BAC Information

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BAC

Clone NameB6Ng01-341P01
Chromosome10 (Build37)
Map Location 48,024,557 - 48,025,695
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668252, LOC100042387, LOC100041663, LOC100042398
Downstream geneLOC546562, LOC100041689, Grik2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341P01.bB6Ng01-341P01.g
ACCGA125180GA125181
length1,128150
definitionB6Ng01-341P01.b B6Ng01-341P01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatgtgaacatagacccatgtaccagataaagactactattgt
agtaattttccttaattttattttgatggaaacaatccattatgaaaata
aaagtattaagctttctcctttagtatatgaacttcccagagtacttccc
ttttatactgtttttgaaagatatacgtattctaaacttttagttaattt
ttaagagataaaatagtactactaactctaatccccaagtcataatttgt
attttaaaactcatttattcacagctatgttgaatataacaatttgcata
tgtatttgattataaatttaatattaatataatacaaattatgcaaatat
atatgcaatttgaatatactttgtaagttaatactcatttactcatacta
tttagaatataacaagtaaatgtaagaaattatagaaaacaaaaagcata
ttggcaaaatgtaattgatgtgttttaataaatagttatgaatttgaaaa
tctgcagtggaaactatatgaacatactaagctaaattacttttaatgca
ttttgtattttattgtttagatcataattattttgatggtagagtgacaa
aaagcagaactaaactgtatgattttataaaaaatatttcatgtagaatg
gcaactattaatcagaaaaattaagtagtaaaacttaaaagaagtaatgt
tataatttcatctttttctcactttctaatccgaagctttagttgttgtt
ctttgacaaatctatgaagatattggtctcttgctctcttgctcttactc
ctttactccccttactctcctctctcttcctctctccctcttaatctcta
tcctttcctctctctctcttcccccttctctcttcttggccatggtcagt
gtctctctctctctctctttccaccttctctctgtcccctgcctttttat
aataaagctctaaatctaaatccctagacaataaataaataaataaaata
aataaaataaagaggattttggtatgaagtttctgcatttacctagtact
tcacgctagctttattttattaaccatgaaaatgtgtagagtcacattgg
agagagtacttagcatagggaattgcaa

acatggaaagacccatggctccaacaacatatgttgcagagcatggcctt
gtcggacaccagtgggaggagaggttcttggtcctgtgaaggctcaatga
tccagtgtaggagaatgtcagggcaggaggtgggagtgggtgagtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_48024557_48025695
seq2: B6Ng01-341P01.b_45_1172 (reverse)

seq1  TTGCAA-TCCCTATTGCTTAGTACTCTCTCAATTGTGACTCTACAACATT  49
      |||||| |||||| |||| ||||||||||| | ||||||||||| |||||
seq2  TTGCAATTCCCTA-TGCTAAGTACTCTCTCCAATGTGACTCTAC-ACATT  48

seq1  TTCATGGTTAATAAAATAAAGCTAGCGTGAAGTTACTAGGTAAATGCAGA  99
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTCATGGTTAATAAAATAAAGCTAGCGTGAAG-TACTAGGTAAATGCAGA  97

seq1  AACTTCATTACCAATATCCTCTTTTATTTTATTTTATTTTTTATTTTATT  149
      ||||||| |||||| |||||| |||||||||||   | ||||||||   |
seq2  AACTTCA-TACCAAAATCCTC-TTTATTTTATT---TATTTTATTT--AT  140

seq1  TTATTTTATTTGTCTATGGATTTAGATTTAGAGCTTTATTATAAAAAGGC  199
      ||||||   ||||||| |||||||||||||||||||||||||||||||||
seq2  TTATTT--ATTGTCTAGGGATTTAGATTTAGAGCTTTATTATAAAAAGGC  188

seq1  AGGGGACAGAGAGAAGGTGGAAAGAGAGAGAGAGAGAGACACTGACCATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACAGAGAGAAGGTGGAAAGAGAGAGAGAGAGAGACACTGACCATG  238

seq1  GCCAAGAAGAGAGAAGGGGGAAGAGAGAGAGAGGAAAGGATAGAGATTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAAGAGAGAAGGGGGAAGAGAGAGAGAGGAAAGGATAGAGATTAA  288

seq1  GAGGGAGAGAGGAAGAGAGAGGAGAGTAAGGGGAGTAAAGGAGTAAGAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGAGGAAGAGAGAGGAGAGTAAGGGGAGTAAAGGAGTAAGAGC  338

seq1  AAGAGAGCAAGAGACCAATATCTTCATAGATTTGTCAAAGAACAACAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCAAGAGACCAATATCTTCATAGATTTGTCAAAGAACAACAACT  388

seq1  AAAGCTTCGGATTAGAAAGTGAGAAAAAGATGAAATTATAACATTACTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCGGATTAGAAAGTGAGAAAAAGATGAAATTATAACATTACTTC  438

seq1  TTTTAAGTTTTACTACTTAATTTTTCTGATTAATAGTTGCCATTCTACAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTTTACTACTTAATTTTTCTGATTAATAGTTGCCATTCTACAT  488

seq1  GAAATATTTTTTATAAAATCATACAGTTTAGTTCTGCTTTTTGTCACTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTTTTTATAAAATCATACAGTTTAGTTCTGCTTTTTGTCACTCT  538

seq1  ACCATCAAAATAATTATGATCTAAACAATAAAATACAAAATGCATTAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAAAATAATTATGATCTAAACAATAAAATACAAAATGCATTAAAA  588

seq1  GTAATTTAGCTTAGTATGTTCATATAGTTTCCACTGCAGATTTTCAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTAGCTTAGTATGTTCATATAGTTTCCACTGCAGATTTTCAAATT  638

seq1  CATAACTATTTATTAAAACACATCAATTACATTTTGCCAATATGCTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTATTTATTAAAACACATCAATTACATTTTGCCAATATGCTTTTT  688

seq1  GTTTTCTATAATTTCTTACATTTACTTGTTATATTCTAAATAGTATGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTATAATTTCTTACATTTACTTGTTATATTCTAAATAGTATGAGT  738

seq1  AAATGAGTATTAACTTACAAAGTATATTCAAATTGCATATATATTTGCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTATTAACTTACAAAGTATATTCAAATTGCATATATATTTGCAT  788

seq1  AATTTGTATTATATTAATATTAAATTTATAATCAAATACATATGCAAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATTATATTAATATTAAATTTATAATCAAATACATATGCAAATT  838

seq1  GTTATATTCAACATAGCTGTGAATAAATGAGTTTTAAAATACAAATTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATTCAACATAGCTGTGAATAAATGAGTTTTAAAATACAAATTATG  888

seq1  ACTTGGGGATTAGAGTTAGTAGTACTATTTTATCTCTTAAAAATTAACTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGGATTAGAGTTAGTAGTACTATTTTATCTCTTAAAAATTAACTA  938

seq1  AAAGTTTAGAATACGTATATCTTTCAAAAACAGTATAAAAGGGAAGTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTAGAATACGTATATCTTTCAAAAACAGTATAAAAGGGAAGTACT  988

seq1  CTGGGAAGTTCATATACTAAAGGAGAAAGCTTAATACTTTTATTTTCATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGTTCATATACTAAAGGAGAAAGCTTAATACTTTTATTTTCATA  1038

seq1  ATGGATTGTTTCCATCAAAATAAAATTAAGGAAAATTACTACAATAGTAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTGTTTCCATCAAAATAAAATTAAGGAAAATTACTACAATAGTAG  1088

seq1  TCTTTATCTGGTACATGGGTCTATGTTCACATGAGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCTGGTACATGGGTCTATGTTCACATGAGAATTC  1128


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