BAC Information

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BAC

Clone NameB6Ng01-346P05
Chromosome10 (Build37)
Map Location 15,378,427 - 15,379,468
singlet/doubletsinglet
Overlap geneLOC637043
Upstream geneVta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC100039492, LOC671439, LOC382457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346P05.bB6Ng01-346P05.g
ACCGA128704GA128705
length1,0401,188
definitionB6Ng01-346P05.b B6Ng01-346P05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcattgtgaagcatatcacctttctttcatcagtttttgattt
ctaagcaagtgcatcctatgtgttagcttggcttgaatgacagcctttca
tcattgaaatgagatccacattttagaatgcatttgaaatgccttcacca
actgacatctattgaatcttctcatttgagaaatgggttaaccacttgga
agtataacaactaaaataaataagagttgagagcctataaaagtttacaa
catgagaattggccttcttttatgtggagatactgttcttatcatttatt
ataaataaatatttttaaatagcagattttcaccatctgacatttcaaat
ctttataatttggaaatatggcatgttactgacctaggcctttctttttc
ttaaattacagttttgacactaagttttaatgattaatcattttatttta
ttggagaagaagtattgataaaataaatctgtaaaaataaatatgaatta
gagttgtatgagcactctgttaaccatatacattctttttacttaatgtg
gggaactatgacattttcctgggctacctaccttaagaggcatacatcat
aatttatttaggtcagatttcatggctcctggggaaatatgtgccttggt
ttctgaaaaaaactgaggcacttccccagagagtgaaacattcaggttct
gtatttatcttttttccctaaaagtcaaagaagcatatagatgtttgaca
gaacacttagtcttaagcattaattttgtaccttaaagcttacaagtatc
actatatcctggcaactaccatagtattgatcctggcagccaccattgta
ttctggttctgaggagggtatacaaagaggcattgtttgcagtaaccttg
tcctagactcagtcttatgtggtccctttcccagcctgggtttccttccc
attcactataatcagtaaacctagctcacagaaatggctgatgcttacac
tctctctctctctctttctctctctctctctctctctctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggtttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaattcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagtctgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtgggatgcccacagtcagctaatggatggatcacagggctccc
aatgagagctagaagaaagtacccagagctaaagggatctgcaccctata
gcgaacacatatgactacagtatccagagctctgactctagctgcatatg
tatcaaagatgctagtcgcattcacttgaagagagcccattgaaaccgca
cctttaattgcccagttacagctaacgcaaggcaaagagatgcttgctaa
tgggaaactggctgcgatatactcatagtacagtagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15378427_15379468
seq2: B6Ng01-346P05.b_46_1085 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGTTGTAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAG-TGTAAGCA  49

seq1  TCAGCCATTTCTGTGAGCTAGGTTTACCTGATTATAGTGAATGGGAAGGA  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAGCCATTTCTGTGAGCTAGGTTTA-CTGATTATAGTGAATGGGAAGGA  98

seq1  AACCCAGGCTGGGAAAGGGACCACATAAGACTGAGTCTAGGACAAGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGCTGGGAAAGGGACCACATAAGACTGAGTCTAGGACAAGGTTA  148

seq1  CTGCAAACAATGCCTCTTTGTATACCCTCCTCAGAACCAGAATACAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACAATGCCTCTTTGTATACCCTCCTCAGAACCAGAATACAATGG  198

seq1  TGGCTGCCAGGATCAATACTATGGTAGTTGCCAGGATATAGTGATACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCAGGATCAATACTATGGTAGTTGCCAGGATATAGTGATACTTG  248

seq1  TAAGCTTTAAGGTACAAAATTAATGCTTAAGACTAAGTGTTCTGTCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTTAAGGTACAAAATTAATGCTTAAGACTAAGTGTTCTGTCAAAC  298

seq1  ATCTATATGCTTCTTTGACTTTTAGGGAAAAAAGATAAATACAGAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATGCTTCTTTGACTTTTAGGGAAAAAAGATAAATACAGAACCTG  348

seq1  AATGTTTCACTCTCTGGGGAAGTGCCTCAGTTTTTTTCAGAAACCAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCACTCTCTGGGGAAGTGCCTCAGTTTTTTTCAGAAACCAAGGC  398

seq1  ACATATTTCCCCAGGAGCCATGAAATCTGACCTAAATAAATTATGATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTCCCCAGGAGCCATGAAATCTGACCTAAATAAATTATGATGTA  448

seq1  TGCCTCTTAAGGTAGGTAGCCCAGGAAAATGTCATAGTTCCCCACATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTAAGGTAGGTAGCCCAGGAAAATGTCATAGTTCCCCACATTAA  498

seq1  GTAAAAAGAATGTATATGGTTAACAGAGTGCTCATACAACTCTAATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAGAATGTATATGGTTAACAGAGTGCTCATACAACTCTAATTCAT  548

seq1  ATTTATTTTTACAGATTTATTTTATCAATACTTCTTCTCCAATAAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTTACAGATTTATTTTATCAATACTTCTTCTCCAATAAAATAA  598

seq1  AATGATTAATCATTAAAACTTAGTGTCAAAACTGTAATTTAAGAAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAATCATTAAAACTTAGTGTCAAAACTGTAATTTAAGAAAAAGA  648

seq1  AAGGCCTAGGTCAGTAACATGCCATATTTCCAAATTATAAAGATTTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTAGGTCAGTAACATGCCATATTTCCAAATTATAAAGATTTGAAA  698

seq1  TGTCAGATGGTGAAAATCTGCTATTTAAAAATATTTATTTATAATAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATGGTGAAAATCTGCTATTTAAAAATATTTATTTATAATAAATG  748

seq1  ATAAGAACAGTATCTCCACATAAAAGAAGGCCAATTCTCATGTTGTAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACAGTATCTCCACATAAAAGAAGGCCAATTCTCATGTTGTAAAC  798

seq1  TTTTATAGGCTCTCAACTCTTATTTATTTTAGTTGTTATACTTCCAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGGCTCTCAACTCTTATTTATTTTAGTTGTTATACTTCCAAGTG  848

seq1  GTTAACCCATTTCTCAAATGAGAAGATTCAATAGATGTCAGTTGGTGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCCATTTCTCAAATGAGAAGATTCAATAGATGTCAGTTGGTGAAG  898

seq1  GCATTTCAAATGCATTCTAAAATGTGGATCTCATTTCAATGATGAAAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCAAATGCATTCTAAAATGTGGATCTCATTTCAATGATGAAAGGC  948

seq1  TGTCATTCAAGCCAAGCTAACACATAGGATGCACTTGCTTAGAAATCAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTCAAGCCAAGCTAACACATAGGATGCACTTGCTTAGAAATCAAA  998

seq1  AACTGATGAAAGAAAGGTGATATGCTTCACAATGATGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGAAAGAAAGGTGATATGCTTCACAATGATGAATTC  1040