BAC Information

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BAC

Clone NameB6Ng01-345G06
Chromosome10 (Build37)
Map Location 129,128,417 - 129,129,528
singlet/doubletsinglet
Overlap geneOlfr803
Upstream geneRab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802
Downstream geneOlfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345G06.bB6Ng01-345G06.g
ACCGA127602GA127603
length1,1131,137
definitionB6Ng01-345G06.b B6Ng01-345G06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaaaatagtcctgaaaatgtacatgtaagataaaatcaccaat
gccaatgtgaacagtagagtaaccagagcaacatagaaaccaatcacttc
taggagccaagtatctgagcaagacagttgtaagaggggaaaatagtcac
agcagaagtgatcaatgacattggaagcacagaaatctaactttaggacc
agcataagtggtgggaagatggtcaggaatcctgccagccatgaggtgag
gacaagaagggtgcagactttctgattcatgatgagggtgtagtgcagtg
gcttgcagatggcaacataacgatcgtaagacatagcggttagaagaaaa
aactctgtcacccccatgaagatgaagaaaaataactgagcaaaacaatt
attataggaaatggtcttgacttgggtaattattgatgccaggaatctgg
gaatggaaacactagtgaacataatttctaagaaggagaaattacgaagg
aaataatacataggagtctttaagtgagagtccaacaatgtgaggaggat
aatggttaggtttccagtgatgcttactatgtaagttattaataaaaaga
cgaaaattactacctgaagctctctgttgcctgatattcccaagagcaca
aactctgtaattatagtgtagtttttcatacttaatttctcttctaataa
aatatattgatgaaaaagagaccaaagagcttatttaatgagatggaatt
gaaatttttatatgctgatattactatctccaacaaaacattgcaatgac
ttcccttccttgtaagacttgctgcatgtgcatttttccaggtttcatct
aacatttttgttaatcagcattgtcttcctttataaatacatatagatgt
cattaatatatcatcaaagcatgcaggtcaaagccaatacttgtgttcat
tattattgaaatagagaccatataccatactatattgaaaagggatatat
acttatgggtcagcataaaattcctttagtatgttttttatatgaaacat
aataaaaatgtgtacacacattatgtgtatacacatgaaagaacatattg
gcttcgtagtaat
gaattcaagatggaggaacctctgtactgtcttgccctgtcaagtagtct
ccttacagacaagtctatttacatcagagtctaaatgtaatttgtgtttg
caaaccatgagatacagttcttggacagccattaactagcaggaagaatc
taaatgtatatgcatacattagagtacatggattttatttgtgtagaata
ttcttgcaggtggccagataaactaacctttaacatctacccaaagggga
atggatgaaaataaaaaggaggagacaaaaaccaaccaaacaaatgaagc
caaaacagaaaaaaaatggcatttaaattaccaccagtctggagacctga
catataatataaggtagccacagagttggggagaaagttttagagaaaaa
gcagggaagcccagagtgtcagagaaaacattcttatgttatggccaaaa
tcagtatgagacaggagagagagagagagagaaagtcagggagggaaata
gagtcagaggtcacagagacagacagagagagacaaagagagacagagaa
agagtctgcttggtagacctaaaagcctggaagcagtcacatggcaaaga
gtttcacagaaacagcctcctggaaccttggcattccaataacctgtata
ctcgaaccctgtccccgtgttagtctggtgtgtgtattcatgtgctcttt
ttcagtatagttttattataagtgcctttaaggattgattttgacatata
gctaagcctttgccagtgttcttatgtcctagaaaatccttgaagcccac
tataagcccggaattcagtaagaatgctacctattcagtaacattcttaa
ttctagtagagacagtgaaaataatcacacatactaattacttgaacaga
gctagaaaagctcaggctagtctgcatagtaattacttaggacatagccg
agtcatacccaaacacaaaaaatacaaaatggtctaggaaatagtgggtt
ggtggaaggctagtgggaagggatttccactggagcagctttctgcactt
agtccagagataggcattatcaagtaattacctacgagtcctgctgtggc
ttaaccataggaccttagccaattacagactcaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129128417_129129528
seq2: B6Ng01-345G06.b_45_1157

seq1  GAATTCTTAAAATAGTCCTGAAAATGTACATGTAAGATAAAATCACCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAATAGTCCTGAAAATGTACATGTAAGATAAAATCACCAAT  50

seq1  GCCAATGTGAACAGTAGAGTAACCAGAGCAACATAGAAACCAATCACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGTGAACAGTAGAGTAACCAGAGCAACATAGAAACCAATCACTTC  100

seq1  TAGGAGCCAAGTATCTGAGCAAGACAGTTGTAAGAGGGGAAAATAGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCAAGTATCTGAGCAAGACAGTTGTAAGAGGGGAAAATAGTCAC  150

seq1  AGCAGAAGTGATCAATGACATTGGAAGCACAGAAATCTAACTTTAGGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGTGATCAATGACATTGGAAGCACAGAAATCTAACTTTAGGACC  200

seq1  AGCATAAGTGGTGGGAAGATGGTCAGGAATCCTGCCAGCCATGAGGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGTGGTGGGAAGATGGTCAGGAATCCTGCCAGCCATGAGGTGAG  250

seq1  GACAAGAAGGGTGCAGACTTTCTGATTCATGATGAGGGTGTAGTGCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAAGGGTGCAGACTTTCTGATTCATGATGAGGGTGTAGTGCAGTG  300

seq1  GCTTGCAGATGGCAACATAACGATCGTAAGACATAGCGGTTAGAAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGATGGCAACATAACGATCGTAAGACATAGCGGTTAGAAGAAAA  350

seq1  AACTCTGTCACCCCCATGAAGATGAAGAAAAATAACTGAGCAAAACAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTCACCCCCATGAAGATGAAGAAAAATAACTGAGCAAAACAATT  400

seq1  ATTATAGGAAATGGTCTTGACTTGGGTAATTATTGATGCCAGGAATCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGAAATGGTCTTGACTTGGGTAATTATTGATGCCAGGAATCTGG  450

seq1  GAATGGAAACACTAGTGAACATAATTTCTAAGAAGGAGAAATTACGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAAACACTAGTGAACATAATTTCTAAGAAGGAGAAATTACGAAGG  500

seq1  AAATAATACATAGGAGTCTTTAAGTGAGAGTCCAACAATGTGAGGAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATACATAGGAGTCTTTAAGTGAGAGTCCAACAATGTGAGGAGGAT  550

seq1  AATGGTTAGGTTTCCAGTGATGCTTACTATGTAAGTTATTAATAAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTAGGTTTCCAGTGATGCTTACTATGTAAGTTATTAATAAAAAGA  600

seq1  CGAAAATTACTACCTGAAGCTCTCTGTTGCCTGATATTCCCAAGAGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATTACTACCTGAAGCTCTCTGTTGCCTGATATTCCCAAGAGCACA  650

seq1  AACTCTGTAATTATAGTGTAGTTTTTCATACTTAATTTCTCTTCTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTAATTATAGTGTAGTTTTTCATACTTAATTTCTCTTCTAATAA  700

seq1  AATATATTGATGAAAAAGAGACCAAAGAGCTTATTTAATGGGATGGAATT  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATATATTGATGAAAAAGAGACCAAAGAGCTTATTTAATGAGATGGAATT  750

seq1  GAAATTTTTATATGCTGATATTACTATCTCCAACAAAACATTGCAATGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTTATATGCTGATATTACTATCTCCAACAAAACATTGCAATGAC  800

seq1  TTCCCTTCCTTGTAAGACTTGCTGCATGTGCATTTTTCCAGGTTTCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCCTTGTAAGACTTGCTGCATGTGCATTTTTCCAGGTTTCATCT  850

seq1  AACATTTTTGTTAATCAGCATTGTCTTCCTTTATAAATACATATAGATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTGTTAATCAGCATTGTCTTCCTTTATAAATACATATAGATGT  900

seq1  CATTAATATATCATCAAAGCATGCAGGTCAAAGCCAATACTTGTGTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATATATCATCAAAGCATGCAGGTCAAAGCCAATACTTGTGTTCAT  950

seq1  TATTATTGAAATAGAGACCATATACCATACTATATTGAAAAGGGATATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGAAATAGAGACCATATACCATACTATATTGAAAAGGGATATAT  1000

seq1  ACTTATGGGTCAGCATAAAATTCCTTTAGTATG-TTTTTATATGAAACAT  1049
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTTATGGGTCAGCATAAAATTCCTTTAGTATGTTTTTTATATGAAACAT  1050

seq1  A--TAAAATGTGTAACACAACATATGTGTAATACAACATTGAAAG-ACAT  1096
      |   ||||||||| |||||   ||||||| |||| ||| |||||| ||||
seq2  AATAAAAATGTGT-ACACACATTATGTGT-ATAC-ACA-TGAAAGAACAT  1096

seq1  ATT-GCTCCGTAGTAAT  1112
      ||| ||| |||||||||
seq2  ATTGGCTTCGTAGTAAT  1113