BAC Information

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BAC

Clone NameB6Ng01-338O01
Chromosome10 (Build37)
Map Location 35,561,451 - 35,615,976
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667824, LOC100041585
Downstream geneLOC667860, Hs3st5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338O01.bB6Ng01-338O01.g
ACCGA123035GA123036
length1,023528
definitionB6Ng01-338O01.b B6Ng01-338O01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,561,451 - 35,561,996)(35,615,443 - 35,615,976)
sequence
gaattcaagtcatcaggttggcagcaagtgccaggtctttttgtgatatt
ttcttttctttttttttgtttttgtttttgttttttgtttgtttttcttt
cttttctttctttttttcaaatgtatttacctttcccccattgtgccccc
acttcccaatcctggtaaaccctccaaaagttcttcatcccaaacccatt
cctcctcctcttgtgtctgaaatggtgcacccccacaagaactccctctt
ccctgcagcctcaaatcattccaggattaggcacatcttctcccacttga
ggccagaccagtcagtcttctgctatatgccaagagcctcatatatacca
tcccttgtatgctacctagttggtggatcagtctttcggagctcccatgg
gtccagttaattgtcactgctgtttttattatagtgtcaccctctccttc
agttccttcaatccttccactaattcaaccatatggatcccggatttcaa
tccaatggttcagtataagtatctgcatctatctcagccatctgctggta
gggcctctcagaggacatccactccaggctcctgtaagcaaatcatagca
ttagtaatagtgtcaggccttggtgcccctgcccccgcccccccatgaga
tgggtctgaagttttgccattcattgtactgctttctcttaagtctcttc
tctgtttttgatccctgcatttctgcatttcttttggacaggaacaattc
tgggtcagaaattatgactgtgggttagtaaccctgtccctccacttgct
gccctgcctatctactggagttccttttcctcattgctgggcattttggc
taaagtcactcccattgtgtcctgagggtctctcacctcccaggtctctg
gtagtttttagaggtccccccacgccccacccaccaaagctgctgatttt
cattcattctgctgatcctcttggcttgtcttctgtcccccccccccata
cctgattctgtctccctttcccc
actttttagaccaggctggactcgaactcagaaatccgcctgcctctgcc
tcctgagtgctgggattaaaggcgtgtgccaccatgcccagcgcctgttt
gttttgtaatgagagatgcagaaaaggattggatgtggatggaagaggag
gtaggggaaaattggagtagtaagtctggaagctcttagcgtttgtagaa
tctgatcacctgagagcactgatcctgaatgaaagctatggcttctagcc
tccatctgataacctaggcctagaatattccatattctgaggcttactac
tgaataaacttgctctttccatctctctctgaactcttcctggctggttc
aatacagctgttctggctcaaactcttcaagacaactgattcaaattggc
tactcttagcttctgactggattgctctgcttggaaaaaaactgcctctg
aatgccacaaactaaactgaacttctctgaacttctctgaacttctctga
actgaactgaactgaactgaactcagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35561451_35561996
seq2: B6Ng01-338O01.b_45_590

seq1  GAATTCAAGTCATCAGGTTGGCAGCAAGTGCCAGGTCTTTTTGTGATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCATCAGGTTGGCAGCAAGTGCCAGGTCTTTTTGTGATATT  50

seq1  TTCTTTTCTTTTTTTTTGTTTTTGTTTTTGTTTTTTGTTTGTTTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTTTTTTTTGTTTTTGTTTTTGTTTTTTGTTTGTTTTTCTTT  100

seq1  CTTTTCTTTCTTTTTTTCAAATGTATTTACCTTTCCCCCATTGTGCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTCTTTTTTTCAAATGTATTTACCTTTCCCCCATTGTGCCCCC  150

seq1  ACTTCCCAATCCTGGTAAACCCTCCAAAAGTTCTTCATCCCAAACCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAATCCTGGTAAACCCTCCAAAAGTTCTTCATCCCAAACCCATT  200

seq1  CCTCCTCCTCTTGTGTCTGAAATGGTGCACCCCCACAAGAACTCCCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCTTGTGTCTGAAATGGTGCACCCCCACAAGAACTCCCTCTT  250

seq1  CCCTGCAGCCTCAAATCATTCCAGGATTAGGCACATCTTCTCCCACTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGCCTCAAATCATTCCAGGATTAGGCACATCTTCTCCCACTTGA  300

seq1  GGCCAGACCAGTCAGTCTTCTGCTATATGCCAAGAGCCTCATATATACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGACCAGTCAGTCTTCTGCTATATGCCAAGAGCCTCATATATACCA  350

seq1  TCCCTTGTATGCTACCTAGTTGGTGGATCAGTCTTTCGGAGCTCCCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGTATGCTACCTAGTTGGTGGATCAGTCTTTCGGAGCTCCCATGG  400

seq1  GTCCAGTTAATTGTCACTGCTGTTTTTATTATAGTGTCACCCTCTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTTAATTGTCACTGCTGTTTTTATTATAGTGTCACCCTCTCCTTC  450

seq1  AGTTCCTTCAATCCTTCCACTAATTCAACCATATGGATCCCGGATTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTCAATCCTTCCACTAATTCAACCATATGGATCCCGGATTTCAA  500

seq1  TCCAATGGTTCAGTATAAGTATCTGCATCTATCTCAGCCATCTGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGGTTCAGTATAAGTATCTGCATCTATCTCAGCCATCTGCT  546

seq1: chr10_35615443_35615976
seq2: B6Ng01-338O01.g_67_600 (reverse)

seq1  AACTGAGTTCAGTTCAGTTCAGTTCAGTTCAGAGAAGTTCAGAGAAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTTCAGTTCAGTTCAGTTCAGTTCAGAGAAGTTCAGAGAAGTTC  50

seq1  AGAGAAGTTCAGTTTAGTTTGTGGCATTCAGAGGCAGTTTTTTTCCAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTTCAGTTTAGTTTGTGGCATTCAGAGGCAGTTTTTTTCCAAGC  100

seq1  AGAGCAATCCAGTCAGAAGCTAAGAGTAGCCAATTTGAATCAGTTGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAATCCAGTCAGAAGCTAAGAGTAGCCAATTTGAATCAGTTGTCTT  150

seq1  GAAGAGTTTGAGCCAGAACAGCTGTATTGAACCAGCCAGGAAGAGTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTTGAGCCAGAACAGCTGTATTGAACCAGCCAGGAAGAGTTCAG  200

seq1  AGAGAGATGGAAAGAGCAAGTTTATTCAGTAGTAAGCCTCAGAATATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGGAAAGAGCAAGTTTATTCAGTAGTAAGCCTCAGAATATGGA  250

seq1  ATATTCTAGGCCTAGGTTATCAGATGGAGGCTAGAAGCCATAGCTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTAGGCCTAGGTTATCAGATGGAGGCTAGAAGCCATAGCTTTCAT  300

seq1  TCAGGATCAGTGCTCTCAGGTGATCAGATTCTACAAACGCTAAGAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATCAGTGCTCTCAGGTGATCAGATTCTACAAACGCTAAGAGCTTC  350

seq1  CAGACTTACTACTCCAATTTTCCCCTACCTCCTCTTCCATCCACATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTACTACTCCAATTTTCCCCTACCTCCTCTTCCATCCACATCCAA  400

seq1  TCCTTTTCTGCATCTCTCATTACAAAACAAACAGGCGCTGGGCATGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTGCATCTCTCATTACAAAACAAACAGGCGCTGGGCATGGTGG  450

seq1  CACACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTG  500

seq1  AGTTCGAGTCCAGCCTGGTCTAAAAAGTGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  AGTTCGAGTCCAGCCTGGTCTAAAAAGTGAATTC  534