BAC Information

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BAC

Clone NameB6Ng01-334D05
Chromosome10 (Build37)
Map Location 97,285,481 - 97,429,711
singlet/doubletdoublet
Overlap genenone
Upstream gene4930556N09Rik, EG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334D05.bB6Ng01-334D05.g
ACCGA119764GA119765
length4221,081
definitionB6Ng01-334D05.b B6Ng01-334D05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,285,481 - 97,285,908)(97,428,624 - 97,429,711)
sequence
agtaggttgcatgttcacaacaccacacacacacacacacacacacacac
acacacacacacacacacacactcacactcacactcacacacacttacat
ctataagccaatcctcccactcacatactcatgtagtggcttgatctgat
gctgcctgtattctagtgctaaatacccttttcccaagatgtctcgcctg
gatgagcagatcctcatgtactcaagtaatgcaatgtaaacctgttctct
catttaacccatcaataaaagtctagagcctgtgattgggcagtggaagg
agaaagatggaactggagtttcaagagagtgggttgcagggaaggagaaa
gagagagaggagagagagagaaagaagaagaagaagaagaaagaggagga
ggaggaggagggaggaggagga

gaattctgatttcaaagggatgcttagaatctgtactgatgccatctaga
aatgtaaatgctcagtgtcacactgctaaggggagaaaggtaagacgatt
tgttataggtttttatagtttttttaagcatttgaagaaacagtgtctta
ttttcaactgtctttgtcacttaatttttgttccatctctgaaaatcaaa
ctgcaaaaaacaatcatttggcaatattactgttatgtgaatttcaaatg
tgacattaatatgattacaaagaaagagaaatctcccttaagacctccac
ggtctctgaattcagctaagtgaattggaaaataagctttgcacaaatga
atgatctactagacaaaaaaaccaaaactattatatgtgccatcatatta
acataacgaaagatgatcttaagtttaattaagtggcttactagcttcat
aagtaacacaggcaagtatatattaataactgattctcaaataatttcct
gttagaaagcattttttcacacttttccaatatgaacttaaaccaaaaat
atattaaggaaatatcaattaattacaacaaaattcattattgtgttaat
atctttaaaaactgatactattagtggatcaatcctgtttcctaaatagt
atggatagttgttctgtcttaaacatgtgcattgaaagactctccttaac
tgcctctgtctgggattgacctagaaccagtgtatggatatattgcatgt
atgaggcttatagagttgcaaattattaaaccatttttttttaccaatta
gcacagtttctctgaaaatacagttttgcctagtagaaataaaagagaat
ttgatctgttaatctacaaattaaatgcaaaagacttactataatacaga
gaacagcactctgaaattgcacaactgtctagtgtgtggtcattttctct
tctgtcttcgctcaaagcatggagaagaatttcataaacatatccagaga
gagactataaacagtgaagcacagaagaaagcctgaggtggtcaagaaca
atgttcacctcctccagtatgcagaaaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97285481_97285908
seq2: B6Ng01-334D05.b_48_475

seq1  GAATTCAGTAGGTTGCATGTTCACAACACCACACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGGTTGCATGTTCACAACACCACACACACACACACACACAC  50

seq1  ACACACACACACACACACACACACACACTCACACTCACACTCACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACTCACACTCACACTCACACACAC  100

seq1  TTACATCTATAAGCCAATCCTCCCACTCACATACTCATGTAGTGGCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTATAAGCCAATCCTCCCACTCACATACTCATGTAGTGGCTTGA  150

seq1  TCTGATGCTGCCTGTATTCTAGTGCTAAATACCCTTTTCCCAAGATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGCTGCCTGTATTCTAGTGCTAAATACCCTTTTCCCAAGATGTCT  200

seq1  CGCCTGGATGAGCAGATCCTCATGTACTCAAGTAATGCAATGTAAACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGGATGAGCAGATCCTCATGTACTCAAGTAATGCAATGTAAACCTG  250

seq1  TTCTCTCATTTAACCCATCAATAAAAGTCTAGAGCCTGTGATTGGGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCATTTAACCCATCAATAAAAGTCTAGAGCCTGTGATTGGGCAGT  300

seq1  GGAAGGAGAAAGATGGAACTGGAGTTTCAAGAGAGTGGGTTGCAGGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGAAAGATGGAACTGGAGTTTCAAGAGAGTGGGTTGCAGGGAAG  350

seq1  GAGAAAGAGAGAGAGGAGAGAGAGAGAAAGAAGAAGAAGAAGAAGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAGAGGAGAGAGAGAGAAAGAAGAAGAAGAAGAAGAAAGA  400

seq1  GGAGGAGGAGGAGGAGGGAGGAGGAGGA  428
      ||||||||||||||||||||||||||||
seq2  GGAGGAGGAGGAGGAGGGAGGAGGAGGA  428


seq1: chr10_97428624_97429711
seq2: B6Ng01-334D05.g_67_1147 (reverse)

seq1  AAGTTTTCTGCATAACTGGA-GAGGTG-ACATTG-TCTTGACCACCTCAG  47
      ||||||||||||| |||||| |||||| |||||| |||||||||||||||
seq2  AAGTTTTCTGCAT-ACTGGAGGAGGTGAACATTGTTCTTGACCACCTCAG  49

seq1  GCTATC-TCTGTGGCTTTCACTGTTTAATAGTCTCTCTTCCTGGATTATG  96
      ||| || ||||||   |||||||||| |||||||||||  ||||| ||||
seq2  GCTTTCTTCTGTG--CTTCACTGTTT-ATAGTCTCTCT--CTGGA-TATG  93

seq1  TTTTATGAAATTTCTTCTCCATGCTTTGAGCGAAGGAACAGAAGAGAAAA  146
       ||||||||| ||||||||||||||||||||||||  |||||||||||||
seq2  -TTTATGAAA-TTCTTCTCCATGCTTTGAGCGAAG--ACAGAAGAGAAAA  139

seq1  TGACCACACACTAGACAGTTGTGCAATTTCAGAGTGCTGTTCTCTGTATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACACACTAGACAGTTGTGCAATTTCAGAGTGCTGTTCTCTGTATT  189

seq1  ATAGTAAGTCTTTTGCATTTAATTTGTAGATTAACAGATCAAATTCTCTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAGTCTTTTGCATTTAATTTGTAGATTAACAGATCAAATTCTCTT  239

seq1  TTATTTCTACTAGGCAAAACTGTATTTTCAGAGAAACTGTGCTAATTGGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTACTAGGCAAAACTGTATTTTCAGAGAAACTGTGCTAATTGGT  289

seq1  AAAAAAAAATGGTTTAATAATTTGCAACTCTATAAGCCTCATACATGCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATGGTTTAATAATTTGCAACTCTATAAGCCTCATACATGCAA  339

seq1  TATATCCATACACTGGTTCTAGGTCAATCCCAGACAGAGGCAGTTAAGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCATACACTGGTTCTAGGTCAATCCCAGACAGAGGCAGTTAAGGA  389

seq1  GAGTCTTTCAATGCACATGTTTAAGACAGAACAACTATCCATACTATTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTCAATGCACATGTTTAAGACAGAACAACTATCCATACTATTTA  439

seq1  GGAAACAGGATTGATCCACTAATAGTATCAGTTTTTAAAGATATTAACAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGGATTGATCCACTAATAGTATCAGTTTTTAAAGATATTAACAC  489

seq1  AATAATGAATTTTGTTGTAATTAATTGATATTTCCTTAATATATTTTTGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGAATTTTGTTGTAATTAATTGATATTTCCTTAATATATTTTTGG  539

seq1  TTTAAGTTCATATTGGAAAAGTGTGAAAAAATGCTTTCTAACAGGAAATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTCATATTGGAAAAGTGTGAAAAAATGCTTTCTAACAGGAAATT  589

seq1  ATTTGAGAATCAGTTATTAATATATACTTGCCTGTGTTACTTATGAAGCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAATCAGTTATTAATATATACTTGCCTGTGTTACTTATGAAGCT  639

seq1  AGTAAGCCACTTAATTAAACTTAAGATCATCTTTCGTTATGTTAATATGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCCACTTAATTAAACTTAAGATCATCTTTCGTTATGTTAATATGA  689

seq1  TGGCACATATAATAGTTTTGGTTTTTTTGTCTAGTAGATCATTCATTTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATATAATAGTTTTGGTTTTTTTGTCTAGTAGATCATTCATTTGT  739

seq1  GCAAAGCTTATTTTCCAATTCACTTAGCTGAATTCAGAGACCGTGGAGGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTTATTTTCCAATTCACTTAGCTGAATTCAGAGACCGTGGAGGT  789

seq1  CTTAAGGGAGATTTCTCTTTCTTTGTAATCATATTAATGTCACATTTGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGGAGATTTCTCTTTCTTTGTAATCATATTAATGTCACATTTGAA  839

seq1  ATTCACATAACAGTAATATTGCCAAATGATTGTTTTTTGCAGTTTGATTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATAACAGTAATATTGCCAAATGATTGTTTTTTGCAGTTTGATTT  889

seq1  TCAGAGATGGAACAAAAATTAAGTGACAAAGACAGTTGAAAATAAGACAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATGGAACAAAAATTAAGTGACAAAGACAGTTGAAAATAAGACAC  939

seq1  TGTTTCTTCAAATGCTTAAAAAAACTATAAAAACCTATAACAAATCGTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTCAAATGCTTAAAAAAACTATAAAAACCTATAACAAATCGTCT  989

seq1  TACCTTTCTCCCCTTAGCAGTGTGACACTGAGCATTTACATTTCTAGATG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCTCCCCTTAGCAGTGTGACACTGAGCATTTACATTTCTAGATG  1039

seq1  GCATCAGTACAGATTCTAAGCATCCCTTTGAAATCAGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTACAGATTCTAAGCATCCCTTTGAAATCAGAATTC  1081


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