BAC Information

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BAC

Clone NameB6Ng01-335P21
Chromosome10 (Build37)
Map Location 31,201,836 - 31,202,913
singlet/doubletsinglet
Overlap genenone
Upstream geneTrmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294
Downstream geneIbrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335P21.bB6Ng01-335P21.g
ACCGA121053GA121054
length1,2071,066
definitionB6Ng01-335P21.b B6Ng01-335P21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaagagatctcagaagatggaaagatctcccatgctcatagat
tggcaggattaatatagtaaaaatggccatcttgtcaaaagcaatctaca
gattcaatgcaatccccatcaaaattccaaatcaaatcttcacaaagtta
gaaatgacaatttgcaaattcacctggtataacaaaaaacgtaggatagc
aaaaactattctcaacaataaaagaacttcttcaggtagaatcaccatcc
ctgaccttaagctgtgctacagagcaattgtgataaaaactgcatggtac
tggtacagtgacagacaggtatatcaatggaatagaattgaagacccaga
aataaaaccacacacatccatggacacttaatatttgatcaaggagctaa
aaccatcctgtggaaaaaaaaagacagcattttcaacaaatgctgctggt
ataactggcagttatcatgtagaagaatgtgaattgatgcattcttatct
ccttgtactaagctcaagtctaagtggatcaaggaactccacctaaaacc
agagacactgaaacttgtagaggataaagtggtgatgagccttgaacata
tgggcacaggagaaaaattccttaacagaatagcaatggcttgtgctata
agatcaagaattgacaaatgggagctcataaaattgccaagcttttgtaa
ggcaaaggacactgtcattaaaaaaaaaaaggcaaacaacagatatggaa
aagagggctaaatcaaaaagagggctaatatcctataggtacaaagaact
caagaagctggactccagagaaccaaatcaccctattaaaacatgggggt
acagaattaaacaaagaattctcaactgaggaataccagatgggtgagaa
gcacttgaaaaatggtcaacatccttagtcatcaggtaaattcaattcaa
aacaaccctgagattccacctctcaccagtcagaatggctaggttcaaaa
actgaggtgacagcagatgctggcaagaatgtggaggaggagggacattt
cctccattgctggtggattgcaagctggtacaactactggtggaaatcag
ttgggcgggttcctcagaaatttgggacatagtattactggatgacccaa
gcttcactctggattacccgcgaaggctcttaactgggttaataaggaac
acataca
gaattcatgcagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccgggtttcggcaccaattgttattaaa
cgcgttctcacgcccggccaggaagaacaccacagaccagaatcttctgc
ggcaaaactttattgcttacatcttcaggagcaagagtgtaagaagcaag
agagagagaaaacgaaaccccgtccctattaaggagaattatccttcgcc
taggacgtgtcactccctgattggctgcagcccatcggccgagttgacgt
cacggggaaggcagagcacatggagtggagaaccaccctcggcacatgcg
cagattatttgtttaccacttagaacacagctgtcagcgccatcttgtaa
cggcgaatgtgggcgcggctcccaacacatgtacagtattgtgtaactcc
tgtaaacttcagaaaaactagcccagaaaccacagccctagctctgtggt
ctggttagactactgtgtctccttagcttgctcctgatgttcattctctg
gaagtgggatgtttggatgtcgagcaccagtacatttaacaggaagcatt
aatgggagaaaaaagaaacatgattttccttaatatcccgaaaaataata
gtgaaagatcatggagttctcaattgatccaacttgtcacaatggggaaa
gaggttgtagcaaccagccagagcacagtcctaagtgaaaagtgccccag
tgttactttatcaatcttcctgtctgatctttcatacactatcccaaaca
ttcccttaatttcagctacttgtttctccattattattcagcagacaact
attgagtacttgtagaagatgtatatgggttccctagatcctcagaagga
aaaaaaaaaaaaaaagcaagtctgtgctcagagatacataggaataaaac
aggagctgatgcagctcttaacatgctgctgcattgccatgtaaggggag
attttgcacatgctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31201836_31202913
seq2: B6Ng01-335P21.g_67_1132 (reverse)

seq1  GGACCATGTGCAAAATCTCCCCTTTACATTGCAAATGCAGCCAGCCAATG  50
      ||| |||||||||||||||||| |||||| || ||||||| ||||  |||
seq2  GGAGCATGTGCAAAATCTCCCC-TTACATGGC-AATGCAG-CAGC--ATG  45

seq1  GTTAAAGAGGCTGCACTCAGCCTCCTGTTTTATTCCCTATGTATCTCTGG  100
        | |||| |||||| |||| ||||||||||||| |||||||||||||| 
seq2  --TTAAGA-GCTGCA-TCAG-CTCCTGTTTTATT-CCTATGTATCTCTGA  89

seq1  GCACAGACTTGCCTTTTTTTTTTTTTTTCCTTCTGAGGATCTAGGGAA-C  149
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  GCACAGACTTGCTTTTTTTTTTTTTTTTCCTTCTGAGGATCTAGGGAACC  139

seq1  CATATACATCTTCTTACAAGTACTCAATAGTTGTCTGCTGAATAAATAAT  199
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  CATATACATCTTC-TACAAGTACTCAATAGTTGTCTGCTGAAT-AATAAT  187

seq1  GGAGAAACAAGTAGCTGAAATTAAGGGAATGTTTGGGATAGTGTATGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACAAGTAGCTGAAATTAAGGGAATGTTTGGGATAGTGTATGAAA  237

seq1  GATCAGACAGGAAGATTGATAAAGTAACACTGGGGCACTTTTCACTTAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGACAGGAAGATTGATAAAGTAACACTGGGGCACTTTTCACTTAGG  287

seq1  ACTGTGCTCTGGCTGGTTGCTACAACCTCTTTCCCCATTGTGACAAGTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTCTGGCTGGTTGCTACAACCTCTTTCCCCATTGTGACAAGTTG  337

seq1  GATCAATTGAGAACTCCATGATCTTTCACTATTATTTTTCGGGATATTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATTGAGAACTCCATGATCTTTCACTATTATTTTTCGGGATATTAA  387

seq1  GGAAAATCATGTTTCTTTTTTCTCCCATTAATGCTTCCTGTTAAATGTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATCATGTTTCTTTTTTCTCCCATTAATGCTTCCTGTTAAATGTAC  437

seq1  TGGTGCTCGACATCCAAACATCCCACTTCCAGAGAATGAACATCAGGAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTCGACATCCAAACATCCCACTTCCAGAGAATGAACATCAGGAGC  487

seq1  AAGCTAAGGAGACACAGTAGTCTAACCAGACCACAGAGCTAGGGCTGTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAGGAGACACAGTAGTCTAACCAGACCACAGAGCTAGGGCTGTGG  537

seq1  TTTCTGGGCTAGTTTTTCTGAAGTTTACAGGAGTTACACAATACTGTACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGCTAGTTTTTCTGAAGTTTACAGGAGTTACACAATACTGTACA  587

seq1  TGTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGC  637

seq1  TGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCGAGGGTGGTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCGAGGGTGGTTC  687

seq1  TCCACTCCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGC  737

seq1  TGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAGGATAATTCTCCTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAGGATAATTCTCCTTA  787

seq1  ATAGGGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTACACTCTTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTACACTCTTGCT  837

seq1  CCTGAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTCTGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTCTGTGG  887

seq1  TGTTCTTCCTGGCCGGGCGTGAGAACGCGTTTAATAACAATTGGTGCCGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCCTGGCCGGGCGTGAGAACGCGTTTAATAACAATTGGTGCCGA  937

seq1  AACCCGGGACGAGAAAAAACTCGGGACTGGCGCAAGGAAGATCCCTCATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGGACGAGAAAAAACTCGGGACTGGCGCAAGGAAGATCCCTCATT  987

seq1  CCAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGAC  1037

seq1  TGTTAAGAAGGATTCAACTGCATGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  TGTTAAGAAGGATTCAACTGCATGAATTC  1066