BAC Information

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BAC

Clone NameB6Ng01-344K04
Chromosome10 (Build37)
Map Location 78,121,642 - 78,121,906
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl, D10Jhu81e, Pwp2, Tmem1, Agpat3, LOC100041500, Rrp1, Cstb, Pdxk, EG665862, Olfr1358, LOC546482, Ilvbl, Syde1, Olfr1357, LOC665890
Downstream geneCasp14, Ccdc105, Slc1a6, Olfr1356, GA_x5J8B7W4DUT-12263-11330, GA_x5J8B7TPDN2-1058-1265, Olfr233-ps1, Olfr8, GA_x5J8B7TNKDU-1250-1574, Olfr1353, Olfr1352, Olfr1351, Olfr57, 2610008E11Rik, EG624765, AJ543404, LOC100041709, EG624845, EG625029, Ppap2c, Mier2, Theg, 4932409I22Rik, Shc2, Gm1157
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344K04.bB6Ng01-344K04.g
ACCGA127071GA127072
length265976
definitionB6Ng01-344K04.b B6Ng01-344K04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgcctccctagactcttgctcttacactctttgcacagcatgacaccttt
tacaagtctttcctcccattccttaaaaggatcctgaattttattcttgg
tgtctctaatcttctttccaagctcttttagacggtattatattttgtaa
caaaaaataatctatatagtgatgatctacttatagtcaaagagaagata
ctcaggtttggataatttttatttttataacaatgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtg
gaattctctgtttagctctgtgtgtcattttaattgggttatttggcttc
ctgatgttttatgtcttgagttatttatattgaaagggcaacataaaccc
catattctcgatttaaagtcccccatttgtttccatttaaggaccccatt
tgtctccatttaaataccagggctcaggaatagaccatgaaatctagaac
gagatcataaactctcctcccaaagaactgcctggagataactacaaaaa
ttgggaaaagtcttatctcagaatgggccatatgcgttgggcagccctat
ctcatcctacagttagatgttcatgacataggagtgcagaaggcagaggc
aggcggatctctgagttcgaggccagcctggtctacaaagtgagttcagg
acagccagggctatacagagaaatcctgtcttgaaaaaccaaaaccaaaa
aaaaaaaaaaaaaaaaaaaaaaaaagagtacagagctaaacaaagaattc
ttacctgaggaatactgaatggctgagaagcccctgaaaaaatgttcaac
atccttaatcatcagggaaatacaaataaaaacaaccctgagattccacc
tcacaccagtcagaatggctaagatcaaagattcaggtgacagcagatgc
tggcaaggatgtggagaaagaggagcactcctccattgccggtaggattg
caagcttgtataaccactctggaaatcagtctggtggttcctcagaaaat
tggacatagtactaccagaagatcccgcaatacctctcctgggcatattc
ccagaagatgttccaactggtaataaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgtccct
cagcagaagaatggatacagaaaatgtggtacatttatacaatggagtac
tactcagctattaaaaacatgattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_78121642_78121906
seq2: B6Ng01-344K04.b_54_318 (reverse)

seq1  CACACACACACACACACACACACACACACACATTGTTATAAAAATAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACATTGTTATAAAAATAAAAA  50

seq1  TTATCCAAACCTGAGTATCTTCTCTTTGACTATAAGTAGATCATCACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAAACCTGAGTATCTTCTCTTTGACTATAAGTAGATCATCACTAT  100

seq1  ATAGATTATTTTTTGTTACAAAATATAATACCGTCTAAAAGAGCTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTATTTTTTGTTACAAAATATAATACCGTCTAAAAGAGCTTGGAA  150

seq1  AGAAGATTAGAGACACCAAGAATAAAATTCAGGATCCTTTTAAGGAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTAGAGACACCAAGAATAAAATTCAGGATCCTTTTAAGGAATGG  200

seq1  GAGGAAAGACTTGTAAAAGGTGTCATGCTGTGCAAAGAGTGTAAGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGACTTGTAAAAGGTGTCATGCTGTGCAAAGAGTGTAAGAGCAA  250

seq1  GAGTCTAGGGAGGCA  265
      |||||||||||||||
seq2  GAGTCTAGGGAGGCA  265