BAC Information

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BAC

Clone NameB6Ng01-343O14
Chromosome10 (Build37)
Map Location 103,148,486 - 103,283,673
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343O14.bB6Ng01-343O14.g
ACCGA126562GA126563
length8881,130
definitionB6Ng01-343O14.b B6Ng01-343O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,148,486 - 103,149,089)(103,282,536 - 103,283,673)
sequence
gaattcctggcattactatctgtgcatggcagcagctttttcatgtgggc
atctctgatttccttcacatctgcagatgtaacagctttgctgtctgggc
tacattaagtattttgaaattctactaacagcacatgaaaaacaggataa
ctcctgtaagatgaagaagatattgcatcaaaaattctgagctgaatctt
tgggagggaatctgaatcggcttgaaacagttgaaaatggcccccaggaa
tgtggtttgtgtgggattaactgaagtcacttcagcttggaaattgcagc
ttctaaaggacagctcatcccaatacccacagttcttaacctatgcttgt
tttacagaacccaaaccagatgcaaacaatttaatggcatttaacaaaat
cgttgtgtggaaacccacagtggaatggtgcccacagatcattattcaga
ctttcttggaattctatttatttaaaaagtgttgctaagtatagaaaaga
cagtaatcaatatactacactcatagttctccaacttatattgctctccc
tgtctctcggtctctctgtgtctctgcctctcctctcctctcctctcctc
tcctatctttatttcttttctgtgcacctgactcaaactctgacaagcca
tattttcatgcttcctaaacacattccctgcttccctgccagtcatcgtg
gtttgtttctcttcgttttctgtaacccaaaattgattgtttccttcttt
ctctaaggtcatggtattttgtatgtttgggtgatgcatgcctatctatg
tatatgtgtgtatatgctgcatgtggaaagccagatgaggaagggccatc
cagtgcctccctctgttatttctctgtcttactcttga
gaattcctttgaacttgatctttacttcttcctcactcaggggattctct
gtatttattttgcactagagccaatcctcagaactattcacctaccccgc
tttccttcagtgaagtttactcttcaagtcttctgtggcaatttgattag
tatgtatctaaacatacaatgccatggttctcagcattgttttgctctcc
tttaattctttgaagctgtgttcacctaaacaatcaagctacttttattt
gtttgtcccatcacttgtctattccttccattgccctgttcgaaacacag
accacaaagcatgtttagcaatgtaaataatatgtttaaaatatgtttca
aatattattaagaataagatttcaacataaacacagacctaagaacatat
tttagctatttctgagtagaggtaacattctttacaaactattgtccatc
ttcaatgtaaaaatgtaattttctttttagaacttctgcacttgagagct
aataatataacctggcctctgtttagcttctccatccaatgtgtcatctg
tttcccattggttaatattatttcttgcagatgacaggaaatgcaattca
aactggcttaaacaacaatagagatatcttattgcttcatgtaactaaat
tgctcacatgtaagttttcaggtgctgcttgatgtagagcctcctatgct
atcaacaatacttatatccaatacatatcttggctctgaaacgataatat
tggccttgttatctaccgcgaaatcccaggatttcatgtgaaaatgagag
gctccaaatctgcctgtcttttgtttcttctctctctttattattattat
tattattaattgttcactttttaaattcctttctttcagacgctaaggat
catcacaatgcatctcataaatttttggttgcttatcatttagccatcac
tgagtgcagtagaattttcttttatttctaagaatttgagtctctatctg
cttgccctaaacttaacactagataataatcttcttgtaaagaacaaaaa
gatgaaaaagatgtcagagatcattttacataagttcacaatgataagaa
gcacatacacattggtgaggaaatctataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103148486_103149089
seq2: B6Ng01-343O14.b_48_651

seq1  GAATTCCTGGCATTACTATCTGTGCATGGCAGCAGCTTTTTCATGTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCATTACTATCTGTGCATGGCAGCAGCTTTTTCATGTGGGC  50

seq1  ATCTCTGATTTCCTTCACATCTGCAGATGTAACAGCTTTGCTGTCTGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGATTTCCTTCACATCTGCAGATGTAACAGCTTTGCTGTCTGGGC  100

seq1  TACATTAAGTATTTTGAAATTCTACTAACAGCACATGAAAAACAGGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAAGTATTTTGAAATTCTACTAACAGCACATGAAAAACAGGATAA  150

seq1  CTCCTGTAAGATGAAGAAGATATTGCATCAAAAATTCTGAGCTGAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTAAGATGAAGAAGATATTGCATCAAAAATTCTGAGCTGAATCTT  200

seq1  TGGGAGGGAATCTGAATCGGCTTGAAACAGTTGAAAATGGCCCCCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGAATCTGAATCGGCTTGAAACAGTTGAAAATGGCCCCCAGGAA  250

seq1  TGTGGTTTGTGTGGGATTAACTGAAGTCACTTCAGCTTGGAAATTGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTGTGTGGGATTAACTGAAGTCACTTCAGCTTGGAAATTGCAGC  300

seq1  TTCTAAAGGACAGCTCATCCCAATACCCACAGTTCTTAACCTATGCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGGACAGCTCATCCCAATACCCACAGTTCTTAACCTATGCTTGT  350

seq1  TTTACAGAACCCAAACCAGATGCAAACAATTTAATGGCATTTAACAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGAACCCAAACCAGATGCAAACAATTTAATGGCATTTAACAAAAT  400

seq1  CGTTGTGTGGAAACCCACAGTGGAATGGTGCCCACAGATCATTATTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTGTGGAAACCCACAGTGGAATGGTGCCCACAGATCATTATTCAGA  450

seq1  CTTTCTTGGAATTCTATTTATTTAAAAAGTGTTGCTAAGTATAGAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGGAATTCTATTTATTTAAAAAGTGTTGCTAAGTATAGAAAAGA  500

seq1  CAGTAATCAATATACTACACTCATAGTTCTCCAACTTATATTGCTCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATCAATATACTACACTCATAGTTCTCCAACTTATATTGCTCTCCC  550

seq1  TGTCTCTCGGTCTCTCTGTGTCTCTGCCTCTCCTCTCCTCTCCTCTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCGGTCTCTCTGTGTCTCTGCCTCTCCTCTCCTCTCCTCTCCTC  600

seq1  TCCT  604
      ||||
seq2  TCCT  604

seq1: chr10_103282536_103283673
seq2: B6Ng01-343O14.g_69_1198 (reverse)

seq1  TTATAGGATTTTCCTCACCCATGTGTATGTGC-TCTTATCATTGTTGAAA  49
      ||||||   |||||||||| |||||||||||| ||||||||||| |||| 
seq2  TTATAG--ATTTCCTCACCAATGTGTATGTGCTTCTTATCATTG-TGAAC  47

seq1  CTATGTAAAATGATCCTCTTGACATCTTTTTTCATCTTTTTGTTCCTTTA  99
       ||||||||||||| ||| ||||||| ||||||||||||||||| |||||
seq2  TTATGTAAAATGAT-CTC-TGACATC-TTTTTCATCTTTTTGTT-CTTTA  93

seq1  C-AGAAGATTATTTATCTAGTGTTAAGTTTAGGGCAAGCAGATAGGAGAC  148
      | ||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  CAAGAAGATTA-TTATCTAGTGTTAAGTTTAGGGCAAGCAGATA-GAGAC  141

seq1  TCAAATTCTTAGGAATAAAAGAAAATTCTACTGCACTCAGTGATGGCTAA  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCTTAGAAATAAAAGAAAATTCTACTGCACTCAGTGATGGCTAA  191

seq1  ATGATAAGCAACCAAAAATTTATGAGATGCATTGTGATGATCCTTTAGCG  248
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGATAAGCAACCAAAAATTTATGAGATGCATTGTGATGATCC-TTAGCG  240

seq1  TCTGAAAGAAAGGAATTTAAAAAGTGAACAATTAATAATAATAATAATAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAGAAAGGAATTTAAAAAGTGAACAATTAATAATAATAATAATAA  290

seq1  TAAAGAGAGAGAAGAAACAAAAGACAGGCAGATTTGGAGCCTCTCATTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGAGAGAAGAAACAAAAGACAGGCAGATTTGGAGCCTCTCATTTT  340

seq1  CACATGAAATCCTGGGATTTCGCGGTAGATAACAAGGCCAATATTATCGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAAATCCTGGGATTTCGCGGTAGATAACAAGGCCAATATTATCGT  390

seq1  TTCAGAGCCAAGATATGTATTGGATATAAGTATTGTTGATAGCATAGGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGCCAAGATATGTATTGGATATAAGTATTGTTGATAGCATAGGAG  440

seq1  GCTCTACATCAAGCAGCACCTGAAAACTTACATGTGAGCAATTTAGTTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACATCAAGCAGCACCTGAAAACTTACATGTGAGCAATTTAGTTAC  490

seq1  ATGAAGCAATAAGATATCTCTATTGTTGTTTAAGCCAGTTTGAATTGCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCAATAAGATATCTCTATTGTTGTTTAAGCCAGTTTGAATTGCAT  540

seq1  TTCCTGTCATCTGCAAGAAATAATATTAACCAATGGGAAACAGATGACAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCATCTGCAAGAAATAATATTAACCAATGGGAAACAGATGACAC  590

seq1  ATTGGATGGAGAAGCTAAACAGAGGCCAGGTTATATTATTAGCTCTCAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATGGAGAAGCTAAACAGAGGCCAGGTTATATTATTAGCTCTCAAG  640

seq1  TGCAGAAGTTCTAAAAAGAAAATTACATTTTTACATTGAAGATGGACAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGTTCTAAAAAGAAAATTACATTTTTACATTGAAGATGGACAAT  690

seq1  AGTTTGTAAAGAATGTTACCTCTACTCAGAAATAGCTAAAATATGTTCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTAAAGAATGTTACCTCTACTCAGAAATAGCTAAAATATGTTCTT  740

seq1  AGGTCTGTGTTTATGTTGAAATCTTATTCTTAATAATATTTGAAACATAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTGTTTATGTTGAAATCTTATTCTTAATAATATTTGAAACATAT  790

seq1  TTTAAACATATTATTTACATTGCTAAACATGCTTTGTGGTCTGTGTTTCG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACATATTATTTACATTGCTAAACATGCTTTGTGGTCTGTGTTTCG  840

seq1  AACAGGGCAATGGAAGGAATAGACAAGTGATGGGACAAACAAATAAAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGCAATGGAAGGAATAGACAAGTGATGGGACAAACAAATAAAAGT  890

seq1  AGCTTGATTGTTTAGGTGAACACAGCTTCAAAGAATTAAAGGAGAGCAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGATTGTTTAGGTGAACACAGCTTCAAAGAATTAAAGGAGAGCAAA  940

seq1  ACAATGCTGAGAACCATGGCATTGTATGTTTAGATACATACTAATCAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTGAGAACCATGGCATTGTATGTTTAGATACATACTAATCAAAT  990

seq1  TGCCACAGAAGACTTGAAGAGTAAACTTCACTGAAGGAAAGCGGGGTAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGAAGACTTGAAGAGTAAACTTCACTGAAGGAAAGCGGGGTAGG  1040

seq1  TGAATAGTTCTGAGGATTGGCTCTAGTGCAAAATAAATACAGAGAATCCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTTCTGAGGATTGGCTCTAGTGCAAAATAAATACAGAGAATCCC  1090

seq1  CTGAGTGAGGAAGAAGTAAAGATCAAGTTCAAAGGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGAGGAAGAAGTAAAGATCAAGTTCAAAGGAATTC  1130