BAC Information

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BAC

Clone NameB6Ng01-339E19
Chromosome10 (Build37)
Map Location 66,281,284 - 66,440,362
singlet/doubletdoublet
Overlap genenone
Upstream gene1700023F02Rik, 4930407I19Rik
Downstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339E19.bB6Ng01-339E19.g
ACCGA123332GA123333
length1,029885
definitionB6Ng01-339E19.b B6Ng01-339E19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,281,284 - 66,282,326)(66,439,478 - 66,440,362)
sequence
gaattcactatcaagtttttaaatatgatattatcactgaaagaacttct
gtacttcatagactgcagtcgtcaaaggcttaggatagggacctgtgtga
gatagttccaagtatgtcttccaaatgcttcctacgcaacatccttcctc
ttcggtttgtattcattctatgactacctcaaacacacacacacaatttt
acaggggagagatactgaaaagagtttacaccaaaatataaaaatataaa
cggtgcagtgcgctgtgataaactactctgataagcaacttaaggaacca
aggggctcacagttcccgaggtttatagtccatcacaacgtggaagacaa
tttgtcaggaaccagccggaacaggaagtgggccaggctacggagcctca
aggcccacccccagcggcccatttcctccagcaagcttcgcctcctaagt
ggtccccatccttttcaaagagaatcaccagcaagggaccaaatgaaaca
caagagactatggggggtatttcacaagcaacctccaacggagggtctgt
ttaaggggcaatacttaatgtaaaggcatgactctctatgatggtgggat
ttcaaaacccggaccgtttagggtaggggaaaaaaaaaaaaaaaaaaaaa
aaactatgcagaagcagagaattctgctcatttcctcacaaatcacagta
cgtaaataattttttattaaatttacaatcccacctatttaagctcctgg
aagaggaacagcgtctaaatataaagccatccattaacctgaattttcat
cgaagactttaattcactcctctccatcctgtgctgagaacagcagctaa
tcgcctcacgttctatttatagaagctgttaccagtttcttgtcttctca
ttcttcatagatcaggagccctggttgcattacagggaacgcttcagaga
gctagatgctttgttgtaagtgatattttatcatcatctttgaatttatt
taaaaaaaatccagctgctcgaacacatg

gaattccaggccagtcaggactacacctcacgcctgttgagatttcatct
ggagatccaccatccccagagtacaaggacactcatcagcaggtcctcat
catcatgtccttctgttcttctgtgtccttctgttcttctgtccttccag
tctgatcagaccactcacctgggcctgatgtagcacagttgttctcagat
gcgagtgctcccttgcttcttccatgtcttagaaacggctcagcagacca
gggcattggacacctccagtgttcctctcctctgtgctttaaggaatatg
tttcatcttaaaaacatttttatctctgtctgttttaagggctaaaaata
atgtcccaactggtgtcagggaacatgcagtaatcaggctgtcatctcca
atattacttcccttgaaaagggaccggaagtccctaggaagatggccaac
tcctagtccagataaagacatgatatgttcagaatatcttgccacctcag
aaataaactataaaggtttacttacaaggaccatggcagaaggatccagt
ggcccgtctgaagcccctcccactggcaaaaggtgagttgtttggaacaa
agatggtaactacaataggtcgaaacgtataaaagaatatgttattattt
tatattaatatgctgtgatattatataaaatatatatttaaatgtagaaa
ttcaatgaatataatatataaatatttatataaatatagaaatacaattc
atattatagatatataaatatgtgaattaaaagataaaatattatataac
atgtaaaatactatacttattataatatgcatttacatatgcatacatta
tatattcttttatatgtgggagtgtgggagtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_66281284_66282326
seq2: B6Ng01-339E19.b_45_1073

seq1  GAATTCACTATCAAGTTTTTAAATATGATATTATCACTGAAAGAACTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATCAAGTTTTTAAATATGATATTATCACTGAAAGAACTTCT  50

seq1  GTACTTCATAGACTGCAGTCGTCAAAGGCTTAGGATAGGGACCTGTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCATAGACTGCAGTCGTCAAAGGCTTAGGATAGGGACCTGTGTGA  100

seq1  GATAGTTCCAAGTATGTCTTCCAAATGCTTCCTACGCAACATCCTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTCCAAGTATGTCTTCCAAATGCTTCCTACGCAACATCCTTCCTC  150

seq1  TTCGGTTTGTATTCATTCTATGACTACCTCAAACACACACACACAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTTTGTATTCATTCTATGACTACCTCAAACACACACACACAATTTT  200

seq1  ACAGGGGAGAGATACTGAAAAGAGTTTACACCAAAATATAAAAATATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAGAGATACTGAAAAGAGTTTACACCAAAATATAAAAATATAAA  250

seq1  CGGTGCAGTGCGCTGTGATAAACTACTCTGATAAGCAACTTAAGGAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCAGTGCGCTGTGATAAACTACTCTGATAAGCAACTTAAGGAACCA  300

seq1  AGGGGCTCACAGTTCCCGAGGTTTATAGTCCATCACAACGTGGAAGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTCACAGTTCCCGAGGTTTATAGTCCATCACAACGTGGAAGACAA  350

seq1  TTTGTCAGGAACCAGCCGGAACAGGAAGTGGGCCAGGCTACGGAGCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAGGAACCAGCCGGAACAGGAAGTGGGCCAGGCTACGGAGCCTCA  400

seq1  AGGCCCACCCCCAGCGGCCCATTTCCTCCAGCAAGCTTCGCCTCCTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCACCCCCAGCGGCCCATTTCCTCCAGCAAGCTTCGCCTCCTAAGT  450

seq1  GGTCCCCATCCTTTTCAAAGAGAATCACCAGCAAGGGACCAAATGAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCATCCTTTTCAAAGAGAATCACCAGCAAGGGACCAAATGAAACA  500

seq1  CAAGAGACTATGGGGGGTATTTCACAAGCAACCTCCAACGGAGGGTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACTATGGGGGGTATTTCACAAGCAACCTCCAACGGAGGGTCTGT  550

seq1  TTAAGGGGCAATACTTAATGTAAAGGCATGACTCTCTATGATGGTGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGGCAATACTTAATGTAAAGGCATGACTCTCTATGATGGTGGGAT  600

seq1  TTCAAAACCCGGACCGTTTAGGGTAGGGGAAAAAAAAAAAAAAAAAAAAA  650
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCAAAACCCGGACCGTTTAGGGTAGGGG-AAAAAAAAAAAAAAAAAAAA  649

seq1  AAAACTATGCAGAAGCAGAGAATTCTGCTCATTTCCTCACAAATCACAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATGCAGAAGCAGAGAATTCTGCTCATTTCCTCACAAATCACAGT  699

seq1  ACGTAAATAATTTTTTATTAAATTTACAATCCCACCTATTTAAGCTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAATAATTTTTTATTAAATTTACAATCCCACCTATTTAAGCTCCTG  749

seq1  GAAGAGGAACAGCGTCTAAATATAAAGCCATCCATTAACCTGAATTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAACAGCGTCTAAATATAAAGCCATCCATTAACCTGAATTTTCA  799

seq1  TCGAAGACTTTAATTCACTCCTCTCCATCCTGTGCTGAGAACAGCAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGACTTTAATTCACTCCTCTCCATCCTGTGCTGAGAACAGCAGCTA  849

seq1  ATCGCCTCACGTTCTATTTATAGAAGCTGTTTACCAGTTTCTTGTCTTCT  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCGCCTCACGTTCTATTTATAGAAGCTG-TTACCAGTTTCTTGTCTTCT  898

seq1  CATTCTTCATAGATCAGGAGCCCTGGTTGCATTACAGGGAACGCTTCAGG  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATTCTTCATAGATCAGGAGCCCTGGTTGCATTACAGGGAACGCTTCA-G  947

seq1  AGAAGCTAGATGCTTTGTGTAAAGTGATATTTTAATCATTCATTCCTTTG  1000
      || |||||||||||||||   |||||||||||| |||| ||||  |||||
seq2  AG-AGCTAGATGCTTTGTTGTAAGTGATATTTT-ATCA-TCAT--CTTTG  992

seq1  GAAATTTATTTTAAAAAAAAATCCCAGCTGCCTCGAACACATG  1043
        |||||||||  ||||||||| ||||||| ||||||||||||
seq2  --AATTTATTT--AAAAAAAAT-CCAGCTG-CTCGAACACATG  1029


seq1: chr10_66439478_66440362
seq2: B6Ng01-339E19.g_67_951 (reverse)

seq1  ACAAACTCCCACACTCCCACATATAAAAGAATATATAATGTATGCATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCCCACACTCCCACATATAAAAGAATATATAATGTATGCATATG  50

seq1  TAAATGCATATTATAATAAGTATAGTATTTTACATGTTATATAATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCATATTATAATAAGTATAGTATTTTACATGTTATATAATATTTT  100

seq1  ATCTTTTAATTCACATATTTATATATCTATAATATGAATTGTATTTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAATTCACATATTTATATATCTATAATATGAATTGTATTTCTAT  150

seq1  ATTTATATAAATATTTATATATTATATTCATTGAATTTCTACATTTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATAAATATTTATATATTATATTCATTGAATTTCTACATTTAAAT  200

seq1  ATATATTTTATATAATATCACAGCATATTAATATAAAATAATAACATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTATATAATATCACAGCATATTAATATAAAATAATAACATATT  250

seq1  CTTTTATACGTTTCGACCTATTGTAGTTACCATCTTTGTTCCAAACAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATACGTTTCGACCTATTGTAGTTACCATCTTTGTTCCAAACAACT  300

seq1  CACCTTTTGCCAGTGGGAGGGGCTTCAGACGGGCCACTGGATCCTTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTGCCAGTGGGAGGGGCTTCAGACGGGCCACTGGATCCTTCTGC  350

seq1  CATGGTCCTTGTAAGTAAACCTTTATAGTTTATTTCTGAGGTGGCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCTTGTAAGTAAACCTTTATAGTTTATTTCTGAGGTGGCAAGAT  400

seq1  ATTCTGAACATATCATGTCTTTATCTGGACTAGGAGTTGGCCATCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAACATATCATGTCTTTATCTGGACTAGGAGTTGGCCATCTTCCT  450

seq1  AGGGACTTCCGGTCCCTTTTCAAGGGAAGTAATATTGGAGATGACAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTTCCGGTCCCTTTTCAAGGGAAGTAATATTGGAGATGACAGCCT  500

seq1  GATTACTGCATGTTCCCTGACACCAGTTGGGACATTATTTTTAGCCCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTGCATGTTCCCTGACACCAGTTGGGACATTATTTTTAGCCCTTA  550

seq1  AAACAGACAGAGATAAAAATGTTTTTAAGATGAAACATATTCCTTAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACAGAGATAAAAATGTTTTTAAGATGAAACATATTCCTTAAAGC  600

seq1  ACAGAGGAGAGGAACACTGGAGGTGTCCAATGCCCTGGTCTGCTGAGCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGAGAGGAACACTGGAGGTGTCCAATGCCCTGGTCTGCTGAGCCG  650

seq1  TTTCTAAGACATGGAAGAAGCAAGGGAGCACTCGCATCTGAGAACAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGACATGGAAGAAGCAAGGGAGCACTCGCATCTGAGAACAACTG  700

seq1  TGCTACATCAGGCCCAGGTGAGTGGTCTGATCAGACTGGAAGGACAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATCAGGCCCAGGTGAGTGGTCTGATCAGACTGGAAGGACAGAAG  750

seq1  AACAGAAGGACACAGAAGAACAGAAGGACATGATGATGAGGACCTGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGGACACAGAAGAACAGAAGGACATGATGATGAGGACCTGCTGA  800

seq1  TGAGTGTCCTTGTACTCTGGGGATGGTGGATCTCCAGATGAAATCTCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCCTTGTACTCTGGGGATGGTGGATCTCCAGATGAAATCTCAAC  850

seq1  AGGCGTGAGGTGTAGTCCTGACTGGCCTGGAATTC  885
      |||||||||||||||||||||||||||||||||||
seq2  AGGCGTGAGGTGTAGTCCTGACTGGCCTGGAATTC  885


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