BAC Information

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BAC

Clone NameB6Ng01-337N09
Chromosome10 (Build37)
Map Location 108,575,223 - 108,576,020
singlet/doubletsinglet
Overlap genenone
Upstream genePpp1r12a, Pawr, EG667814, Syt1, EG368203
Downstream geneNav3, LOC100042497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337N09.bB6Ng01-337N09.g
ACCGA122333GA122334
length7981,030
definitionB6Ng01-337N09.b B6Ng01-337N09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcattaatatggctattgagtcaagtacaaagtcagcatagaat
tccctaatagccttcagaaatagaataatttaattctacaaaggttccag
tctgcttagcttccttcttttccaaagtaaagaggtgaagtcagtccaaa
atgccttcacgttctcatttccagtttataataaacttatttgcacaaaa
tgttgctctttccccttaagcctttttattagttagacatcatttttata
gctgctgatgcaaatagcaaggaatattgaatgaactacattaaacacag
tgaatgtttgatgagatttttctcttgtgctcctctctacagacattaat
gttccactagagttatggagtgatttgtttaaaaaaaaaaaaaggaataa
tatggctgaattagatcctagacattttacataaataatcttcctaattt
attgtttttaaaatataatatgcacatgctttattttatcagttaaaaat
gaaaaaactctaaagcacaaagaaaaaaattatgccaaaaattgtataga
caatttctaaagtaaaattcaagaattcctgtagccatacttcccttgtt
agttttctaccaaacagtctgggagaatttaaatagataccttctaaata
tcgtgagaaagggggatgatagaaacttttatatgaggagtcagaagcac
tggtcaagtcatgtagaagaaaaatgtgatgtagggaactgttggtgtta
ggggcaagatgaaagttgtagggatggagaaagggagggagagagtgt

gaattcaggtgacagcagatgctgtcgaggatatggagaaagagcaacac
tcctccattgctggtggcattgcaagctgatacaaccaaccactctggaa
atcagtttggcagttcctcagttaattggacatattactacctgaggact
cagctatactactcctgggcatatacccagaagatgctccaacttataat
aaggacacatgctccactatgttcatagcagccttatttataatagccag
aatctggaaagaacacagacgtcccttaacagaggaatggatacagaaaa
tgtggtacatttacacaatggagtactactcagctattaaaaacaatgaa
tttatgaaattcttagacaaatggatggatctgaaggatatcatcttgag
tgaggtaacccaatcataaaagaccacacatgatatgtactcactgataa
gtggatatttgcccaaaagctcagaatccttctgagaatggggaacaaat
tacccatagaaggagttacaaagacaaagttcagagcagactgaaggaac
gaccatccagagactgccccacttggggatccatcccataaacaaccatc
aaactcagacactacagcagatgtcaacaagatcctgatgacaggagttt
gatatagctgcctcctgagggcctctgtcagtgcctggcaaatacagaag
tggatactcacaatcatccataggacagagcacaaggtccccaatgaagg
agctagagaaagtacccaaggatctgaaggggtctgaagccccaaaagag
gaacatcaatatgacttaatcagtacccttagagatccagaactaaacca
ccagtcaaagaaaacacatgggtgggacatatggctctagctgtatatgt
agctgaggatgggcctagttgggccatcaatgggaggagaggccctaggt
tctgtgaagtcctatgccccagtatagggaatgccaggactgggaatcag
agtgggtaggttgggggagcaagggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108575223_108576020
seq2: B6Ng01-337N09.b_51_848 (reverse)

seq1  ACACTCTCTCCCTCCCTTTCTCCATCCCTACAACTTTCATCTTGCCCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTCTCCCTCCCTTTCTCCATCCCTACAACTTTCATCTTGCCCCTA  50

seq1  ACACCAACAGTTCCCTACATCACATTTTTCTTCTACATGACTTGACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAACAGTTCCCTACATCACATTTTTCTTCTACATGACTTGACCAGT  100

seq1  GCTTCTGACTCCTCATATAAAAGTTTCTATCATCCCCCTTTCTCACGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGACTCCTCATATAAAAGTTTCTATCATCCCCCTTTCTCACGATA  150

seq1  TTTAGAAGGTATCTATTTAAATTCTCCCAGACTGTTTGGTAGAAAACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGGTATCTATTTAAATTCTCCCAGACTGTTTGGTAGAAAACTAA  200

seq1  CAAGGGAAGTATGGCTACAGGAATTCTTGAATTTTACTTTAGAAATTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAGTATGGCTACAGGAATTCTTGAATTTTACTTTAGAAATTGTC  250

seq1  TATACAATTTTTGGCATAATTTTTTTCTTTGTGCTTTAGAGTTTTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATTTTTGGCATAATTTTTTTCTTTGTGCTTTAGAGTTTTTTCAT  300

seq1  TTTTAACTGATAAAATAAAGCATGTGCATATTATATTTTAAAAACAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGATAAAATAAAGCATGTGCATATTATATTTTAAAAACAATAA  350

seq1  ATTAGGAAGATTATTTATGTAAAATGTCTAGGATCTAATTCAGCCATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAAGATTATTTATGTAAAATGTCTAGGATCTAATTCAGCCATATT  400

seq1  ATTCCTTTTTTTTTTTTTAAACAAATCACTCCATAACTCTAGTGGAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTTTTTTTTTTTAAACAAATCACTCCATAACTCTAGTGGAACAT  450

seq1  TAATGTCTGTAGAGAGGAGCACAAGAGAAAAATCTCATCAAACATTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTGTAGAGAGGAGCACAAGAGAAAAATCTCATCAAACATTCACT  500

seq1  GTGTTTAATGTAGTTCATTCAATATTCCTTGCTATTTGCATCAGCAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAATGTAGTTCATTCAATATTCCTTGCTATTTGCATCAGCAGCTA  550

seq1  TAAAAATGATGTCTAACTAATAAAAAGGCTTAAGGGGAAAGAGCAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGATGTCTAACTAATAAAAAGGCTTAAGGGGAAAGAGCAACATT  600

seq1  TTGTGCAAATAAGTTTATTATAAACTGGAAATGAGAACGTGAAGGCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAAATAAGTTTATTATAAACTGGAAATGAGAACGTGAAGGCATTT  650

seq1  TGGACTGACTTCACCTCTTTACTTTGGAAAAGAAGGAAGCTAAGCAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGACTTCACCTCTTTACTTTGGAAAAGAAGGAAGCTAAGCAGACT  700

seq1  GGAACCTTTGTAGAATTAAATTATTCTATTTCTGAAGGCTATTAGGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTTTGTAGAATTAAATTATTCTATTTCTGAAGGCTATTAGGGAAT  750

seq1  TCTATGCTGACTTTGTACTTGACTCAATAGCCATATTAATGAGAATTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTGACTTTGTACTTGACTCAATAGCCATATTAATGAGAATTC  798


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