BAC Information

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BAC

Clone NameB6Ng01-346B15
Chromosome10 (Build37)
Map Location 92,634,624 - 92,760,821
singlet/doubletdoublet
Overlap geneEG667314, Pctk2, Elk3
Upstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
Downstream geneLOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346B15.bB6Ng01-346B15.g
ACCGA128100GA128101
length9211,105
definitionB6Ng01-346B15.b B6Ng01-346B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,634,624 - 92,635,545)(92,759,704 - 92,760,821)
sequence
gaattcttttttttagaaactacttttattttcttccaaagtgtggcttt
tttgttttgttttgtttttaaactggagacaattatttttgctaatccat
ctactttttatttcaccttttaaaattattggtgccttatatcttccaat
ctggtatgttaagacactcattccacataatcttttgatgttcttacata
ggtttttttttattgtccatttataaatggaaggcaaaaaaaaaaaagtg
tagactgaagggtggtatgaatgtttatggaaaaaagactgcagtttctc
ctcagctccgaggatgttgatctgtaattttattttcaaaactgtctttt
tattatcaaatttgtactctaagtatgtctgctatcagtaagagttgctt
caggattggagcattctttcttttacttattttctaggtataactatttc
aagaatacctcagtaaaacattagtggtttccttagggaaaagaagccct
tgctgggggcaaaggaacattcgcatgggaccggctagggagctggttca
gtcagtacattgccttgcatgcatgtaaaaaaagaaaggtagcaatgaga
gaaaggattttatgtcctttttaaaatatgagctgacatctcttctgggc
cttttcagaaagataaatttcaaaaatatgggctgaggacattggtttgg
ttgctaaagcacttaatgcaagttcaacccccggagttcacataagaaag
ttggcatgatggcatgcacttagagtgacagggggattcctggggctctg
taataagccaggctaggctgctgggaaactccagacctgagagagtctcc
ttctccatagatagatagatagatagatagatagatagatagatagatag
atagatagatagatgatagat
gaattcctacctttttgcctcaggagtttccccttcccagaaagtcgcct
ctgcaacataatagaaggaagtcctgatttagaaaggtttcacagtttca
tcgacacaatgagagagctggaggatgctctggcaggaagcgccccagtt
gctggatgtggaaaaaccaccatcattgtgtgtcctgcagaagtgttctc
agcgtgctcggggcttgtgggtttttttttttttttttacttctaccagt
tgcctctttagcacaaagagtgttcaagtttatctgaaagattccagttt
tctgtctcttagaaggaagattgctttgatttttttttcttctcgtaaaa
ccatcttcaagtatcaaagtgaataaaccattcctaatcttaaatcaagc
atagatgttccagtgtttctccccgaattcacaagattgaatttactaac
attataagctagaacatttgggggaaaggtctgccaatccagccaaggtc
tctgaaatacacggatagaatgctgtgggaaggagtgctcactgctctct
acggaagctcagctcaaagaccgctggcaagatttgagtaagataaattg
tctgtgtctgtgtgatggaaagtcaccaaggatgctctgggtgccaggtc
ccttccaggggctgccacacacaggtcagaaactcccaggctgctgctct
ccccagaaggaacaattctcaggaatcatttctgagtactatgcaaacgt
ccatggggggtccggtgggggataggtttccacttccgtcttcaggttcc
ataatccttgcgtccacacggtcaaataaaaggaccagtccctccatgtc
tgagttctggaattcacagaggcttatgtgctgagttttccattaagagc
caacctcaagctaggcctggtgacacaggcctgaaatcccagctactcag
aaggctgtgacaggtacaaacttgaccttgcaagttcaggtcactcagag
tctgtagagattcagatcagctgcactacctcagattttgactcaaaatt
aaaagtgacagagctatcaacaggtggtgtcagtgcgactctagattcaa
taccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_92634624_92635545
seq2: B6Ng01-346B15.b_44_964

seq1  GAATTCTTTTTTTTAGAAACTACTTTTATTTTCTTCCAAAGTGTGGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTAGAAACTACTTTTATTTTCTTCCAAAGTGTGGCTTT  50

seq1  TTTGTTTTGTTTTGTTTTTAAACTGGAGACAATTATTTTTGCTAATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTTAAACTGGAGACAATTATTTTTGCTAATCCAT  100

seq1  CTACTTTTTATTTCACCTTTTAAAATTATTGGTGCCTTATATCTTCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTTATTTCACCTTTTAAAATTATTGGTGCCTTATATCTTCCAAT  150

seq1  CTGGTATGTTAAGACACTCATTCCACATAATCTTTTGATGTTCTTACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATGTTAAGACACTCATTCCACATAATCTTTTGATGTTCTTACATA  200

seq1  GGTTTTTTTTTATTGTCCATTTATAAATGGAAGGCAAAAAAAAAAAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTATTGTCCATTTATAAATGGAAGGCAAAAAAAAAAAAGTG  250

seq1  TAGACTGAAGGGTGGTATGAATGTTTATGGAAAAAAGACTGCAGTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGAAGGGTGGTATGAATGTTTATGGAAAAAAGACTGCAGTTTCTC  300

seq1  CTCAGCTCCGAGGATGTTGATCTGTAATTTTATTTTCAAAACTGTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCCGAGGATGTTGATCTGTAATTTTATTTTCAAAACTGTCTTTT  350

seq1  TATTATCAAATTTGTACTCTAAGTATGTCTGCTATCAGTAAGAGTTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCAAATTTGTACTCTAAGTATGTCTGCTATCAGTAAGAGTTGCTT  400

seq1  CAGGATTGGAGCATTCTTTCTTTTACTTATTTTCTAGGTATAACTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTGGAGCATTCTTTCTTTTACTTATTTTCTAGGTATAACTATTTC  450

seq1  AAGAATACCTCAGTAAAACATTAGTGGTTTCCTTAGGGAAAAGAAGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATACCTCAGTAAAACATTAGTGGTTTCCTTAGGGAAAAGAAGCCCT  500

seq1  TGCTGGGGGCAAAGGAACATTCGCATGGGACCGGCTAGGGAGCTGGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGGCAAAGGAACATTCGCATGGGACCGGCTAGGGAGCTGGTTCA  550

seq1  GTCAGTACATTGCCTTGCATGCATGTAAAAAAAGAAAGGTAGCAATGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTACATTGCCTTGCATGCATGTAAAAAAAGAAAGGTAGCAATGAGA  600

seq1  GAAAGGATTTTATGTCCTTTTTAAAATATGAGCTGACATCTCTTCTGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATTTTATGTCCTTTTTAAAATATGAGCTGACATCTCTTCTGGGC  650

seq1  CTTTTCAGAAAGATAAATTTCAAAAATATGGGCTGAGGACATTGGTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGAAAGATAAATTTCAAAAATATGGGCTGAGGACATTGGTTTGG  700

seq1  TTGCTAAAGCACTTAATGCAAGTTCAACCCCCGGAGTTCACATAAGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAAGCACTTAATGCAAGTTCAACCCCCGGAGTTCACATAAGAAAG  750

seq1  TTGGCATGATGGCATGCACTTAGAGTGACAGGGGGATTCCTGGGGCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGATGGCATGCACTTAGAGTGACAGGGGGATTCCTGGGGCTCTG  800

seq1  TAATAAGCCAGGCTAGGCTGCTGGGAAACTCCAGACCTGAGAGAGTCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGCCAGGCTAGGCTGCTGGGAAACTCCAGACCTGAGAGAGTCTCC  850

seq1  TTCTCCATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  900

seq1  ATAGATAGATAGATAGATAGAT  922
      |||||||||||||| |||||||
seq2  ATAGATAGATAGAT-GATAGAT  921

seq1: chr10_92759704_92760821
seq2: B6Ng01-346B15.g_69_1173 (reverse)

seq1  GGGTATTGAATCTAGGAGTCGCACTGGACCAACAACTGTTGATAGCTCTG  50
      |||||||||||||| |||||||||||   || || |||||||||||||||
seq2  GGGTATTGAATCTA-GAGTCGCACTG--ACACCACCTGTTGATAGCTCTG  47

seq1  TTCACTTTTTAAATTTTTGAGTCAAAATCTGAGTAAGGTGCAGGCTGATC  100
       ||||||||   | |||||||||||||||||||  | ||||| |||||| 
seq2  -TCACTTTT---AATTTTGAGTCAAAATCTGAGGTA-GTGCA-GCTGAT-  90

seq1  CTGAATTCTCTACAGACTCTGAGTTGACCTTGAACTTGCAAGGTTCAAGT  150
      ||||| ||||||||||||||||| ||||| ||||||||||||| ||||||
seq2  CTGAA-TCTCTACAGACTCTGAG-TGACC-TGAACTTGCAAGG-TCAAGT  136

seq1  TTGTACCTGTCACAGCCTTCTGAGTAGCTGGGATTTCAGGCCTGTGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCTGTCACAGCCTTCTGAGTAGCTGGGATTTCAGGCCTGTGTCAC  186

seq1  CAGGCCTAGCTTGAGGTTGGCTCTTAATGGAAAACTCAGCACATAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTAGCTTGAGGTTGGCTCTTAATGGAAAACTCAGCACATAAGCCT  236

seq1  CTGTGAATTCCAGAACTCAGACATGGAGGGACTGGTCCTTTTATTTGA-C  299
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGTGAATTCCAGAACTCAGACATGGAGGGACTGGTCCTTTTATTTGACC  286

seq1  GTGTGGACGCAAGGATTATGGAACCTGAAGACGGAAGTGGAAACCTATCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGACGCAAGGATTATGGAACCTGAAGACGGAAGTGGAAACCTATCC  336

seq1  CCCACCGGACCCCCCATGGACGTTTGCATAGTACTCAGAAATGATTCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCGGACCCCCCATGGACGTTTGCATAGTACTCAGAAATGATTCCTG  386

seq1  AGAATTGTTCCTTCTGGGGAGAGCAGCAGCCTGGGAGTTTCTGACCTGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGTTCCTTCTGGGGAGAGCAGCAGCCTGGGAGTTTCTGACCTGTG  436

seq1  TGTGGCAGCCCCTGGAAGGGACCTGGCACCCAGAGCATCCTTGGTGACTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAGCCCCTGGAAGGGACCTGGCACCCAGAGCATCCTTGGTGACTT  486

seq1  TCCATCACACAGACACAGACAATTTATCTTACTCAAATCTTGCCAGCGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACACAGACACAGACAATTTATCTTACTCAAATCTTGCCAGCGGT  536

seq1  CTTTGAGCTGAGCTTCCGTAGAGAGCAGTGAGCACTCCTTCCCACAGCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGCTGAGCTTCCGTAGAGAGCAGTGAGCACTCCTTCCCACAGCAT  586

seq1  TCTATCCGTGTATTTCAGAGACCTTGGCTGGATTGGCAGACCTTTCCCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCGTGTATTTCAGAGACCTTGGCTGGATTGGCAGACCTTTCCCCC  636

seq1  AAATGTTCTAGCTTATAATGTTAGTAAATTCAATCTTGTGAATTCGGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCTAGCTTATAATGTTAGTAAATTCAATCTTGTGAATTCGGGGA  686

seq1  GAAACACTGGAACATCTATGCTTGATTTAAGATTAGGAATGGTTTATTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTGGAACATCTATGCTTGATTTAAGATTAGGAATGGTTTATTCA  736

seq1  CTTTGATACTTGAAGATGGTTTTACGAGAAGAAAAAAAAATCAAAGCAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATACTTGAAGATGGTTTTACGAGAAGAAAAAAAAATCAAAGCAAT  786

seq1  CTTCCTTCTAAGAGACAGAAAACTGGAATCTTTCAGATAAACTTGAACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTAAGAGACAGAAAACTGGAATCTTTCAGATAAACTTGAACAC  836

seq1  TCTTTGTGCTAAAGAGGCAACTGGTAGAAGTAAAAAAAAAAAAAAAAACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGCTAAAGAGGCAACTGGTAGAAGTAAAAAAAAAAAAAAAAACC  886

seq1  CACAAGCCCCGAGCACGCTGAGAACACTTCTGCAGGACACACAATGATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCCCCGAGCACGCTGAGAACACTTCTGCAGGACACACAATGATGG  936

seq1  TGGTTTTTCCACATCCAGCAACTGGGGCGCTTCCTGCCAGAGCATCCTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTCCACATCCAGCAACTGGGGCGCTTCCTGCCAGAGCATCCTCC  986

seq1  AGCTCTCTCATTGTGTCGATGAAACTGTGAAACCTTTCTAAATCAGGACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTCATTGTGTCGATGAAACTGTGAAACCTTTCTAAATCAGGACT  1036

seq1  TCCTTCTATTATGTTGCAGAGGCGACTTTCTGGGAAGGGGAAACTCCTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTATTATGTTGCAGAGGCGACTTTCTGGGAAGGGGAAACTCCTGA  1086

seq1  GGCAAAAAGGTAGGAATTC  1118
      |||||||||||||||||||
seq2  GGCAAAAAGGTAGGAATTC  1105