BAC Information

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BAC

Clone NameB6Ng01-346K23
Chromosome10 (Build37)
Map Location 129,370,778 - 129,371,927
singlet/doubletsinglet
Overlap genenone
Upstream geneItga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1
Downstream geneOlfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346K23.bB6Ng01-346K23.g
ACCGA128512GA128513
length1,1521,142
definitionB6Ng01-346K23.b B6Ng01-346K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttctttagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtctttggccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttcccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacacgataacaaccagttgtgccagtaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccatttg
tctacttatctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattactccttctaattcattgaagaattgtgttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttcccttagtcagagtaacgccgagatattttatatta
tttgtgactattgaaaagggtgttgtttcccttatttctttctcagcctg
tttattctttgtgtagaagaaagggcattgacttgttttgagttaatttt
attatccagcctactttcaccgaagctgtttatcagttagggtcctctgt
gaatttaggtcacttatattaccttcatattactcgtcaaaagggaatat
gt
gaattctcagtgtaactaggatccaaagatatgatttcctgggggattca
ccaattatataatacagaaatgatttttataaaaataacctcaatacaca
cacacacacatacaaacacacacactcacaaaaacctcttttactttctt
aaatcattgctttaagaggattgataatagatttctctactatttgaata
ttgtgacatgcttatggataaaattgtgattccataattctgtgttattt
caagtacatattgaaagtaaaaatgtaaggtgtaaaaagaatgtaatatg
taattgcaacactaaggagccaaagtcaagtggtactgtgttcaaggcaa
gtctgacctacattgtatgtttcagactagtttagtgaagatgcatggta
agaaccttaaattttaggctgatgtagaacaattgacttcaaaagatgtc
tactacactacgacattcttgtctcatttgcttaagaataaatcctatga
agcaaatcaatttattgacatatttagaatctgtattaaatggttcttta
ttgtgatgctgtgccatatagtacatttattttatttcttccatttaaaa
caagttttgaatttaaatgtattctgatcatattctttccctgtacattc
tcttatatatcagctaacagtttttctaattatgtattagcaaacatgtt
ccaattaataaaattatgcatattgtgatagtttgtatatacttggccca
ggaagtggcactatttggaggtatggccttgttgaaggaagtgtattact
gtgggcatgggcttaagaccctcatcttagctgcctggaaactagtcttc
tagctgccttgggaacaagttatagaattttcagctcctcctggaccatg
tgtcctcagatgttgctatgcttccaccttaatgaaatggactgaagctc
ttaacctgtaagccagccccaattaaatgttgtccccataagagttgcct
tgggtcatggtatctgttaataaaagtagagcccttactagataacatac
attttacaaaaccagtttataatataagtttatagcctttttattctaga
tgatcctaagtgggaagtactgtaagaagctcagaatagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129370778_129371927
seq2: B6Ng01-346K23.g_66_1207

seq1  GAATTCTCAGTGTAACTAGGATCCAAAGATATGATTTCCTGGGGGATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTGTAACTAGGATCCAAAGATATGATTTCCTGGGGGATTCA  50

seq1  CCAATTATATAATACAGAAATGATTTTTATAAAAATAACCTCAATACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATATAATACAGAAATGATTTTTATAAAAATAACCTCAATACACA  100

seq1  CACACACACATACAAACACACACACTCACAAAAACCTCTTTTACTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATACAAACACACACACTCACAAAAACCTCTTTTACTTTCTT  150

seq1  AAATCATTGCTTTAAGAGGATTGATAATAGATTTCTCTACTATTTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTGCTTTAAGAGGATTGATAATAGATTTCTCTACTATTTGAATA  200

seq1  TTGTGACATGCTTATGGATAAAATTGTGATTCCATAATTCTGTGTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACATGCTTATGGATAAAATTGTGATTCCATAATTCTGTGTTATTT  250

seq1  CAAGTACATATTGAAAGTAAAAATGTAAGGTGTAAAAAGAATGTAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACATATTGAAAGTAAAAATGTAAGGTGTAAAAAGAATGTAATATG  300

seq1  TAATTGCAACACTAAGGAGCCAAAGTCAAGTGGTACTGTGTTCAAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCAACACTAAGGAGCCAAAGTCAAGTGGTACTGTGTTCAAGGCAA  350

seq1  GTCTGACCTACATTGTATGTTTCAGACTAGTTTAGTGAAGATGCATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACCTACATTGTATGTTTCAGACTAGTTTAGTGAAGATGCATGGTA  400

seq1  AGAACCTTAAATTTTAGGCTGATGTAGAACAATTGACTTCAAAAGATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTAAATTTTAGGCTGATGTAGAACAATTGACTTCAAAAGATGTC  450

seq1  TACTACACTACGACATTCTTGTCTCATTTGCTTAAGAATAAATCCTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACACTACGACATTCTTGTCTCATTTGCTTAAGAATAAATCCTATGA  500

seq1  AGCAAATCAATTTATTGACATATTTAGAATCTGTATTAAATGGTTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCAATTTATTGACATATTTAGAATCTGTATTAAATGGTTCTTTA  550

seq1  TTGTGATGCTGTGCCATATAGTACATTTATTTTATTTCTTCCATTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATGCTGTGCCATATAGTACATTTATTTTATTTCTTCCATTTAAAA  600

seq1  CAAGTTTTGAATTTAAATGTATTCTGATCATATTCTTTCCCTGTACATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTGAATTTAAATGTATTCTGATCATATTCTTTCCCTGTACATTC  650

seq1  TCTTATATATCAGCTAACAGTTTTTCTAATTATGTATTAGCAAACATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATATATCAGCTAACAGTTTTTCTAATTATGTATTAGCAAACATGTT  700

seq1  CCAATTAATAAAATTATGCATATTGTGATAGTTTGTATATACTTGGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAATAAAATTATGCATATTGTGATAGTTTGTATATACTTGGCCCA  750

seq1  GGAAGTGGCACTATTTGGAGGTATGGCCTTGTTGAAGGAAGTGTATTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGGCACTATTTGGAGGTATGGCCTTGTTGAAGGAAGTGTATTACT  800

seq1  GTGGGCATGGGCTTAAGACCCTCATCTTAGCTGCCTGGAAACTAGTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCATGGGCTTAAGACCCTCATCTTAGCTGCCTGGAAACTAGTCTTC  850

seq1  TAGCTGCCTTGGGAACAAGTTATAGAATTTTCAGCTCCTCCTGGACCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCCTTGGGAACAAGTTATAGAATTTTCAGCTCCTCCTGGACCATG  900

seq1  TGTCCTCAGATGTTGCTATGCTTCCACCTTAATGAAATGGACTGAAGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCAGATGTTGCTATGCTTCCACCTTAATGAAATGGACTGAAGCTC  950

seq1  TTAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCCCATAAGAGTTGCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCCCATAAGAGTTGCCT  1000

seq1  T-GGTCATGGTATCTGTTAATAAAAGTAGAGCCCTAACTAAGAT-ACATA  1048
      | ||||||||||||||||||||||||||||||||| ||| |||| |||||
seq2  TGGGTCATGGTATCTGTTAATAAAAGTAGAGCCCTTACT-AGATAACATA  1049

seq1  CATTTTACAAAACCCAGTTTTATAATATTAAAGTTTATAG-CTTTTTATT  1097
      |||||||||||| |||| ||||||||||  |||||||||| |||||||||
seq2  CATTTTACAAAA-CCAG-TTTATAATAT--AAGTTTATAGCCTTTTTATT  1095

seq1  CTTAGGATGAATTCCTTAAGT-GGAGTTACTGTAAAGGAAGCTCAGAATA  1146
      ||   |||||  ||| ||||| |||  ||||||||  |||||||||||||
seq2  CT--AGATGA--TCC-TAAGTGGGAAGTACTGTAA--GAAGCTCAGAATA  1138

seq1  GTTT  1150
      ||||
seq2  GTTT  1142