TATTTGCTTTTA-TTTCATTCTATATTTCAGTACCATG-AAAGATTAC-A  996

seq1  GATGAGGTTCAACTC-TCTTTTTATGTTATAATATAAAATTCATTCAGCT  1049
      |||||||||| |||| ||||||||||||||||||| ||||||||||||| 
seq2  GATGAGGTTC-ACTCTTCTTTTTATGTTATAATAT-AAATTCATTCAGC-  1043

seq1  TCTCCATGCAAGTTTATAGTTTCCCATGGACAACTGGTTATTCTTCTTGA  1099
      ||| ||||||   ||||||||| |||||||||||| | |||||||| |||
seq2  TCT-CATGCA--GTTATAGTTT-CCATGGACAACTTGATATTCTTC-TGA  1088

seq1  CGCCACTTAAAAGTACTTTTCAATTAGAAGACTACATC-TTTCGCAGAAT  1148
      |  ||||  |||||||||||| |||||||||||  ||| |||||||||||
seq2  CCGCACT--AAAGTACTTTTC-ATTAGAAGACT-GATCTTTTCGCAGAAT  1134

seq1  GTCTTCCTGAGACTTGACCTTTC  1171
      ||||| |||| |||||| |||||
seq2  GTCTT-CTGA-ACTTGA-CTTTC  1154


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