BAC Information

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BAC

Clone NameB6Ng01-346A15
Chromosome10 (Build37)
Map Location 122,477,180 - 122,642,850
singlet/doubletdoublet
Overlap geneMon2, Usp15, LOC100042958
Upstream geneSrgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h, D630033A02Rik
Downstream geneAI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346A15.bB6Ng01-346A15.g
ACCGA128055GA128056
length7221,147
definitionB6Ng01-346A15.b B6Ng01-346A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,642,129 - 122,642,850)(122,477,180 - 122,478,334)
sequence
gaattcttcatacagatttaacattgtggctcaggctttaatcccaacac
tcaataagtggaaggcagatcaacaggccaggttagactaggctacatgg
gtgcattccagccatgctggcctgataccaagaccatgtctcataatctc
ataaaagcaaaaacaaggcaaagcaagaaaaattcttcaccaaaaaaaaa
aaaaaaaaaatgagtaaagttatacttactattcattttaacactttcag
tatttggatgtccttttttttttttttttttttttttttttttttggttt
tacaaaaaaggatttctctgtgtagccctggctgtcctggaactctctct
gtaaaccaggctggcctccaactcaaaaatctgcctgcctctgcttccca
agtgctgggattaaaggggtgcgccacccccccccgggagttggatgtct
ttgaaatgatccattacttttctccccgattttaactaaaccgtttgcta
tgacataacaattttgtgggcttaatgaatataaatttgtctaaacattc
acattagtaaccgtccaaccgcgtattctgaggccctcaagtagcctcat
attcaggattgaattcagtttttgaacaagtatgaaatatcttcacttaa
aagaaatgaagccaaatcttccagtatcagaaaactagttacatagaaag
ggggatgtatatgattaaggaa
gaattccacagccaaacattagatggcgcctgggactcttatagaagagt
agggggaaagagataagaattcctcagaaagaccaacagagtcaactaac
ctggacccttgggggctctcagagtgtgaaccaccaaccaaagaacatac
atgggctggacctaggccccccccgcacatatgtagcagatgtgcagctt
gaccttcatgtgggtcccgaacaactgcagtgggggttgtcccaacagct
gttgccagtgtgggatgtgttcttttgctgggctgccctgtctggcctca
gtgggagaggatacacctagccttgcatcaacctgatgtgccagcgtggg
ggtacctggagggggcctccactctcttaaaggaaaagaggaaatgagat
gggggagggactatgagagggggtgaccaggaagggggacatcaactggg
atgtaaagagaaaacaacaaacaaacaaacaaacaaaaaagagtagtctc
actttagtgacaatatatggcttaagtctgtacttaataattaacttcca
atatattttattattttaaccattcagatttcattaagaccatgaaagaa
tcatttaaaaaaatcacccaacttaataatttaatgttacaggaaaataa
gcaagttatcggtaattaatttgctcagtaaatattaaaaacaaccaacc
aaacaaaaccagcaaactgccgtcactagcctcgtctcctggatctgagc
taacagtcaggtgtgctcttacggtttcgtcacatatattttaatgtatg
cgttaattctttccgtgtaaaaagggatagtgagagtgactgaaattttg
attctaatatttgtgtcagtttcttttattgccaaatgaaaactatgctt
gaggacatttgtgaaacctgtcgctctcactgtctgtgtgaggaaagcac
cttcctaagtgtgcagagcacactcaagtccactgggctcccacgctctc
accctctctttctccctgcacagcttcactttcattcagtattcacactg
attttactgactatgaaatcctatgacaaaaatgagggagaccacggtgt
cttgtttcaagtttgtaataaactcagttctcacacttgtgctattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122642129_122642850
seq2: B6Ng01-346A15.b_48_769 (reverse)

seq1  TTCCTTAATCATATACATCCCCCCTTCTATGT-ACTAGTTCTCTGATACT  49
      ||||||||||||||||||||||| |||||||| ||||||| |||||||||
seq2  TTCCTTAATCATATACATCCCCCTTTCTATGTAACTAGTTTTCTGATACT  50

seq1  GGAAGATTTGGCTTCATTTCTTTTAAGTGAAGATAACTTCATACTTGTTC  99
      |||||||||||||||||||||||||||||||||| | |||||||||||||
seq2  GGAAGATTTGGCTTCATTTCTTTTAAGTGAAGAT-ATTTCATACTTGTTC  99

seq1  AAAAACTGAATTCAATCCTGAATATGAGGCTACTTGAGGGCCTCAGAATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGAATTCAATCCTGAATATGAGGCTACTTGAGGGCCTCAGAATA  149

seq1  CGCGGTTGGACGGTTACTAATGTGAATGTTTAGACAAATTTATATTCATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGTTGGACGGTTACTAATGTGAATGTTTAGACAAATTTATATTCATT  199

seq1  AAGACCACAAAATTGTTATGTCATAGCAAACGGTTTAGTTAAAATCGAGG  249
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGCCCACAAAATTGTTATGTCATAGCAAACGGTTTAGTTAAAATCGGGG  249

seq1  AGAAAAGTAATGGATCATATCAAAGACATCCAACTGCCGGGCGGTGGTGG  299
      |||||||||||||||||| |||||||||||||||| ||||| || |||||
seq2  AGAAAAGTAATGGATCATTTCAAAGACATCCAACTCCCGGGGGGGGGTGG  299

seq1  CGCACGCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAGGCAGATTTCTG  349
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CGCACCCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAGGCAGATTTTTG  349

seq1  AGTTCGAGGCCAGCCTGGTCTACAGAGAGAGTTCCAGGACAGCCAGGGCT  399
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTTGGAGGCCAGCCTGGTTTACAGAGAGAGTTCCAGGACAGCCAGGGCT  399

seq1  ACACAGAGAAATCCTGTCTTGTAAAACCAAAAAAAAAAAAAAAAAAAAAA  449
      ||||||||||||||| | ||||||||||||||||||||||||||||||||
seq2  ACACAGAGAAATCCTTTTTTGTAAAACCAAAAAAAAAAAAAAAAAAAAAA  449

seq1  AAAAAAAAAAGGACATCCAAATACTGAAAGTGTTAAAATGAATAGTAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGGACATCCAAATACTGAAAGTGTTAAAATGAATAGTAAGT  499

seq1  ATAACTTTACTCATTTTTTTTTTTTTTTTTTTGGTGAAGAATTTTTCTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTACTCATTTTTTTTTTTTTTTTTTTGGTGAAGAATTTTTCTTG  549

seq1  CTTTGCCTTGTTTTTGCTTTTATGAGATTATGAGACATGGTCTTGGTATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTTGTTTTTGCTTTTATGAGATTATGAGACATGGTCTTGGTATC  599

seq1  AGGCCAGCATGGCTGGAATGCACCCATGTAGCCTAGTCTAACCTGGCCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCATGGCTGGAATGCACCCATGTAGCCTAGTCTAACCTGGCCTG  649

seq1  TTGATCTGCCTTCCACTTATTGAGTGTTGGGATTAAAGCCTGAGCCACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGCCTTCCACTTATTGAGTGTTGGGATTAAAGCCTGAGCCACAA  699

seq1  TGTTAAATCTGTATGAAGAATTC  722
      |||||||||||||||||||||||
seq2  TGTTAAATCTGTATGAAGAATTC  722

seq1: chr10_122477180_122478334
seq2: B6Ng01-346A15.g_66_1212

seq1  GAATTCCACAGCCAAACATTAGATGGCGCCTGGGACTCTTATAGAAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGCCAAACATTAGATGGCGCCTGGGACTCTTATAGAAGAGT  50

seq1  AGGGGGAAAGAGATAAGAATTCCTCAGAAAGACCAACAGAGTCAACTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAAGAGATAAGAATTCCTCAGAAAGACCAACAGAGTCAACTAAC  100

seq1  CTGGACCCTTGGGGGCTCTCAGAGTGTGAACCACCAACCAAAGAACATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCCTTGGGGGCTCTCAGAGTGTGAACCACCAACCAAAGAACATAC  150

seq1  ATGGGCTGGACCTAGGCCCCCCCCGCACATATGTAGCAGATGTGCAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGGACCTAGGCCCCCCCCGCACATATGTAGCAGATGTGCAGCTT  200

seq1  GACCTTCATGTGGGTCCCGAACAACTGCAGTGGGGGTTGTCCCAACAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCATGTGGGTCCCGAACAACTGCAGTGGGGGTTGTCCCAACAGCT  250

seq1  GTTGCCAGTGTGGGATGTGTTCTTTTGCTGGGCTGCCCTGTCTGGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAGTGTGGGATGTGTTCTTTTGCTGGGCTGCCCTGTCTGGCCTCA  300

seq1  GTGGGAGAGGATACACCTAGCCTTGCATCAACCTGATGTGCCAGCGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGAGGATACACCTAGCCTTGCATCAACCTGATGTGCCAGCGTGGG  350

seq1  GGTACCTGGAGGGGGCCTCCACTCTCTTAAAGGAAAAGAGGAAATGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTGGAGGGGGCCTCCACTCTCTTAAAGGAAAAGAGGAAATGAGAT  400

seq1  GGGGGAGGGACTATGAGAGGGGGTGACCAGGAAGGGGGACATCAACTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGGACTATGAGAGGGGGTGACCAGGAAGGGGGACATCAACTGGG  450

seq1  ATGTAAAGAGAAAACAACAAACAAACAAACAAACAAAAAAGAGTAGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGAGAAAACAACAAACAAACAAACAAACAAAAAAGAGTAGTCTC  500

seq1  ACTTTAGTGACAATATATGGCTTAAGTCTGTACTTAATAATTAACTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGTGACAATATATGGCTTAAGTCTGTACTTAATAATTAACTTCCA  550

seq1  ATATATTTTATTATTTTAACCATTCAGATTTCATTAAGACCATGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTATTATTTTAACCATTCAGATTTCATTAAGACCATGAAAGAA  600

seq1  TCATTTAAAAAAATCACCCAACTTAATAATTTAATGTTACAGGAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAAAAAATCACCCAACTTAATAATTTAATGTTACAGGAAAATAA  650

seq1  GCAAGTTATCGGTAATTAATTTGCTCAGTAAATATTAAAAACAACCAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTATCGGTAATTAATTTGCTCAGTAAATATTAAAAACAACCAACC  700

seq1  AAACAAAACCAGCAAACTGCCGTCACTAGCCTCGTCTCCTGGATCTGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACCAGCAAACTGCCGTCACTAGCCTCGTCTCCTGGATCTGAGC  750

seq1  TAACAGTCAGGTGTGCTCTTACGGTTTCGTCACATATATTTTAATGTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCAGGTGTGCTCTTACGGTTTCGTCACATATATTTTAATGTATG  800

seq1  CGTTAATTCTTTCCGTGTAAAAAGGGATAGTGAGAGTGACTGAAATTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAATTCTTTCCGTGTAAAAAGGGATAGTGAGAGTGACTGAAATTTTG  850

seq1  ATTCTAATATTTGTGTCAGTTTCTTTTATTGCCAAATGAAAACTATGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATATTTGTGTCAGTTTCTTTTATTGCCAAATGAAAACTATGCTT  900

seq1  GAGGACATTTGTGAAACCTGTCGCTCTCACTGTCTGTGTGAGGAAAGCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATTTGTGAAACCTGTCGCTCTCACTGTCTGTGTGAGGAAAGCAC  950

seq1  CTTCCTAAGTGTGCAGAGCACACTCAAGTCCACTGGGCTCCCACGCTCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTCCTAAGTGTGCAGAGCACACTCAAGTCCACTGGGCTCCCACGCTCT-  999

seq1  CACCCTCCTCTTTCTCCCTGCACAGCTTCCACTTTCATTCAGTATTCACA  1050
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  CACCCT-CTCTTTCTCCCTGCACAGCTT-CACTTTCATTCAGTATTCACA  1047

seq1  CCTGATTTTACCTGACTATGAAATCCTATGGACAAAAAATGAGGGAGA-C  1099
       ||||||||| |||||||||||||||||| ||| |||||||||||||| |
seq2  -CTGATTTTA-CTGACTATGAAATCCTAT-GAC-AAAAATGAGGGAGACC  1093

seq1  ACGGTGTCTGTTTTCCAAAATTTGGTATAAACTCAG-TCTCACAACTTGT  1148
      |||||||||  ||||  || ||||  |||||||||| |||||| ||||||
seq2  ACGGTGTCTTGTTTC--AAGTTTGTAATAAACTCAGTTCTCAC-ACTTGT  1140

seq1  GCTATTT  1155
      |||||||
seq2  GCTATTT  1147