BAC Information

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BAC

Clone NameB6Ng01-342N23
Chromosome10 (Build37)4 (Build37)
Map Location 97,654,030 - 97,654,302126,923,677 - 126,924,827
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1, Wdr51b, Galnt4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342N23.bB6Ng01-342N23.g
ACCGA125817GA125818
length5901,137
definitionB6Ng01-342N23.b B6Ng01-342N23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(97,654,030 - 97,654,302)(126,923,677 - 126,924,827)
sequence
acatcctatcgggagagagacagccacagaatcatacagatttaaaatgg
caactagataagagaagggtacagaatgccctgagagcaagcagcaggga
gatctgacctagtcagggaggccagagaaagcgtccctgaagaaatgaca
accgagctgagatctgaaggggaaaccgaagtcagcaaggaagagatgga
gtgggggaaaagctctctggacagggagtaggctccatgatgtgagggat
catggaactgaaaaagggctggcttggctgaagcagagagagcgagcaag
gggaggggggagagtgtcatttgaatatatatagcaacctgtatgaataa
gtttaaatggtcactgggagcagatatatatatatataatgtagacttct
ctatgacttcctttcagatgacattctgaagctaacaaactgtgacagga
tgcatttcagttgattgtttagtgcgaggataacagggaggttgattgca
aagtggccattgggaattttcttgtgtgatagatatgctgcgtgccttga
tttcgattgtgatttatccttcattatacattttgtcaaa
gaattcttttcagtgcaaaaacgagaactagacatggaggtgcccctcct
aatggcaacgataaaccccaaccattcccagttgaggccaagcccctccc
cgggagcctgagaccaaggttcattccccagggctcctccctgcagggct
cccaggtaagatcagaagcctgtccaggcacggagagagcccactgagca
gacgcagtcttcctcattgctggcccctactgctgccgctctgcagccat
acaggaccagccagtacacgagtggctgtgggtgctcagggggccggagt
gagcagcaaagcaaatcagatgtgtgttctgaagctgggtcgacatggcg
gcaggacatggcatatccctgtgcaccacagggacctgggccctccatta
gttcttctctggacggtttctgttcaggactgctttaggggcaaattcta
gcttgtccttaaggctcaccacctgagtgtggtccttgcctagcatctca
tccagctttcggtcctctcggcgctccaggatgctcttctcctcctccac
aggctgaggagtctttcccctgatgaaccattccaggtggtagcccacag
ccccgaccacaaaggccacagggaaggtgacatagggggcataggttcgc
accacggtccaaagcacaggccacatgacatctgcagaagaatacagaga
gcgttagggagacatgggtgcctcctcttctagcacgtgcggacagcaca
taggtgctctacttaccaggcagcctggcaactaataactgggcagccac
cctgcagagcagcaagcagccactgtgctctgtgcaacagttgggtcccc
gaaatactctaagaagtttgcaaaagattcgactgttgggacgggggtaa
aaacctctacgaactagtgctactgtgtgcatatgcccctcacaagaact
ccaagcctattaatggctctcaacctgctatgacctcagtcctctcttca
gaatatctgtcaacatcttaggagagaaagaagtcttttctctgctcatt
aaaacttcacacaggcctcactctgaatcttgctcctggatggataagta
gtctctctggatgtccaaggtccttattttaactatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97654030_97654302
seq2: B6Ng01-342N23.b_367_642

seq1  TGTCATTTGAATATATATAGCAACCTGTATGAATAAGTTTAAATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGAATATATATAGCAACCTGTATGAATAAGTTTAAATGGTCAC  50

seq1  TGGGAGCAGATATATATATATATAATGTAGACTTCTCTATGACTTCC-TT  99
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGGAGCAGATATATATATATATAATGTAGACTTCTCTATGACTTCCTTT  100

seq1  CAGATGACATTCTGAAGCTAACAAACTGTGACAGGATGCATTTCAG-TGA  148
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGATGACATTCTGAAGCTAACAAACTGTGACAGGATGCATTTCAGTTGA  150

seq1  TTGTTTAGTGCGAGGATAACAGGGAGGTTGATTGCAAAGTGGCCATTGGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAGTGCGAGGATAACAGGGAGGTTGATTGCAAAGTGGCCATTGGG  200

seq1  AATTTTCTTGTGTGATAGATATGCTGCGTGCCTTGATTTCGATTGTGATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTGTGTGATAGATATGCTGCGTGCCTTGATTTCGATTGTGATT  250

seq1  TATCCTTCATTATACA-TTTGTCAAA  273
      |||||||||||||||| |||||||||
seq2  TATCCTTCATTATACATTTTGTCAAA  276

seq1: chr4_126923677_126924827
seq2: B6Ng01-342N23.g_68_1204 (reverse)

seq1  CATAGTT-AAATAAGGCCCTTGTGCTTTCCCCCAGGAGAAGGAACTACTT  49
      ||||||| |||||||| |||||  | |    ||||    ||  |||||||
seq2  CATAGTTAAAATAAGGACCTTGGACAT----CCAG----AGAGACTACTT  42

seq1  AT-CATCAGGGAGCCAGAATTCAGAGTGAGG-CTGTGTGAAGTTTTATAG  97
      || ||||  ||||| || ||||||||||||| |||||||||||||||  |
seq2  ATCCATCCAGGAGCAAG-ATTCAGAGTGAGGCCTGTGTGAAGTTTTAATG  91

seq1  AGCAGAGAAAAGACTTCTTTTCTCTTCCTAAGATGTTGACAGATATCTGG  147
      ||||||||||||||||| |||||| |||||||||||||||||||||   |
seq2  AGCAGAGAAAAGACTTC-TTTCTC-TCCTAAGATGTTGACAGATATTCTG  139

seq1  AAGAGAGGACCTGAGGTCATACCAGGTTGGAAGAGCCATTAATTAGGCTT  197
      ||||||||| ||||||||||| |||||||  ||||||||||| |||||||
seq2  AAGAGAGGA-CTGAGGTCATAGCAGGTTG--AGAGCCATTAA-TAGGCTT  185

seq1  GGAGTTTCCTTGTGAGGGGCATATGCACACAGTAGCACTAGTTCGTAGAG  247
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTT--CTTGTGAGGGGCATATGCACACAGTAGCACTAGTTCGTAGAG  233

seq1  GTTTTTACCCCCGTCCCCAACAGTCGAATCTTTTGC-AACTTCTTAGAGT  296
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  GTTTTTACCCCCGT-CCCAACAGTCGAATCTTTTGCAAACTTCTTAGAGT  282

seq1  ATTTCGGGGACCCAACTGTTGCACAGAGCACAGTGGCTGCTTGCTGCTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGGGGACCCAACTGTTGCACAGAGCACAGTGGCTGCTTGCTGCTCT  332

seq1  GCAGGGTGGCTGCCCAGTTATTAGTTGCCAGGCTGCCTGGTAAGTAGAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTGGCTGCCCAGTTATTAGTTGCCAGGCTGCCTGGTAAGTAGAGC  382

seq1  ACCTATGTGCTGTCCGCACGTGCTAGAAGAGGAGGCACCCATGTCTCCCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGTGCTGTCCGCACGTGCTAGAAGAGGAGGCACCCATGTCTCCCT  432

seq1  AACGCTCTCTGTATTCTTCTGCAGATGTCATGTGGCCTGTGCTTTGGACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTCTCTGTATTCTTCTGCAGATGTCATGTGGCCTGTGCTTTGGACC  482

seq1  GTGGTGCGAACCTATGCCCCCTATGTCACCTTCCCTGTGGCCTTTGTGGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCGAACCTATGCCCCCTATGTCACCTTCCCTGTGGCCTTTGTGGT  532

seq1  CGGGGCTGTGGGCTACCACCTGGAATGGTTCATCAGGGGAAAGACTCCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCTGTGGGCTACCACCTGGAATGGTTCATCAGGGGAAAGACTCCTC  582

seq1  AGCCTGTGGAGGAGGAGAAGAGCATCCTGGAGCGCCGAGAGGACCGAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGGAGGAGGAGAAGAGCATCCTGGAGCGCCGAGAGGACCGAAAG  632

seq1  CTGGATGAGATGCTAGGCAAGGACCACACTCAGGTGGTGAGCCTTAAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAGATGCTAGGCAAGGACCACACTCAGGTGGTGAGCCTTAAGGA  682

seq1  CAAGCTAGAATTTGCCCCTAAAGCAGTCCTGAACAGAAACCGTCCAGAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGAATTTGCCCCTAAAGCAGTCCTGAACAGAAACCGTCCAGAGA  732

seq1  AGAACTAATGGAGGGCCCAGGTCCCTGTGGTGCACAGGGATATGCCATGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAATGGAGGGCCCAGGTCCCTGTGGTGCACAGGGATATGCCATGT  782

seq1  CCTGCCGCCATGTCGACCCAGCTTCAGAACACACATCTGATTTGCTTTGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGCCATGTCGACCCAGCTTCAGAACACACATCTGATTTGCTTTGC  832

seq1  TGCTCACTCCGGCCCCCTGAGCACCCACAGCCACTCGTGTACTGGCTGGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACTCCGGCCCCCTGAGCACCCACAGCCACTCGTGTACTGGCTGGT  882

seq1  CCTGTATGGCTGCAGAGCGGCAGCAGTAGGGGCCAGCAATGAGGAAGACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGGCTGCAGAGCGGCAGCAGTAGGGGCCAGCAATGAGGAAGACT  932

seq1  GCGTCTGCTCAGTGGGCTCTCTCCGTGCCTGGACAGGCTTCTGATCTTAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCTGCTCAGTGGGCTCTCTCCGTGCCTGGACAGGCTTCTGATCTTAC  982

seq1  CTGGGAGCCCTGCAGGGAGGAGCCCTGGGGAATGAACCTTGGTCTCAGGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGCCCTGCAGGGAGGAGCCCTGGGGAATGAACCTTGGTCTCAGGC  1032

seq1  TCCCGGGGAGGGGCTTGGCCTCAACTGGGAATGGTTGGGGTTTATCGTTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGGAGGGGCTTGGCCTCAACTGGGAATGGTTGGGGTTTATCGTTG  1082

seq1  CCATTAGGAGGGGCACCTCCATGTCTAGTTCTCGTTTTTGCACTGAAAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGGAGGGGCACCTCCATGTCTAGTTCTCGTTTTTGCACTGAAAAG  1132

seq1  AATTC  1151
      |||||
seq2  AATTC  1137