BAC Information

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BAC

Clone NameB6Ng01-334D02
Chromosome10 (Build37)
Map Location 17,137,535 - 17,324,354
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382457, LOC546472, LOC100039576, LOC627511
Downstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646, Nhsl1, Hebp2, EG627729, D10Bwg1379e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334D02.bB6Ng01-334D02.g
ACCGA119758GA119759
length6831,119
definitionB6Ng01-334D02.b B6Ng01-334D02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,323,672 - 17,324,354)(17,137,535 - 17,138,664)
sequence
gaattccaacatatgtctagaaacagagtacttaaggtcttgcttcccaa
gctttatgtcatattgcttaggatttgctttctgaatttggcactgagct
gtgctctcctcattgtgaataggaacccaggttatgtcatctactctcta
aaggtacttgagggaacaaaagtaagatgtactataggcttaactaccta
taggcattgacctaggcataatcttggtgggagcattatctaaacaaaga
aggcatgaacgtgttccagttgaagctgtccctttatccttccaaaccag
atcttccagttcattctgaggcattttctgggtgttctcaaactgtagct
gacgttctttctcccttgttgctttgcaattttacttctgcaaacttttc
ttcttttctagtaaggggccattccaccttgcaatccctcatgggactgg
ttctgtccagacctttagcatctctttctcctagtccccaatttctgcac
tctttgacagaggttctaagggtgctgctcagtcaactttgcacagatgc
ttaactctcagaggatctttcttgaggacaacacccacgacattcagact
taagtcttttctcgtcttttctcgtcttttctcgtcttttctcgtctctt
ctcttctcttctcttctcttctcttctcttatc

gaattcaatctccagtctctaaaacctacatggcagaaggagaaaagaac
tgcatcttgttctcttgattccatatatgtgccatgcatgccaataaaca
gatacacacacagacagaaggaggtgagagagagacagagacagacagac
agactgagagagggagggagatacacagaaagaggcagagagaaacacag
agagaaaataaataaagtaattttaaagcgtaataaaaatataacaaagt
gggcagtgtcaggggacagacagaattgttctccagtctccacatgcttg
ggtatgtagtgtgaatgcatgcgcacacacacaacacatgcaccttcaca
cacatgaacatgcacacacacagaaacacagacactgggattgtggctta
agacaaacatgaatatttctaaagtgattcattatattgttcataatcta
attcttggagttcctgccctgtactctgtctttaagcaagcagttgcagt
tcagccagtagtcattgctatgtgctccagtttttagtttgaacttggag
ggaggcacacattttcttctgttgtactggattacataatggctcgatgt
actaactttagtgacagaaaccataaaattggccccacgtcagaagttct
ccttttccacttcactggctgactcaaggcggaaccacttagcccagggg
tcttttgtgagtttgctgctccactctgaaagtcacctacctctcgggct
taagagctgcatcgttttgtggatttttctgctagaaatcagacaaccaa
tggcactctttcatctggtttctaaccagggtttgtagccatctaattca
caaaatctggagtttccattcatgtcatttggcttccctttcgcttcctc
attgaatgtcaaccataagctttccctggccttacacgtttatgagagtt
ctggcatctctcagacattcatataattggtgttaaaattataaaaatcg
tagctcttttaaaacaacattttagagtggtgatcttttaaaataaattg
tatggctaatctgtcccattgacttcacttgcaatacattctttcctctc
aacataatactttatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_17323672_17324354
seq2: B6Ng01-334D02.b_50_732 (reverse)

seq1  GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAAAAGAC  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAAAAGAC  50

seq1  GAGAAAAGACGAGAAAAGACGAGAAAAGACTTAAGTCTGAATGTCGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGACGAGAAAAGACGAGAAAAGACTTAAGTCTGAATGTCGTGGG  100

seq1  TGTTGTCCTCAAGAAAGATCCTCTGAGAGTTAAGCATCTGTGCAAAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCTCAAGAAAGATCCTCTGAGAGTTAAGCATCTGTGCAAAGTTG  150

seq1  ACTGAGCAGCACCCTTAGAACCTCTGTCAAAGAGTGCAGAAATTGGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCAGCACCCTTAGAACCTCTGTCAAAGAGTGCAGAAATTGGGGAC  200

seq1  TAGGAGAAAGAGATGCTAAAGGTCTGGACAGAACCAGTCCCATGAGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAAGAGATGCTAAAGGTCTGGACAGAACCAGTCCCATGAGGGAT  250

seq1  TGCAAGGTGGAATGGCCCCTTACTAGAAAAGAAGAAAAGTTTGCAGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGTGGAATGGCCCCTTACTAGAAAAGAAGAAAAGTTTGCAGAAGT  300

seq1  AAAATTGCAAAGCAACAAGGGAGAAAGAACGTCAGCTACAGTTTGAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGCAAAGCAACAAGGGAGAAAGAACGTCAGCTACAGTTTGAGAAC  350

seq1  ACCCAGAAAATGCCTCAGAATGAACTGGAAGATCTGGTTTGGAAGGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAAATGCCTCAGAATGAACTGGAAGATCTGGTTTGGAAGGATAA  400

seq1  AGGGACAGCTTCAACTGGAACACGTTCATGCCTTCTTTGTTTAGATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGCTTCAACTGGAACACGTTCATGCCTTCTTTGTTTAGATAATG  450

seq1  CTCCCACCAAGATTATGCCTAGGTCAATGCCTATAGGTAGTTAAGCCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCAAGATTATGCCTAGGTCAATGCCTATAGGTAGTTAAGCCTAT  500

seq1  AGTACATCTTACTTTTGTTCCCTCAAGTACCTTTAGAGAGTAGATGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATCTTACTTTTGTTCCCTCAAGTACCTTTAGAGAGTAGATGACAT  550

seq1  AACCTGGGTTCCTATTCACAATGAGGAGAGCACAGCTCAGTGCCAAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGTTCCTATTCACAATGAGGAGAGCACAGCTCAGTGCCAAATTC  600

seq1  AGAAAGCAAATCCTAAGCAATATGACATAAAGCTTGGGAAGCAAGACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAAATCCTAAGCAATATGACATAAAGCTTGGGAAGCAAGACCTT  650

seq1  AAGTACTCTGTTTCTAGACATATGTTGGAATTC  683
      |||||||||||||||||||||||||||||||||
seq2  AAGTACTCTGTTTCTAGACATATGTTGGAATTC  683


seq1: chr10_17137535_17138664
seq2: B6Ng01-334D02.g_68_1186

seq1  GAATTCAATCTCCAGTCTCTAAAACCTACATGGCAGAAGGAGAAAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTCCAGTCTCTAAAACCTACATGGCAGAAGGAGAAAAGAAC  50

seq1  TGCATCTTGTTCTCTTGATTCCATATATGTGCCATGCATGCCAATAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTGTTCTCTTGATTCCATATATGTGCCATGCATGCCAATAAACA  100

seq1  GATACACACACAGACAGAAGGAGGTGAGAGAGAGACAGAGACAGACAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACACACAGACAGAAGGAGGTGAGAGAGAGACAGAGACAGACAGAC  150

seq1  AGACTGAGAGAGGGAGGGAGATACACAGAAAGAGGCAGAGAGAAACACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAGAGAGGGAGGGAGATACACAGAAAGAGGCAGAGAGAAACACAG  200

seq1  AGAGAAAATAAATAAAGTAATTTTAAAGCGTAATAAAAATATAACAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATAAATAAAGTAATTTTAAAGCGTAATAAAAATATAACAAAGT  250

seq1  GGGCAGTGTCAGGGGACAGACAGAATTGTTCTCCAGTCTCCACATGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGTCAGGGGACAGACAGAATTGTTCTCCAGTCTCCACATGCTTG  300

seq1  GGTATGTAGTGTGAATGCATGCGCACACACACAACACATGCACCTTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTAGTGTGAATGCATGCGCACACACACAACACATGCACCTTCACA  350

seq1  CACATGAACATGCACACACACAGAAACACAGACACTGGGATTGTGGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAACATGCACACACACAGAAACACAGACACTGGGATTGTGGCTTA  400

seq1  AGACAAACATGAATATTTCTAAAGTGATTCATTATATTGTTCATAATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAACATGAATATTTCTAAAGTGATTCATTATATTGTTCATAATCTA  450

seq1  ATTCTTGGAGTTCCTGCCCTGTACTCTGTCTTTAAGCAAGCAGTTGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGGAGTTCCTGCCCTGTACTCTGTCTTTAAGCAAGCAGTTGCAGT  500

seq1  TCAGCCAGTAGTCATTGCTATGTGCTCCAGTTTTTAGTTTGAACTTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAGTAGTCATTGCTATGTGCTCCAGTTTTTAGTTTGAACTTGGAG  550

seq1  GGAGGCACACATTTTCTTCTGTTGTACTGGATTACATAATGGCTCGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACACATTTTCTTCTGTTGTACTGGATTACATAATGGCTCGATGT  600

seq1  ACTAACTTTAGTGACAGAAACCATAAAATTGGCCCCACGTCAGAAAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTAACTTTAGTGACAGAAACCATAAAATTGGCCCCACGTCAG-AAGTTC  649

seq1  TCCTTTTCCACTTCACTGGCTGACTCAAGGCGGAACCACTTAGCCCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCCACTTCACTGGCTGACTCAAGGCGGAACCACTTAGCCCAGGG  699

seq1  GTCTTTTGTGAGTTTGCTGCTCCACTCTGAAAGTCACCTACCTCTCGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGTGAGTTTGCTGCTCCACTCTGAAAGTCACCTACCTCTCGGGC  749

seq1  TTAAGAGCTGCATCGTTTTGTGGATTTTTCTGCTAGAAATCAGACAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCTGCATCGTTTTGTGGATTTTTCTGCTAGAAATCAGACAACCA  799

seq1  ATGGCACTCTTTCATCTGGTTTCTAACCAGGGTTTGTAGCCATCTAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACTCTTTCATCTGGTTTCTAACCAGGGTTTGTAGCCATCTAATTC  849

seq1  ACAAAATCTGGAGTTTCCATTCATGTCATTTGGCTTCCCTTTCGCTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCTGGAGTTTCCATTCATGTCATTTGGCTTCCCTTTCGCTTCCT  899

seq1  CATTGAATGTCAACCATAAGCTTTCCCTGGCCTTACACGTTTATGAGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATGTCAACCATAAGCTTTCCCTGGCCTTACACGTTTATGAGAGT  949

seq1  TCTGGCATCTCTCAGACATTCAATATAATTGGTGTTAAAATTAT-AAAAT  999
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TCTGGCATCTCTCAGACATTC-ATATAATTGGTGTTAAAATTATAAAAAT  998

seq1  CGTAGCTCTTTTAAAACAACATTTAAGAGT-GTGATC-TTTAAAATAAA-  1046
      |||||||||||||||||||||||| ||||| |||||| ||||||||||| 
seq2  CGTAGCTCTTTTAAAACAACATTTTAGAGTGGTGATCTTTTAAAATAAAT  1048

seq1  TGTATGCTTAAATCTGTCCCCATTTGGCCTTTCCACCTTTGCAATTACAT  1096
      ||||||  | ||||||| ||||||  | |||  |||  |||||| |||||
seq2  TGTATGGCT-AATCTGT-CCCATT--GACTT--CAC--TTGCAA-TACAT  1089

seq1  TCTTTTCCTCCTTCAACATAATACTTTTATATTT  1130
      || |||||||  |||||||||||| |||||||||
seq2  TC-TTTCCTC--TCAACATAATAC-TTTATATTT  1119


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