BAC Information

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BAC

Clone NameB6Ng01-342I08
Chromosome10 (Build37)
Map Location 97,107,018 - 97,108,211
singlet/doubletsinglet
Overlap geneEpyc
Upstream geneLOC628256, 4930556N09Rik, EG667407, Dcn, Lum, Kera
Downstream gene4921510H08Rik, EG667438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342I08.bB6Ng01-342I08.g
ACCGA125580GA125581
length1,1711,176
definitionB6Ng01-342I08.b B6Ng01-342I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtacccaaggagctaaagggatcttcaaccc
ttataggtggaacaacattatgactgaccagtacccctgagctctgactc
tagctgcatatgtattcaaaagatggcctagtcgcatcactgcaagagag
ccattgacacgcgacctttgggtggccccggatacagggacgccaaggcc
caagggttattgattgattac
gaattctccatccttcagctgtaagagtgaatgactgccagagaaaaact
ttgccaggagttatagcttaataataaagcaaaggaaggaaaatcttcat
aaagaactggagacacaggtgtttacagattggagaacatgtaagagtct
aggggaaaacttcctaagattgtgggtgtaggcgacacagtgtgtgcggg
taatggtacagctagggttttggacccctactagtgtgtagaaagcctgc
aaggcattggggggattcatggtaaataggctattatagggagaaaactt
aacactgtaagcaacattttcatgtattaacatcagtgggtggaatatat
gtgtctcgcctcagatcagtttgatgtgatcgtttagaatccaaagggaa
gctaacaaagattattgtcagagttactgatgattttggctcattattgc
tacagaatagaaagaatcgttagaaaaacacttttttttacactaatgct
gttaaagcaatcactctagtttttagttctgtaaagagttctagccaaaa
gtctttgtaaaatgttttggaagatgagaataagctctataaaaccccag
ttatgagctaatgcaacttgtcataatgactgattccctggggtttctgg
taaacaagcttagcctctattaagaaaattatcaggagacaaaaaagata
tttactatgaataaaggaggctagaactgataatttatccttcctcgctg
ttcagtgttgattatagcctcaggagcttgctacaaacttgagaaccaac
agttcaaaatagattttgaaaatttcaagaagaccaagttaaagcaatgg
gaatgactgaagaaattatccattttaataaaaaggaaatagaagtgtta
ttaagttgaaaaagagaagtctgaggaattataatttttgccttaatttt
atattaagacaggtagctctatctgtctgtctgtttgtctactagacaga
gctcatatataccacctagctcaaacccatgatcagagattgactgatct
gactctcctctgactacccagttgctgagaattgtagacatgatcattgg
agctctgattgcaaagcctggccatagacttatgccaatgttagatagcc
ttaacaacattcgcaggtcttggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97107018_97108211
seq2: B6Ng01-342I08.g_67_1242

seq1  GAATTCTCCATCCTTCAGCTGTAAGAGTGAATGACTGCCAGAGAAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCCTTCAGCTGTAAGAGTGAATGACTGCCAGAGAAAAACT  50

seq1  TTGCCAGGAGTTATAGCTTAATAATAAAGCAAAGGAAGGAAAATCTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGAGTTATAGCTTAATAATAAAGCAAAGGAAGGAAAATCTTCAT  100

seq1  AAAGAACTGGAGACACAGGTGTTTACAGATTGGAGAACATGTAAGAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTGGAGACACAGGTGTTTACAGATTGGAGAACATGTAAGAGTCT  150

seq1  AGGGGAAAACTTCCTAAGATTGTGGGTGTAGGCGACACAGTGTGTGCGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAACTTCCTAAGATTGTGGGTGTAGGCGACACAGTGTGTGCGGG  200

seq1  TAATGGTACAGCTAGGGTTTTGGACCCCTACTAGTGTGTAGAAAGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTACAGCTAGGGTTTTGGACCCCTACTAGTGTGTAGAAAGCCTGC  250

seq1  AAGGCATTGGGGGGATTCATGGTAAATAGGCTATTATAGGGAGAAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTGGGGGGATTCATGGTAAATAGGCTATTATAGGGAGAAAACTT  300

seq1  AACACTGTAAGCAACATTTTCATGTATTAACATCAGTGGGTGGAATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTAAGCAACATTTTCATGTATTAACATCAGTGGGTGGAATATAT  350

seq1  GTGTCTCGCCTCAGATCAGTTTGATGTGATCGTTTAGAATCCAAAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCGCCTCAGATCAGTTTGATGTGATCGTTTAGAATCCAAAGGGAA  400

seq1  GCTAACAAAGATTATTGTCAGAGTTACTGATGATTTTGGCTCATTATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAAAGATTATTGTCAGAGTTACTGATGATTTTGGCTCATTATTGC  450

seq1  TACAGAATAGAAAGAATCGTTAGAAAAACACTTTTTTTTACACTAATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATAGAAAGAATCGTTAGAAAAACACTTTTTTTTACACTAATGCT  500

seq1  GTTAAAGCAATCACTCTAGTTTTTAGTTCTGTAAAGAGTTCTAGCCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGCAATCACTCTAGTTTTTAGTTCTGTAAAGAGTTCTAGCCAAAA  550

seq1  GTCTTTGTAAAATGTTTTGGAAGATGAGAATAAGCTCTATAAAACCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTAAAATGTTTTGGAAGATGAGAATAAGCTCTATAAAACCCCAG  600

seq1  TTATGAGCTAATGCAACTTGTCATAATGACTGATTCCCTGGGGTTTCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCTAATGCAACTTGTCATAATGACTGATTCCCTGGGGTTTCTGG  650

seq1  TAAACAAGCTTAGCCTCTATTAAGAAAATTATCAGGAGACAAAAAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGCTTAGCCTCTATTAAGAAAATTATCAGGAGACAAAAAAGATA  700

seq1  TTTACTATGAATAAAGGAGGCTAGAACTGATAATTTATCCTTCCTCGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATGAATAAAGGAGGCTAGAACTGATAATTTATCCTTCCTCGCTG  750

seq1  TTCAGTGTTGATTATAGCCTCAGGAGCTTGCTACAAACTTGAGAACCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTTGATTATAGCCTCAGGAGCTTGCTACAAACTTGAGAACCAAC  800

seq1  AGTTCAAAATAGATTTTGAAAATTTCAAGAAGACCAAGTTAAAGCAATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAATAGATTTTGAAAATTTCAAGAAGACCAAGTTAAAGCAATGG  850

seq1  GAATGACTGAAGAAATTATCCATTTTAATAAAAA-GAAATAGAAGTGTTA  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAATGACTGAAGAAATTATCCATTTTAATAAAAAGGAAATAGAAGTGTTA  900

seq1  TTAAGTTGAAAAAAGAGAAGTCTGAGGAATTATAATTTTTGCCTTAATTT  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTG-AAAAAGAGAAGTCTGAGGAATTATAATTTTTGCCTTAATTT  949

seq1  TATATTAAGACAGGTAGCTCTATCTGTCTGTCTGTTTGTCTACTTAGACA  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATATTAAGACAGGTAGCTCTATCTGTCTGTCTGTTTGTCTAC-TAGACA  998

seq1  GAAGCTCATATATACCACCTAGCTTCAAACCCATGAATCAGAAGATTGAC  1049
      | ||||||||||||||||||||| ||||||||||| ||||| ||||||||
seq2  G-AGCTCATATATACCACCTAGC-TCAAACCCATG-ATCAG-AGATTGAC  1044

seq1  TGATTCTGACTCTCCTTCCTGACCACCCAGTTGCTGAG-ATTGTAGACAT  1098
      ||| ||||||||||||  ||||| |||||||||||||| |||||||||||
seq2  TGA-TCTGACTCTCCT--CTGACTACCCAGTTGCTGAGAATTGTAGACAT  1091

seq1  GTATCAATGGAGCTCTGATTGGCAGAGGCTGGCATTTAAGAGTTATGCAT  1148
      | |||| ||||||||||||| ||| || |||||  |  ||| ||||||  
seq2  G-ATCATTGGAGCTCTGATT-GCAAAGCCTGGCCAT--AGACTTATGCCA  1137

seq1  ATGTTAGATAAGCCCTCTACCAACATTCCCATCAAGGTCTTGGCTT  1194
      ||||||||| ||||   || |||||||| |    ||||||||||||
seq2  ATGTTAGAT-AGCC--TTAACAACATTCGC----AGGTCTTGGCTT  1176