BAC Information

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BAC

Clone NameB6Ng01-341P02
Chromosome10 (Build37)
Map Location 73,723,864 - 73,724,754
singlet/doubletsinglet
Overlap genePcdh15
Upstream geneLOC432471, LOC100039981, LOC623191
Downstream geneEG630453, EG623346, Gnaz, LOC100040057, Rab36, Bcr, Specc1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341P02.bB6Ng01-341P02.g
ACCGA125182GA125183
length9131,188
definitionB6Ng01-341P02.b B6Ng01-341P02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagttccaggaaaactggcacccactcttatgtatcagtttgtg
ttctattcaacatttttatatagagatttaactgcaattaaattctaaaa
ctagcaatgttttcaggactggagaactggtccattggttaaaagtcatc
aactgatcttagagggactggtgtttggttgccagcaccacaccaggcac
ctcacaatcacctctacctgcactttcaaagaactcaccacccaccacat
acacaacatacacacacacacacacacatacaaacacacacacacaaaac
taagacaaatcttttaaaactatatgtttttcattcaagcatttgaagta
taaattacatgcaactatgtaacttcacaaacattaacaaaattatctag
atttggtcttgtttcattttttgaggcaaagtaaaatgtagcccaggatg
acattgaactcttaatcttcctgccttcacctccaagttctggggttaca
aacaaatgcaccgcactgtttttgtttgtttgtttgtttgtttgtttttt
gtttttttcattttttattaggtatttagctcatttacatttccaatgct
ataccaaaagtcccccatacccacccacccccactcccctacccacccat
tccccctttttggccctggcgtttcctctgtactgggggcatataaagtt
tgcaagtccaatgggcctctctttgcatttgatggctgactagggccatt
ctttttgatacatatgcagctaggagacaaagagctcccggggtaactgg
tttagttcataattgttgttccaccctattagggttgacaattccctttt
agtttccttggggtgctttctctaggtccctccattgggggaaccctggt
ggtccattccata

gaattccacataaaaccagagacactgtaattcatagaggagaaattggg
gaaaacccttaaagatatgggcacaggggaaaaaaatcctaaacagaaca
gcaatggcttgtgctgtaagatcaattgacaagtgggacctcataaaatt
gcaaagtttctgtagggcaaaagatactgtcaataagacaaaaatgtttt
accaatcctaaatctgagaggggactaatatccagtatatacaaagagct
gaagaagctgaactccacaaattcaaataaccctattaaaaatggggtac
agagctaaacaaagaattctcaactgaggaataccaaagggctgagaagc
acttgaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaa
acaaccctgagattccacctcacaccagtcagaatggctaggatcaaaaa
ttcaggtgccagcagattgtagtgaggctgtggaaaaagaggaatactcc
tccattgctggtgggattgcaagctggtacaaccactctggaaatcagtc
tggcagttcctcagaaaactggacatagtactacagctagattcagcaat
acctctcctgggcacatacccagaagatgttccaactggtaataagaata
catgctccactatgttcatagcagccctatttataatagccagaagctgg
aaagaacccagatgtccctcaacagaggaatggatacagaaaatgtggta
cattttcacaatggagtactactcagctattaaaaacaatgaatttatga
aattcttgggcaaatggatctatctgtaggatatcatgctgaattcggta
acccaatcacaaaagaagtcacttcatatgcactcactgataagtgatta
tttaacccagaaacctagaatacccaagatacaacttccaaaacacaaga
aaatcaagaaggaagacgaatgcatggatatttcattcctccctagaata
aggaataaaattattcatggaagagttgtagagacaaagttgagcctaag
atggaaaggatggatcatctagagactggcctcttcccgggcgttcattc
aatcagccaccaacttcagtcactatgccatatgccagccagaatttgcc
ttgagggaacctggatatataggcctgtttcttctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_73723864_73724754
seq2: B6Ng01-341P02.b_51_963

seq1  GAATTCTAGTTCCAGGAAAACTGGCACCCACTCTTATGTATCAGTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTCCAGGAAAACTGGCACCCACTCTTATGTATCAGTTTGTG  50

seq1  TTCTATTCAACATTTTTATATAGAGATTTAACTGCAATTAAATTCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCAACATTTTTATATAGAGATTTAACTGCAATTAAATTCTAAAA  100

seq1  CTAGCAATGTTTTCAGGACTGGAGAACTGGTCCATTGGTTAAAAGTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAATGTTTTCAGGACTGGAGAACTGGTCCATTGGTTAAAAGTCATC  150

seq1  AACTGATCTTAGAGGGACTGGTGTTTGGTTGCCAGCACCACACCAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCTTAGAGGGACTGGTGTTTGGTTGCCAGCACCACACCAGGCAC  200

seq1  CTCACAATCACCTCTACCTGCACTTTCAAAGAACTCACCACCCACCACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAATCACCTCTACCTGCACTTTCAAAGAACTCACCACCCACCACAT  250

seq1  ACACAACATACACACACACACACACACATACAAACACACACACACAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACATACACACACACACACACACATACAAACACACACACACAAAAC  300

seq1  TAAGACAAATCTTTTAAAACTATATGTTTTTCATTCAAGCATTTGAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAATCTTTTAAAACTATATGTTTTTCATTCAAGCATTTGAAGTA  350

seq1  TAAATTACATGCAACTATGTAACTTCACAAACATTAACAAAATTATCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACATGCAACTATGTAACTTCACAAACATTAACAAAATTATCTAG  400

seq1  ATTTGGTCTTGTTTCATTTTTTGAGGCAAAGTAAAATGTAGCCCAGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCTTGTTTCATTTTTTGAGGCAAAGTAAAATGTAGCCCAGGATG  450

seq1  ACATTGAACTCTTAATCTTCCTGCCTTCACCTCCAAGTTCTGGGGTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAACTCTTAATCTTCCTGCCTTCACCTCCAAGTTCTGGGGTTACA  500

seq1  AACAAATGCACCGCACTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGCACCGCACTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTT  550

seq1  GTTTTTTTCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCT  600

seq1  ATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCAT  650

seq1  TCCCCCTTTTTGGCCCTGGCG-TTCCTCTGTACT-GGGGCATATAAAGTT  698
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  TCCCCCTTTTTGGCCCTGGCGTTTCCTCTGTACTGGGGGCATATAAAGTT  700

seq1  TGCAAGTCCAATGGGCCTCTCTTTGCA-TTGATGGCTGACTA-GGCCAT-  745
      ||||||||||||||||||||||||||| |||||||||||||| |||||| 
seq2  TGCAAGTCCAATGGGCCTCTCTTTGCATTTGATGGCTGACTAGGGCCATT  750

seq1  -CTTTTGATACATATGCAGCTA-GAGAC-AAGAGCT-CCGGGGT-ACTGG  790
        |||||||||||||||||||| ||||| ||||||| ||||||| |||||
seq2  CTTTTTGATACATATGCAGCTAGGAGACAAAGAGCTCCCGGGGTAACTGG  800

seq1  -TTAGTTCAT-ATTGTTGTTCCA-CCTA-TAGGGTTG-CAGTTCCC-TTT  834
       ||||||||| |||||||||||| |||| |||||||| || ||||| |||
seq2  TTTAGTTCATAATTGTTGTTCCACCCTATTAGGGTTGACAATTCCCTTTT  850

seq1  AG-TTCCTT-GGGTGCTTTCTCTA-GTTCCTCCATTGGGG--ACCCT-GT  878
      || |||||| |||||||||||||| || ||||||||||||  ||||| ||
seq2  AGTTTCCTTGGGGTGCTTTCTCTAGGTCCCTCCATTGGGGGAACCCTGGT  900

seq1  GGTCCATTCAATA  891
      ||||||||| |||
seq2  GGTCCATTCCATA  913


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