BAC Information

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BAC

Clone NameB6Ng01-341G14
Chromosome10 (Build37)
Map Location 11,275,452 - 11,276,590
singlet/doubletsinglet
Overlap genenone
Upstream geneRab32, EG382450, Grm1, Shprh, Fbxo30, Epm2a
Downstream geneEG666732, LOC100039343, Utrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341G14.bB6Ng01-341G14.g
ACCGA124800GA124801
length1,1811,140
definitionB6Ng01-341G14.b B6Ng01-341G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctctctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttaatgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatattttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtttggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacatgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggttaggcatggtgattccaccagaggttcttt
tatccttgaaaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctaccaatctatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaggtttttatcata
cagatctttcacttccttagtagagtcacaccaagatatttttatattat
ttgtgactattgagaaggtgttgtttccctaattctttctcagctgttta
tctttgtatagagaaggcatgactgttgagttattttaattcagctactc
accgagctgttatcagtttagggttctctgttgagtttgcgtccttaata
tactctcaatcatctgcaaaaggaattgacttccttcatgatctgatcct
gtgtcaatgccttgctaaccttcagaacatg
gaattcttaagatcctgtgcctggtgttgtgggtatctggcagtagtcag
ccgactctgcaccttagctacccctgtgctgctcggaccgaagggggctt
gtgcccctactcagaccgggttttctgctttcctaactaatgcagtctta
ggtcccgcgtgattggattggacaggataatttcttaccattaattttcc
cacatctctcatagggacattgagttgctttggagcgagaccttttccca
gaatccatttagtttttaaatttgtctgacctcagtagattcataccagt
gattagatatctaatctcaggatttctttttactctacaaaattattaaa
gtattttaccaagaagatttgtgtctgtccttagttaccatattagaaat
ctaaaacaggaaattccaatatatttaattttataggagtttaagaatat
aagtaagtggaacttggtgggatatgcctataattctagaactggaaagt
tgggctgtcgagtcagatattgtctcaaagcaccaaaaagtatataacag
aaagatcaggtaagaatgtgatacaatggcagagtgcttacccagagtgt
gtgaattcagaattagagtccaaacagtggaaaactagtttttaaaaaaa
agtttataacacattggcttaaatggtattttatgaaaataactagagtt
ttccacaccaaaattttaaaaagacaagtgatatttttaattctgcaaac
ctcttgataacttgctgattattgtatctgctccatcaattttgccaaat
gaacatcatccacagatgtctttttttcactttattattttttattaggt
attttctttatttacatttccagtgctatcccaaaagtcccccatacact
cccaccccactcccctacacacccactcccacttcttggccttggcattc
ccctatactgaggcatattaaagttgccactaccaatgggcctcctcttc
cactgaatggccgactaggccatcttctgatacatatgccagctagagac
atggagctctgggggagtactggtagtcataattttgatccactataagg
atggcagatccctttagcctcttggtactttctctagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_11275452_11276590
seq2: B6Ng01-341G14.g_69_1208

seq1  GAATTCTTAAGATCCTGTGCCTGGTGTTGTGGGTATCTGGCAGTAGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGATCCTGTGCCTGGTGTTGTGGGTATCTGGCAGTAGTCAG  50

seq1  CCGACTCTGCACCTTAGCTACCCCTGTGCTGCTCGGACCGAAGGGGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTCTGCACCTTAGCTACCCCTGTGCTGCTCGGACCGAAGGGGGCTT  100

seq1  GTGCCCCTACTCAGACCGGGTTTTCTGCTTTCCTAACTAATGCAGTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCTACTCAGACCGGGTTTTCTGCTTTCCTAACTAATGCAGTCTTA  150

seq1  GGTCCCGCGTGATTGGATTGGACAGGATAATTTCTTACCATTAATTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCGCGTGATTGGATTGGACAGGATAATTTCTTACCATTAATTTTCC  200

seq1  CACATCTCTCATAGGGACATTGAGTTGCTTTGGAGCGAGACCTTTTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTCTCATAGGGACATTGAGTTGCTTTGGAGCGAGACCTTTTCCCA  250

seq1  GAATCCATTTAGTTTTTAAATTTGTCTGACCTCAGTAGATTCATACCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCATTTAGTTTTTAAATTTGTCTGACCTCAGTAGATTCATACCAGT  300

seq1  GATTAGATATCTAATCTCAGGATTTCTTTTTACTCTACAAAATTATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGATATCTAATCTCAGGATTTCTTTTTACTCTACAAAATTATTAAA  350

seq1  GTATTTTACCAAGAAGATTTGTGTCTGTCCTTAGTTACCATATTAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTACCAAGAAGATTTGTGTCTGTCCTTAGTTACCATATTAGAAAT  400

seq1  CTAAAACAGGAAATTCCAATATATTTAATTTTATAGGAGTTTAAGAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACAGGAAATTCCAATATATTTAATTTTATAGGAGTTTAAGAATAT  450

seq1  AAGTAAGTGGAACTTGGTGGGATATGCCTATAATTCTAGAACTGGAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGTGGAACTTGGTGGGATATGCCTATAATTCTAGAACTGGAAAGT  500

seq1  TGGGCTGTCGAGTCAGATATTGTCTCAAAGCACCAAAAAGTATATAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTCGAGTCAGATATTGTCTCAAAGCACCAAAAAGTATATAACAG  550

seq1  AAAGATCAGGTAAGAATGTGATACAATGGCAGAGTGCTTACCCAGAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAGGTAAGAATGTGATACAATGGCAGAGTGCTTACCCAGAGTGT  600

seq1  GTGAATTCAGAATTAGAGTCCAAACAGTGGAAAACTAGTTTTTAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCAGAATTAGAGTCCAAACAGTGGAAAACTAGTTTTTAAAAAAA  650

seq1  AGTTTATAACACATTGGCTTAAATGGTATTTTATGAAAATAACTAGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAACACATTGGCTTAAATGGTATTTTATGAAAATAACTAGAGTT  700

seq1  TTCCACACCAAAATTTTAAAAAGACAAGTGATATTTTTAATTCTGCAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACACCAAAATTTTAAAAAGACAAGTGATATTTTTAATTCTGCAAAC  750

seq1  CTCTTGATAACTTGCTGATTATTGTATCTGCTCCATCAATTTTGCCAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATAACTTGCTGATTATTGTATCTGCTCCATCAATTTTGCCAAAT  800

seq1  GAACATCATCCACAGATGTTCTTTTTTTCACTTTATTATTTTTTATTAGG  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAACATCATCCACAGATG-TCTTTTTTTCACTTTATTATTTTTTATTAGG  849

seq1  TATTTTCTTTATTTACATTTCCAGTGCTATCCCAAAAGTCCCCCATACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTTATTTACATTTCCAGTGCTATCCCAAAAGTCCCCCATACAC  899

seq1  TCCCACCCCACTCCCCTACACACCCACTCCCACTTCTTGGCCTTGGCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCCACTCCCCTACACACCCACTCCCACTTCTTGGCCTTGGCATT  949

seq1  CCCCTATACTGAGGCATA-TAAAGTTTGCACTACCAATGGGCCTCTCTTT  999
      |||||||||||||||||| |||||||  |||||||||||||||||   ||
seq2  CCCCTATACTGAGGCATATTAAAGTTGCCACTACCAATGGGCCTCCTCTT  999

seq1  CCACTG-ATGGCCGACTAGGCCATCTTCTGATACATATG-CAGCTAGAGA  1047
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  CCACTGAATGGCCGACTAGGCCATCTTCTGATACATATGCCAGCTAGAGA  1049

seq1  CAT-GAGCTCT-GGGGAGTACTGGGTAGTTCATATTTTTGATCCACCTAT  1095
      ||| ||||||| |||||||||| ||||| ||||| |||||||||| ||||
seq2  CATGGAGCTCTGGGGGAGTACT-GGTAG-TCATAATTTTGATCCA-CTAT  1096

seq1  -AGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTC  1139
       ||| | |||||||||||||||  ||| |||||||||||||||||
seq2  AAGGATGGCAGATCCCTTTAGCCTCTT-GGTACTTTCTCTAGCTC  1140