BAC Information

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BAC

Clone NameB6Ng01-343B09
Chromosome10 (Build37)
Map Location 90,604,881 - 90,705,732
singlet/doubletdoublet
Overlap geneTmpo, LOC100041769
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3
Downstream geneLOC100041799, LOC667203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343B09.bB6Ng01-343B09.g
ACCGA125960GA125961
length471817
definitionB6Ng01-343B09.b B6Ng01-343B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,705,257 - 90,705,732)(90,604,881 - 90,605,695)
sequence
cctcccctgtgttaactcatgaatagcgctcccttccattaaatgcaccc
ataaaagaagctagcagtcactccgaagcccagcagggcagcttactctt
gagaaaaccacaccctccccttgccactctctgtttcttaataaccccaa
cttcttcaaaattcgaacgaaaattctgtgaactcagaatataatgccca
agaaaggaaatatgcggaaatatgtacccacttcttccccctcttccttc
ccacaaatcttcacacacacacacacacacacacacatacacaaccagtg
gatctgaaaggcagattgagccctgctagtggccagtcacacaataaacc
ttcctgtttggggtggaggacagagggtgggggaggagagggcaatttca
gtagtattggcttctgggtgagtgtggtagcttaccccttactgtatact
tttggtttcaacgttaaaatt
gaattctgatttttttaagattacgaggcactttttccacggatgaataa
tgatgttgagaatcttcccatatgcttcaggggtatttgtgtactttctt
tgggaagatgtagtctcaggtcacattcaacaaatctttgttacccggag
tgaccttgaactctgggttcaaagaacaggtgagactactgaaacttgac
cctggtgcccagctctttgtttagtttaaaaattttttttttttttaaag
acttatttatttattatatgtaagtacactgtagctgtcttcagacactc
cagaagagggagtcagatcttgttacggatggttgtgagccaccatgtgg
ttgctgggatttgaactctggaccatcggaagagcagtcgggtgctctaa
cccactgagccatctcaccagccctagtttaaaaaattttttaaatgatt
tgtctcatatgcattgatgttttgcctgcatgttgtgccttgaacatctt
gcctgtgcaagggtgtcaggtcccctgaagctgagagacagttgttgctg
ccgcctatgaccttctactttggctttaagaatgtggaattgttgttttg
gtttggaaattaatactcccgcagagatggttggcaggattcgacagccc
atggagggtctgctgcataggtcgcaagtcagcatctgctacaactcaat
gtctgtttcgggaccaatggaaccagcttttggagacacactcgctgtgg
gcagatgctgaacttctgcagacagcgcttttacgccatctagtgaatca
ccaccacttcctcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90705257_90705732
seq2: B6Ng01-343B09.b_46_521 (reverse)

seq1  ATTTTAAAGAAGAAACCAATGGTATGCAGTAAGGGCTATGCTACCAGACT  50
      ||||||| |  ||||||||  |||| ||||||||| || ||||||| |||
seq2  ATTTTAACGTTGAAACCAAAAGTATACAGTAAGGGGTAAGCTACCACACT  50

seq1  CACCCAGAAGCCAATGCTACTGAAATTGCCCTCTCCTCCCCCACCCTCTG  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CACCCAGAAGCCAATACTACTGAAATTGCCCTCTCCTCCCCCACCCTCTG  100

seq1  TCCTCCACCCCAAACAGGAAGGTTTATTGTGTGACTGGCCACTAGCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACCCCAAACAGGAAGGTTTATTGTGTGACTGGCCACTAGCAGGG  150

seq1  CTCAATCTGCCTTTCAGATCCACTGGTTGTGTATGTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCTGCCTTTCAGATCCACTGGTTGTGTATGTGTGTGTGTGTGTGT  200

seq1  GTGTGTGTGAAGATTTGTGGGAAGGAAGAGGGGGAAGAAGTGGGTACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGAAGATTTGTGGGAAGGAAGAGGGGGAAGAAGTGGGTACATA  250

seq1  TTTCCGCATATTTCCTTTCTTGGGCATTATATTCTGAGTTCACAGAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGCATATTTCCTTTCTTGGGCATTATATTCTGAGTTCACAGAATTT  300

seq1  TCGTTCGAATTTTGAAGAAGTTGGGGTTATTAAGAAACAGAGAGTGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCGAATTTTGAAGAAGTTGGGGTTATTAAGAAACAGAGAGTGGCAA  350

seq1  GGGGAGGGTGTGGTTTTCTCAAGAGTAAGCTGCCCTGCTGGGCTTCGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGTGTGGTTTTCTCAAGAGTAAGCTGCCCTGCTGGGCTTCGGAG  400

seq1  TGACTGCTAGCTTCTTTTATGGGTGCATTTAATGGAAGGGAGCGCTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTAGCTTCTTTTATGGGTGCATTTAATGGAAGGGAGCGCTATTC  450

seq1  ATGAGTTAACACAGGGGAGGGAATTC  476
      ||||||||||||||||||||||||||
seq2  ATGAGTTAACACAGGGGAGGGAATTC  476

seq1: chr10_90604881_90605695
seq2: B6Ng01-343B09.g_68_884

seq1  GAATTCTGATTTTTTTAAGATTACGAGGCACTTTTTCCACGGATGAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTTTTTTAAGATTACGAGGCACTTTTTCCACGGATGAATAA  50

seq1  TGATGTTGAGAATCTTCCCATATGCTTCAGGGGTATTTGTGTACTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTGAGAATCTTCCCATATGCTTCAGGGGTATTTGTGTACTTTCTT  100

seq1  TGGGAAGATGTAGTCTCAGGTCACATTCAACAAATCTTTGTTACCCGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGATGTAGTCTCAGGTCACATTCAACAAATCTTTGTTACCCGGAG  150

seq1  TGACCTTGAACTCTGGGTTCAAAGAACAGGTGAGACTACTGAAACTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGAACTCTGGGTTCAAAGAACAGGTGAGACTACTGAAACTTGAC  200

seq1  CCTGGTGCCCAGCTCTTTGTTTAGTTTAAAAATTTTTTTTTTTTTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGCCCAGCTCTTTGTTTAGTTTAAAAATTTTTTTTTTTTTTAAAG  250

seq1  ACTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTC  300

seq1  CAGAAGAGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGG  350

seq1  TTGCTGGGATTTGAACTCTGGACCATCGGAAGAGCAGTCGGGTGCTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGATTTGAACTCTGGACCATCGGAAGAGCAGTCGGGTGCTCTAA  400

seq1  CCCACTGAGCCATCTCACCAGCCCTAGTTTAAAAAATTTTTTAAATGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGCCATCTCACCAGCCCTAGTTTAAAAAATTTTTTAAATGATT  450

seq1  TGTCTCATATGCATTGATGTTTTGCCTGCATGTTGTGCCTTGAACATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATATGCATTGATGTTTTGCCTGCATGTTGTGCCTTGAACATCTT  500

seq1  GCCTGTGCAAGGGTGTCAGGTCCCCTGAAGCTGAGAGACAGTTGTTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGCAAGGGTGTCAGGTCCCCTGAAGCTGAGAGACAGTTGTTGCTG  550

seq1  CCGCCTATGACCTTCTACTTTGGCTTTAAGAATGTGGAATTGTTGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTATGACCTTCTACTTTGGCTTTAAGAATGTGGAATTGTTGTTTTG  600

seq1  GTTTGGAAATTAATACTCCCGCAGAGATGGTTGGCAGGATTCGACAGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAAATTAATACTCCCGCAGAGATGGTTGGCAGGATTCGACAGCCC  650

seq1  ATGGAGGGTCTGCTGCATAGGTCGCAAGTCAGCATCTGCTACAACTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGTCTGCTGCATAGGTCGCAAGTCAGCATCTGCTACAACTCAAT  700

seq1  GCCTGTTTCGGGACCAGTGGAACCAGC-TTTGGAGACACACACGCTGTGG  749
      | |||||||||||||| |||||||||| ||||||||||||| ||||||||
seq2  GTCTGTTTCGGGACCAATGGAACCAGCTTTTGGAGACACACTCGCTGTGG  750

seq1  GCAGATGCTG-ACTTCTGCAGACAGCGC-TTTACGCCATCTAGGTGATCA  797
      |||||||||| ||||||||||||||||| ||||||||||||||   ||||
seq2  GCAGATGCTGAACTTCTGCAGACAGCGCTTTTACGCCATCTAGTGAATCA  800

seq1  CCAGCAACTTCCTCATGT  815
      ||| | ||||||||||||
seq2  CCA-CCACTTCCTCATGT  817