BAC Information

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BAC

Clone NameB6Ng01-343M10
Chromosome10 (Build37)
Map Location 20,655,641 - 20,656,176
singlet/doubletsinglet
Overlap genenone
Upstream geneMap3k5, Mtap7, EG621697, Bclaf1, 2610016C23Rik, LOC382344, Pde7b, LOC667202
Downstream geneAhi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936, LOC628133
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343M10.bB6Ng01-343M10.g
ACCGA126465GA126466
length1,1571,208
definitionB6Ng01-343M10.b B6Ng01-343M10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtttgttcagaaaatggtaggtgtttttgttgtatttagttc
tatgctggtctggttttgtcaacttgatgtgaaactagacatatccggga
agaaggaatctcagttgaggggaaaaagcctccatttgattaccctgtag
gcaagtctgtaggacatttgcctggctaatcatcactgtggagttaacca
gtcattgatgtgggagttaaccaatcactgatgtgggagggtccagggca
ttggggatagtgccactcctaggcaggtgtccttggaggatctaagaaat
caggtggagcaaaccatgggaagcaagctgataggcaccactcttccacc
agtcaagttgacaagcagcactcttccatcagttcctgatgccagaggtt
cctgccttgaatacttgccttggctgccctgatgatggagcctgtgagcc
aaataaaccctttcctccccaagttgcttttggtcattatgttatcacag
caattgaagccaaattaagacaagatctttgaatgagttcttaagatcca
taattgtagcaagatcaatctatttgatgtggtccatctattccaaagtt
taactcatcaaaactcccctaatagaaacatttagcataactttaggcca
agtatctggacccacattaatcagttgcatgtgtatgtatatatatgtat
atgtgtatgtgtacacatacacacacacacacacacacacacacatgctt
ttcttgataaaattcaataaaatattacatttcccttttttaatggaatg
aagacatagaaagtgctttgacccttctctgtctacagttgatatgaact
gcagctgatatgaaaaagaaatgaggtaaaactttttagaaaagggcttc
tcacagtgggtggtgcaagtctttaatcccagcactcaggaggcagaggt
gggtagatttctgggtacaatgtcatcccaatctacagagtgagttccag
ggcaggggagcttcccagagaatcctctgttctcaaatatctaaataaaa
attttgccaagtttttcaactggtgcataatgtttagtggagccctatga
atgctagcatatgccatgctaaaagtatagcatacttacaggggcaaggt
gtggggt
gaattcacccattatcactggatgagtgtcagtgtgtgcttttaccagta
gtagtgattccttcatgaacttgagtcccttctgtttgctacatagatgt
ttagaattcagactgttggtattaagagttatcaatgagcggtgtttgtt
tgttcctattattttgttgtggtgctgtgtgtaaatgcccctccccttcc
tgcatctttgattttcttgtctgagagtatttattccttgtattttaaac
ttggctgaattttccccagtatcttctgtcgagctggatttatagataca
tatagttttattatggaatgtctttctctttctattatgatttaaagttt
ttctggatatagtagtctaggctggcatctgtggtctctttgagtctgta
gaacatctgtctgggccctgctggattttagagtttcattgagaagtcag
gtgttgttctaataaatatgtccttatgttatttgttcccccttgtggct
tttaatatccttagtcctgtatgtttagtggtttgattatttatgccaag
gggaatttcttttcttgtctactccagtgttctgtatatttcttgtgcct
taataagtagcttctttaggttggggaaatttttgtctactatgttgatg
aagatgttttctgtgcttttgacctgggtttctttttcctcctctatgta
gttttctattatgtagttttggtcttttttatagtgtcccagatttcctg
actgttcttccgtacttggatttttttttaatttatttaatattttcttt
gactgaggtatccatttctttagtcttcaatgattcagatgctctcttcc
atctcttgtactccgttactgagtcttgcctctgatcagggctgccattc
gtattcctaaaatttacacttccagatttcactcagttgggttttctttg
tggtttttattttctatttccatgtcttaaagtgttgtcttcatttcttt
caactatttttttgtgtcttcatagatttattaatgaataaaattcatta
ttcattttaaaggtcttaagcaccatcataattgactattttgaagtcct
tccttgtgtttcacctgggatgcaatttctcataggattggctcgaagtg
tagtctctaggaaattatttgactcggcggttttaattgccattgtcacc
atgacaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_20655641_20656176
seq2: B6Ng01-343M10.b_672_1204 (reverse)

seq1  ACCCCAC-CCTTGCCCCTGTAAGTATGCTATACTTTTAGC-TGGCATATA  48
      ||||||| |||||||||||||||||||||||||||||||| |||||||| 
seq2  ACCCCACACCTTGCCCCTGTAAGTATGCTATACTTTTAGCATGGCATAT-  49

seq1  GCTAGCATTTTAATAGGGGCTCACTAAACATTATTGCCACAGTTTGAAAA  98
      |||||||  || ||||||   |||||||||||| |||  |||||   |||
seq2  GCTAGCA--TTCATAGGGCTCCACTAAACATTA-TGCACCAGTT--GAAA  94

seq1  AACTTGGCAAATTTTTTTTTTTTGGTTTTTTTGAG-ACAGA-GATTCTCT  146
      ||||||||||| ||||| |||      | |||||| ||||| ||||||||
seq2  AACTTGGCAAAATTTTTATTT---AGATATTTGAGAACAGAGGATTCTCT  141

seq1  GTGTAGCCTCCCCTGCCCTGGAACTCACTCTGTAGATTGGGATGACATTG  196
      | | || |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAG-CTCCCCTGCCCTGGAACTCACTCTGTAGATTGGGATGACATTG  190

seq1  TACCCAGAAATCTACCCACCTCTGCCTCCTGAGTGCTGGGATTAAAGACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGAAATCTACCCACCTCTGCCTCCTGAGTGCTGGGATTAAAGACT  240

seq1  TGCACCA-CCACTGTGAGAAGCCCTTTTCT-AAAAGTTTTACCTCATTTC  294
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  TGCACCACCCACTGTGAGAAGCCCTTTTCTAAAAAGTTTTACCTCATTTC  290

seq1  TTTTTCATATCAGCTGCAGTTCATATCAACTGTAGACAGAGAAGGGTCAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATATCAGCTGCAGTTCATATCAACTGTAGACAGAGAAGGGTCAA  340

seq1  AGCACTTTCTATGTCTTCATTCCATTAAAAAAGGGAAATGTAATATTTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTCTATGTCTTCATTCCATTAAAAAAGGGAAATGTAATATTTTA  390

seq1  TTGAATTTTATCAAG-AAAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTA  443
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGAATTTTATCAAGAAAAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTA  440

seq1  TGTGTACACATACACATATACATATATATACATACACATGCAACTGATTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACACATACACATATACATATATATACATACACATGCAACTGATTA  490

seq1  ATGTGGGTCCAGATACTTGGCCTAAAGTTATGCTAAATGTTTC  536
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGTCCAGATACTTGGCCTAAAGTTATGCTAAATGTTTC  533