BAC Information

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BAC

Clone NameB6Ng01-346C23
Chromosome10 (Build37)
Map Location 119,398,392 - 119,559,447
singlet/doubletdoublet
Overlap geneGrip1, Helb
Upstream geneLOC100042861, LOC674417, Cand1
Downstream geneIrak3, Tmbim4, 1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346C23.bB6Ng01-346C23.g
ACCGA128154GA128155
length1,0361,163
definitionB6Ng01-346C23.b B6Ng01-346C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,558,411 - 119,559,447)(119,398,392 - 119,399,560)
sequence
gaattcttcctcacgtcactcctcaatgatcatgaacacctgtagtgatc
caatgttgatcatcgctatgactttgaacgttcactacgtgccagctacc
gtgacacacgcacctcccttaacctttccttccctaggctcacgaggcac
tgtcacccccaggcaggatatcaggaaaccaagtgaggctccctgaggtc
ccggctctaaggtttatactttgagaccttgcggactatattctttccct
atggctgcctatgtttcaatgtcttctgaaactttaccacccccctcccc
ctgaggaggccaggaagctctgtatctaactcttaccgtaagcttactct
ctaaaacactttctgcaagtctttcaagtccttctctgaaatgtgggacc
aactgagactgacagagtgttgggttcaggggttggctcaatcatctatg
gacttgtaaggggtgtagcctctgtttctctcctttggtgtgctctctaa
ccctctgtgccatgggtgggttgaccagatgttttggagacattctatgt
ctatctgtattctctctctctctctctctctctctttctctctctctctc
tctctgcaggttcgaggggtaacctttccatctagtctcccactgacaaa
cgcagtattaaacttagggtcatattggcctgggaaagcttacattgtta
tagagagatcctataaacgactaactatactcgtggaccttacacacccg
agaaagactgggagaggggtatcataactgtgatggctattcttggcagt
tagctagacagagtcttgaatgaactaaaaatgcaagtggctcagtgcac
ctggaagcttttcttaattattatttgaactgggaaaatccacttaaatt
cggatcttttggagatgggaagatccaccttaaatctgggcttttttggt
aactatatcatggcattggagatgacccttgtgttccttgccttcttgcc
ttcactttgactgcaaagtccactccttcactggca
gaattccatcactgcagcccacagatggaaggaaagaacctactcctcca
agccgtcctttgacgtatatatgtatgccatcatacacacacacacagag
acacatacacacacatacacacacggagagtgaatacatgaaacagacag
gcagacagacagatttttgcagaagacaaagtggacattgccccaaaagc
aagactagagcttgacctctgacctccacatgcacgggcatatccatgca
cagcatctgtgtgtgcaatgcatgtacacctctggtgctcaacacacaca
catacacacacacacacacacacacacacacacacacacttctgacagtt
cccgaggaaactgtcttgctaagtggttgctactcatttgtcttatttta
gatcgactctcagccatctagcatgtgctgacttctgaccataaacatac
agcccagtgtagctgaggatacctgagccagttcacaaggcctttgagcc
attaactctcccgggaggacctgaccttctctcgcagtcttaggaagctg
agcttcctaagcactgagaactattttcaggtcggcagacacttgctctt
acgttagcggtttctctgcctccgcagcgcctagtgggaacgtatccgtt
tcctggatggatggtttattgaactctggaaagcctgacagtgcctgttt
taaacctgaaaaggaatgtcagtgcctttggaaggacgataggctgtggt
ggtcgggcagtagctgtgagtaacatgccaggccagtttagcagctgggg
caagcatttttcacctttgaggtaaacagttctactttcccagtgtttag
ccctttcaatagcagtctgactgtccgcactctctgaagcaagagaaggt
atagccttgatttctctgaaaaaattttccccctgaagtctttacattag
cagtgaccatggaaataacctagaagttctgcagaaggacctagtgcatc
tgacagtataccaagtgcacatgcctgagctcagggctcttataaaatgt
tggggctgcttttcttttcgtttattttaagtaattttttttctttgtca
attagcgtacggaatgcctacaaacttatgctaggagtccctctctcgcc
tcttttccgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119558411_119559447
seq2: B6Ng01-346C23.b_45_1080 (reverse)

seq1  TGCCAGTGAAGGAGTGGACTTGCCGGTGAGAGTGAAGGCAAGAAGGCAAA  50
      |||||||||||||||||||||  | || | ||||||||||||||||||| 
seq2  TGCCAGTGAAGGAGTGGACTTTGCAGTCAAAGTGAAGGCAAGAAGGCAAG  50

seq1  GAACACAAGCGTCCTTCTTCCATGCCCTTGATATAGGCTACC-AAAAAGC  99
      ||||||||| || | ||| | ||| || ||||||| | |||| |||||||
seq2  GAACACAAGGGT-CATCTCCAATG-CCATGATATA-GTTACCAAAAAAGC  97

seq1  CCAGATTTAAGGTGGATCTTCCCATCTCCAAAAGATCCGAATTTAAGTGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTAAGGTGGATCTTCCCATCTCCAAAAGATCCGAATTTAAGTGG  147

seq1  ATTTTCCCAGTTCAAATAATAATTAAGAAAAGCTTCCAGGTGCACTGAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCAGTTCAAATAATAATTAAGAAAAGCTTCCAGGTGCACTGAGC  197

seq1  CACTTGCA-TTTTAGTTCATTCAAGACTCTGTCTAGCTAACTGCCAAGAA  248
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCATTTTTAGTTCATTCAAGACTCTGTCTAGCTAACTGCCAAGAA  247

seq1  TAGCCATCACAGTTATGATACCCCTCTCCCAGTCTTTCTCGGGTGTGTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATCACAGTTATGATACCCCTCTCCCAGTCTTTCTCGGGTGTGTAA  297

seq1  GGTCCACGAGTATAGTTAGTCGTTTATAGGATCTCTCTATAACAATGTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCACGAGTATAGTTAGTCGTTTATAGGATCTCTCTATAACAATGTAA  347

seq1  GCTTTCCCAGGCCAATATGACCCTAAGTTTAATACTGCGTTTGTCAGTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCCAGGCCAATATGACCCTAAGTTTAATACTGCGTTTGTCAGTGG  397

seq1  GAGACTAGATGGAAAGGTTACCCCTCGAACCTGCAGAGAGAGAGAGAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGATGGAAAGGTTACCCCTCGAACCTGCAGAGAGAGAGAGAGAG  447

seq1  AGAAAGAGAGAGAGAGAGAGAGAGAGAGAATACAGATAGACATAGAATGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGAGAGAGAGAGAGAGAGAGAGAATACAGATAGACATAGAATGT  497

seq1  CTCCAAAACATCTGGTCAACCCACCCATGGCACAGAGGGTTAGAGAGCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAACATCTGGTCAACCCACCCATGGCACAGAGGGTTAGAGAGCAC  547

seq1  ACCAAAGGAGAGAAACAGAGGCTACACCCCTTACAAGTCCATAGATGATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGAGAGAAACAGAGGCTACACCCCTTACAAGTCCATAGATGATT  597

seq1  GAGCCAACCCCTGAACCCAACACTCTGTCAGTCTCAGTTGGTCCCACATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAACCCCTGAACCCAACACTCTGTCAGTCTCAGTTGGTCCCACATT  647

seq1  TCAGAGAAGGACTTGAAAGACTTGCAGAAAGTGTTTTAGAGAGTAAGCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAGGACTTGAAAGACTTGCAGAAAGTGTTTTAGAGAGTAAGCTT  697

seq1  ACGGTAAGAGTTAGATACAGAGCTTCCTGGCCTCCTCAGGGGGAGGGGGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTAAGAGTTAGATACAGAGCTTCCTGGCCTCCTCAGGGGGAGGGGGG  747

seq1  TGGTAAAGTTTCAGAAGACATTGAAACATAGGCAGCCATAGGGAAAGAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGTTTCAGAAGACATTGAAACATAGGCAGCCATAGGGAAAGAAT  797

seq1  ATAGTCCGCAAGGTCTCAAAGTATAAACCTTAGAGCCGGGACCTCAGGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCGCAAGGTCTCAAAGTATAAACCTTAGAGCCGGGACCTCAGGGA  847

seq1  GCCTCACTTGGTTTCCTGATATCCTGCCTGGGGGTGACAGTGCCTCGTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTTGGTTTCCTGATATCCTGCCTGGGGGTGACAGTGCCTCGTGA  897

seq1  GCCTAGGGAAGGAAAGGTTAAGGGAGGTGCGTGTGTCACGGTAGCTGGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGGAAGGAAAGGTTAAGGGAGGTGCGTGTGTCACGGTAGCTGGCA  947

seq1  CGTAGTGAACGTTCAAAGTCATAGCGATGATCAACATTGGATCACTACAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTGAACGTTCAAAGTCATAGCGATGATCAACATTGGATCACTACAG  997

seq1  GTGTTCATGATCATTGAGGAGTGACGTGAGGAAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATGATCATTGAGGAGTGACGTGAGGAAGAATTC  1036

seq1: chr10_119398392_119399560
seq2: B6Ng01-346C23.g_64_1226

seq1  GAATTCCATCACTGCAGCCCACAGATGGAAGGAAAGAACCTACTCCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCACTGCAGCCCACAGATGGAAGGAAAGAACCTACTCCTCCA  50

seq1  AGCCGTCCTTTGACGTATATATGTATGCCATCATACACACACACACAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTCCTTTGACGTATATATGTATGCCATCATACACACACACACAGAG  100

seq1  ACACATACACACACATACACACACGGAGAGTGAATACATGAAACAGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACATACACACACGGAGAGTGAATACATGAAACAGACAG  150

seq1  GCAGACAGACAGATTTTTGCAGAAGACAAAGTGGACATTGCCCCAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAGACAGATTTTTGCAGAAGACAAAGTGGACATTGCCCCAAAAGC  200

seq1  AAGACTAGAGCTTGACCTCTGACCTCCACATGCACGGGCATATCCATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAGAGCTTGACCTCTGACCTCCACATGCACGGGCATATCCATGCA  250

seq1  CAGCATCTGTGTGTGCAATGCATGTACACCTCTGGTGCTCAACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTGTGTGTGCAATGCATGTACACCTCTGGTGCTCAACACACACA  300

seq1  CATACACACACACACACACACACACACACACACACACACTTCTGACAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACACACACACACACACACACACACACACACACACTTCTGACAGTT  350

seq1  CCCGAGGAAACTGTCTTGCTAAGTGGTTGCTACTCATTTGTCTTATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGGAAACTGTCTTGCTAAGTGGTTGCTACTCATTTGTCTTATTTTA  400

seq1  GATCGACTCTCAGCCATCTAGCATGTGCTGACTTCTGACCATAAACATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGACTCTCAGCCATCTAGCATGTGCTGACTTCTGACCATAAACATAC  450

seq1  AGCCCAGTGTAGCTGAGGATACCTGAGCCAGTTCACAAGGCCTTTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGTGTAGCTGAGGATACCTGAGCCAGTTCACAAGGCCTTTGAGCC  500

seq1  ATTAACTCTCCCGGGAGGACCTGACCTTCTCTCGCAGTCTTAGGAAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTCTCCCGGGAGGACCTGACCTTCTCTCGCAGTCTTAGGAAGCTG  550

seq1  AGCTTCCTAAGCACTGAGAACTATTTTCAGGTCGGCAGACACTTGCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTAAGCACTGAGAACTATTTTCAGGTCGGCAGACACTTGCTCTT  600

seq1  ACGTTAGCGGTTTCTCTGCCTCCGCAGCGCCTAGTGGGAACGTATCCGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTAGCGGTTTCTCTGCCTCCGCAGCGCCTAGTGGGAACGTATCCGTT  650

seq1  TCCTGGATGGATGGTTTATTGAACTCTGGAAAGCCTGACAGTGCCTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATGGATGGTTTATTGAACTCTGGAAAGCCTGACAGTGCCTGTTT  700

seq1  TAAACCTGAAAAGGAATGTCAGTGCCTTTGGAAGGACGATAGGCTGTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGAAAAGGAATGTCAGTGCCTTTGGAAGGACGATAGGCTGTGGT  750

seq1  GGTCGGGCAGTAGCTGTGAGTAACATGCCAGGCCAGTTTAGCAGCTGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGGCAGTAGCTGTGAGTAACATGCCAGGCCAGTTTAGCAGCTGGGG  800

seq1  CAAGCATTTTTCACCTTTGAGGTAAACAGTTCTACTTTCCCAGTGTTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTTTTCACCTTTGAGGTAAACAGTTCTACTTTCCCAGTGTTTAG  850

seq1  CCCTTTCAATAGCAGTCTGACTGTCCGCACTCTCTGAAGCAAGAGAAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCAATAGCAGTCTGACTGTCCGCACTCTCTGAAGCAAGAGAAGGT  900

seq1  ATAGCCTTGATTTCTCTGAAAAAAATTTTCCCCCTGAAGTCTTTACATTA  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAGCCTTGATTTCTCTG-AAAAAATTTTCCCCCTGAAGTCTTTACATTA  949

seq1  GCAGTGACCATGGAAATAACCTAGAAGTTCTGCAGAAAGGACCTAGTGGC  1000
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  GCAGTGACCATGGAAATAACCTAGAAGTTCTGCAG-AAGGACCTAGT-GC  997

seq1  ATCTGACAGTATACCAAGTGCACATGCCTGAGCTCAGGGGCTCTTTATAA  1050
      |||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  ATCTGACAGTATACCAAGTGCACATGCCTGAGCTCA-GGGCTC-TTATAA  1045

seq1  AATGTTGGGGGCTGCTTTTCTTTTCCTTTATTTTAAAGTTAATTTTTTTT  1100
      |||||| |||||||||||||||||| ||||||||||   |||||||||||
seq2  AATGTT-GGGGCTGCTTTTCTTTTCGTTTATTTTAA--GTAATTTTTTTT  1092

seq1  CTTTGTCATTTAGCGGTACGGATGCCCTACAAACTTATGCTAGGAG---C  1147
      |||||||| ||||| |||||||   |||||||||||||||||||||   |
seq2  CTTTGTCAATTAGC-GTACGGAATGCCTACAAACTTATGCTAGGAGTCCC  1141

seq1  CCTCTCGCTCCTTTTCCGAAAG  1169
       |||||||  ||||||||||||
seq2  TCTCTCGCCTCTTTTCCGAAAG  1163