BAC Information

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BAC

Clone NameB6Ng01-343A05
Chromosome10 (Build37)
Map Location 36,131,182 - 36,132,385
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041585, LOC667860
Downstream geneHs3st5, Hdac2, Marcks, LOC100040846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343A05.bB6Ng01-343A05.g
ACCGA125915GA125916
length1,2071,199
definitionB6Ng01-343A05.b B6Ng01-343A05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtactccatttttaataggtttatttgattt
tctggagtctatcttcttgagttctttatatatattagatattagtcccc
tatctgatttaggattgataaagatcctttcccaatctgttggtggtcat
tttgtcttattgacagtgtcttttaccttatagaagctttgcaattttat
gaggtccgatttgtcaattctcgatcttacaaactggcaattatcatgta
gaataatgcgaattgatccattcttatttccttgtactaaagtcaagtct
acagggatcaaggaactccacataaaaccagagacactgaaatttataga
ggagaaagtggggaaaagcctcgacgatatgggcacaggggaaaaattcc
tgaacagaacagcaatggcttgtgctgtaaaatcgagaattaacaataac
atcacttttatacatgcctctttccccatcagcatccatagagagattaa
gacaataacaattaggaaggatcattccaagctgggcgtggtggcacatg
cctttaatcccagaacttgggagtcagaggcaggcagatttctgagttcg
aggacagcacggtttacaaagtgagatccaggacagccagggctatacag
agaaaccctgtcttaaaaaaaaataagaaaagaaagaaaagaaaagaaaa
taagaaggatcattccttccttccaaatgcatactttgtagctgcggcta
caaagatctttggaatctttcattgccttaaggatgtttcattaagctga
gagtattccttctgcagaatcatctagggcttagaacaagtattatactc
agcagcttcacaagaatccatggcttgtcctgtgccactttgtgcccctg
tcattgcctccacatgcggtaacacaatccttgttctggtatccatcagg
cctcccttactgcaccatacctctctcagtgatgactttgcttcttgagc
ctttactattagaacctttatcatgcaataagaaaccttcatcagctcct
aagagccaagctacaggtttgcttacatgatgccttttgttgtcagttag
aaaaaaagatgcccttactggcttagttattgagttccaatattccaaag
ccaagaaatgagaaggtcttggaggttcaaggtagaaaggtcaaatctat
agggagg

gaattctctctatagctatatactccatttctttaattaggttgtttggt
tttttgaaggttaggttcttaagttcttcatatatcttggattttagacc
tctatcaggtgtggggttagtgaagactttttcccaatctgaaggttacc
aatttgtcctattgcattacagacacttctcagcttcatgaagttccatt
tatcaattcttgatcttagagcctgagccattagagttatgtttaggaaa
tccccctacccctgtgccaatgagttcaaggcactttcactttctcttct
attcaattcagtgtatctgattttatgttgaagtccttcaccctctagga
cttgcttttttcaaagtgacaactatggatctattttcatttttctgcat
acagactgccagtttggccagcaccatttattgaagatactttttttttt
ctccattgtatatttttggtatctttgtcaaagaccaagtgcctataaat
atgtgggtttatttctaggtcttcaattcttttgcattgattgacctgtc
tgtctctgtacaaataccatgcagttttttatcacaattgctctgtagta
cagcttgaggtcagggatggtgattcccccagaagttcttctattgttaa
gaatggtttatgctatcttggcttttgtgattttccatattaaattgaaa
acttttctttccgtgtctttgaagaatgttgttggaattttgatggggat
tgtgttgaatctatagattgattttggtccatgtgtactatgttaatcct
accaatccatgagcttggaagatctctccattttctgaggtcttctttga
tttccttcttgaaagcttgaagttcttttccgacagatctttgttggtta
gagttatatcaagatattttatattatttgtggctattgtgaagagtgta
tttctctattttcttttttcagtccatttatatttgtatggaggaataca
aaattttttttctagtattttatatccagccacgtgctgaagtgtcagct
gtagacgtttgtctgggtagaatgtgggtgctgaatgtaactatatatca
tctgccaataatgatacttgaccttcttctttggcaatcgtacccttgac
tctagtgtctaattgcctagccatagaagacttacagggtactcattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36131182_36132385
seq2: B6Ng01-343A05.b_44_1250 (reverse)

seq1  CCTCCCTATAGATTTTTCACCTTTTCTTTAACCCCTGAACCTCCAAGGAC  50
      ||||||||||||  ||| ||| |||||     || ||||||||||||   
seq2  CCTCCCTATAGA--TTTGACC-TTTCT----ACCTTGAACCTCCAAG--A  41

seq1  CCTTCTCCATTCTTGGCTTT-GAATA-TGGACCTC-ATTACTA--GCAGT  95
      |||||||  ||||||||||| ||||| |||| ||| || ||||   ||||
seq2  CCTTCTCATTTCTTGGCTTTGGAATATTGGAACTCAATAACTAAGCCAGT  91

seq1  -AGGGCATC--TTTTTCTAACTGAC-ACAAAA-GCATCATGTAAGCAAA-  139
       ||||||||  |||||||||||||| |||||| |||||||||||||||| 
seq2  AAGGGCATCTTTTTTTCTAACTGACAACAAAAGGCATCATGTAAGCAAAC  141

seq1  CTGTAGCTTGGCTCTTAGGAGCTGATGAAGGTTTCTTATTGCATGATAAA  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTTGGCTCTTAGGAGCTGATGAAGGTTTCTTATTGCATGATAAA  191

seq1  GGTTCTAATAGTAAAGGCTCAAG-AGCAAAGTCATCACTGAGAGAGGTAT  238
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGTTCTAATAGTAAAGGCTCAAGAAGCAAAGTCATCACTGAGAGAGGTAT  241

seq1  GGTGCAGTAAGGGAGGCCTGATGGATACCAGAACAAGGATTGTGTTACCG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGTAAGGGAGGCCTGATGGATACCAGAACAAGGATTGTGTTACCG  291

seq1  CATGTGGAGGCAATGACAGGGGCACAAAGTGGCACAGGACAAGCCATGGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGAGGCAATGACAGGGGCACAAAGTGGCACAGGACAAGCCATGGA  341

seq1  TTCTTGTGAAGCTGCTGAGTATAATACTTGTTCTAAGCCCTAGATGATTC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGAAGCTGCTGAGTATAATACTTGTTCTAAGCCCTAGATGATTC  391

seq1  TGCAGAAGGAATACTCTCAGCTTAATGAAACATCCTTAAGGCAATGAAAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGGAATACTCTCAGCTTAATGAAACATCCTTAAGGCAATGAAAG  441

seq1  ATTCCAAAGATCTTTGTAGCCGCAGCTACAAAGTATGCATTTGGAAGGAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAAGATCTTTGTAGCCGCAGCTACAAAGTATGCATTTGGAAGGAA  491

seq1  GGAATGATCCTTCTTATTTTCTTTTCTTTTCTTTCTTTTCTTATTTTTTT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGATCCTTCTTATTTTCTTTTCTTTTCTTTCTTTTCTTATTTTTTT  541

seq1  TTAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGATCTCACTTTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGATCTCACTTTG  591

seq1  TAAACCGTGCTGTCCTCGAACTCAGAAATCTGCCTGCCTCTGACTCCCAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCGTGCTGTCCTCGAACTCAGAAATCTGCCTGCCTCTGACTCCCAA  641

seq1  GTTCTGGGATTAAAGGCATGTGCCACCACGCCCAGCTTGGAATGATCCTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGATTAAAGGCATGTGCCACCACGCCCAGCTTGGAATGATCCTT  691

seq1  CCTAATTGTTATTGTCTTAATCTCTCTATGGATGCTGATGGGGAAAGAGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTGTTATTGTCTTAATCTCTCTATGGATGCTGATGGGGAAAGAGG  741

seq1  CATGTATAAAAGTGATGTTATTGTTAATTCTCGATTTTACAGCACAAGCC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATAAAAGTGATGTTATTGTTAATTCTCGATTTTACAGCACAAGCC  791

seq1  ATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCGTCGAGGCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCGTCGAGGCT  841

seq1  TTTCCCCACTTTCTCCTCTATAAATTTCAGTGTCTCTGGTTTTATGTGGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCACTTTCTCCTCTATAAATTTCAGTGTCTCTGGTTTTATGTGGA  891

seq1  GTTCCTTGATCCCTGTAGACTTGACTTTAGTACAAGGAAATAAGAATGGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTGATCCCTGTAGACTTGACTTTAGTACAAGGAAATAAGAATGGA  941

seq1  TCAATTCGCATTATTCTACATGATAATTGCCAGTTTGTAAGATCGAGAAT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCGCATTATTCTACATGATAATTGCCAGTTTGTAAGATCGAGAAT  991

seq1  TGACAAATCGGACCTCATAAAATTGCAAAGCTTCTATAAGGTAAAAGACA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATCGGACCTCATAAAATTGCAAAGCTTCTATAAGGTAAAAGACA  1041

seq1  CTGTCAATAAGACAAAATGACCACCAACAGATTGGGAAAGGATCTTTATC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAATAAGACAAAATGACCACCAACAGATTGGGAAAGGATCTTTATC  1091

seq1  AATCCTAAATCAGATAGGGGACTAATATCTAATATATATAAAGAACTCAA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAAATCAGATAGGGGACTAATATCTAATATATATAAAGAACTCAA  1141

seq1  GAAGATAGACTCCAGAAAATCAAATAAACCTATTAAAAATGGAGTACAGA  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGACTCCAGAAAATCAAATAAACCTATTAAAAATGGAGTACAGA  1191

seq1  GCTAAACAAAGAATTC  1204
      ||||||||||||||||
seq2  GCTAAACAAAGAATTC  1207


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