MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-347D06
Chromosome	10 (Build37)
Map Location	18,906,186 - 19,058,275
singlet/doublet	doublet
Overlap gene	EG637620
Upstream gene	LOC100039660, Ccdc28a, LOC627646, Nhsl1, Hebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5
Downstream gene	Olig3, Ifngr1, Il22ra2, Il20ra, Slc35d3, Pex7, Map3k5, Mtap7, EG621697, Bclaf1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039660 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ccdc28a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215814 MGI:2443508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627646 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins pseudo : _no_value

name	Nhsl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215819 MGI:106390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hebp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56016 MGI:1860084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627729 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627729 MGI:3647215
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	D10Bwg1379e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215821 MGI:106387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG237300 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237300 MGI:3644318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Perp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64058 MGI:1929938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfaip3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21929 MGI:1196377
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpi-rs5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382342 MGI:98803
definition	gene_synonym : Tpi-5 note : triosephosphate isomerase related sequence 5 pseudo : _no_value

name	EG637620 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637620 MGI:3646164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Olig3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94222 MGI:2149955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifngr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15979 MGI:107655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il22ra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237310 MGI:2665114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il20ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237313 MGI:3605069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35d3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76157 MGI:1923407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pex7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18634 MGI:1321392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map3k5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26408 MGI:1346876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtap7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17761 MGI:1328328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621697 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621697 MGI:3644747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 414 ESTs, 6 Proteins

name	Bclaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72567 MGI:1917580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100039660 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260647 GeneID:100039660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100039660 transcript_id : XM_001473279.1

name	Ccdc28a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354973 GeneID:215814 MGI:2443508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 28A transcript_id : NM_144820.3

name	Nhsl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378007 GeneID:215819 MGI:106390
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NHS-like 1 transcript_id : NM_173390.3

name	Hebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130701 GeneID:56016 MGI:1860084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heme binding protein 2 transcript_id : NM_019487.3

name	D10Bwg1379e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366196 GeneID:215821 MGI:106387
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed transcript_id : NM_001033258.2

name	EG237300 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343736 GeneID:237300 MGI:3644318
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG237300 transcript_id : NM_177706.3

name	Perp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388283 GeneID:64058 MGI:1929938
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PERP, TP53 apoptosis effector transcript_id : NM_022032.2

name	Tnfaip3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543879 GeneID:21929 MGI:1196377
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor, alpha-induced protein 3 transcript_id : NM_009397.2

name	Olig3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111118998 GeneID:94222 MGI:2149955
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oligodendrocyte transcription factor 3 transcript_id : NM_053008.2

name	Ifngr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154110 GeneID:15979 MGI:107655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon gamma receptor 1 transcript_id : NM_010511.2

name	Il22ra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378527 GeneID:237310 MGI:2665114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 22 receptor, alpha 2 transcript_id : NM_178258.5

name	Il20ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802697 GeneID:237313 MGI:3605069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 20 receptor, alpha transcript_id : NM_172786.2

name	Slc35d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387888 GeneID:76157 MGI:1923407
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member D3 transcript_id : NM_029529.2

name	Pex7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679282 GeneID:18634 MGI:1321392
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome biogenesis factor 7 transcript_id : NM_008822.1

name	Map3k5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68535001 GeneID:26408 MGI:1346876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase kinase 5 transcript_id : NM_008580.3

name	Mtap7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678947 GeneID:17761 MGI:1328328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 7 transcript_id : NM_008635.1

name	EG621697 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387932 GeneID:621697 MGI:3644747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 414 ESTs, 6 Proteins product : predicted gene, EG621697 transcript_id : XM_887384.2

name	Bclaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70906446 GeneID:72567 MGI:1917580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2-associated transcription factor 1 transcript_id : NM_001025392.1

name	Bclaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70906448 GeneID:72567 MGI:1917580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2-associated transcription factor 1 transcript_id : NM_001025393.1

name	Bclaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70906445 GeneID:72567 MGI:1917580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2-associated transcription factor 1 transcript_id : NM_153787.2

name	LOC100039660 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260648 GeneID:100039660
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473329.1

name	Ccdc28a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118150631 GeneID:215814 MGI:2443508
definition	codon_start : 1 product : coiled-coil domain containing 28A protein_id : NP_659069.2

name	Nhsl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378008 GeneID:215819 MGI:106390
definition	codon_start : 1 product : NHS-like 1 protein_id : NP_775566.3

name	Hebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507129 CCDS:CCDS23711.1 GeneID:56016 MGI:1860084
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] codon_start : 1 note : putative heme-binding protein product : heme binding protein 2 protein_id : NP_062360.1

name	D10Bwg1379e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701756 CCDS:CCDS23712.1 GeneID:215821 MGI:106387
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC215821 protein_id : NP_001028430.1

name	EG237300 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244156 GeneID:237300 MGI:3644318
definition	codon_start : 1 product : hypothetical protein LOC237300 protein_id : NP_808374.1

name	Perp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11528520 CCDS:CCDS23714.1 GeneID:64058 MGI:1929938
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IDA] codon_start : 1 note : p53 apoptosis-associated target product : p53 apoptosis effector related to Pmp22 protein_id : NP_071315.1

name	Tnfaip3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543880 CCDS:CCDS23715.1 GeneID:21929 MGI:1196377
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : tumor necrosis factor induced protein 3; zinc finger protein A20 product : tumor necrosis factor, alpha-induced protein 3 protein_id : NP_033423.2

name	Olig3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111118999 GeneID:94222 MGI:2149955
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : oligodendrocyte-specific bHLH transcription factor; basic helix-loop-helix domain-containing class B protein 7 product : oligodendrocyte transcription factor 3 protein_id : NP_443734.2

name	Ifngr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754306 GeneID:15979 MGI:107655
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0019955 - cytokine binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : INF-g receptor product : interferon gamma receptor 1 protein_id : NP_034641.1

name	Il22ra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51036631 CCDS:CCDS23717.1 GeneID:237310 MGI:2665114
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0042516 - regulation of tyrosine phosphorylation of Stat3 protein [Evidence IDA] codon_start : 1 note : cytokine receptor family II soluble 1 product : interleukin 22 receptor, alpha 2 protein_id : NP_839989.2

name	Il20ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370160 CCDS:CCDS23718.1 GeneID:237313 MGI:3605069
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA] codon_start : 1 product : interleukin 20 receptor, alpha protein_id : NP_766374.1

name	Slc35d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037439 CCDS:CCDS23719.1 GeneID:76157 MGI:1923407
definition	codon_start : 1 product : frc, fringe-like 1 protein_id : NP_083805.1

name	Pex7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679283 CCDS:CCDS23720.1 GeneID:18634 MGI:1321392
definition	GO_component : GO:0005777 - peroxisome [Evidence IEA] GO_process : GO:0001958 - endochondral ossification [Evidence IMP]; GO:0006635 - fatty acid beta-oxidation [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0006625 - protein targeting to peroxisome [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : peroxisome biogenesis factor 7 protein_id : NP_032848.1

name	Map3k5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68535002 GeneID:26408 MGI:1346876
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : MEK kinase 5 product : mitogen activated protein kinase kinase kinase 5 protein_id : NP_032606.3

name	Mtap7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678948 GeneID:17761 MGI:1328328
definition	GO_component : GO:0005875 - microtubule associated complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007017 - microtubule-based process [Evidence IEA]; GO:0006970 - response to osmotic stress [Evidence IPI] codon_start : 1 exception : mismatches in translation product : microtubule-associated protein 7 protein_id : NP_032661.1

name	EG621697 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932187 GeneID:621697 MGI:3644747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892477.1

name	Bclaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70906447 GeneID:72567 MGI:1917580
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : BCL2-associated transcription factor 1 isoform 1 protein_id : NP_001020563.1

name	Bclaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70906449 CCDS:CCDS23721.1 GeneID:72567 MGI:1917580
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : BCL2-associated transcription factor 1 isoform 3 protein_id : NP_001020564.1

name	Bclaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24496776 GeneID:72567 MGI:1917580
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : BCL2-associated transcription factor 1 isoform 2 protein_id : NP_722482.1

name	EG627729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627729
definition	number : 1 pseudo : _no_value

name	EG637620 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637620
definition	number : 1 pseudo : _no_value

name	LOC627646 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260649 GeneID:627646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : similar to ribosomal protein L27a pseudo : _no_value transcript_id : XR_031151.1

clone name	MSMg01-394K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-468B05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-326B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362G04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-140H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-347D06.b	B6Ng01-347D06.g
ACC	GA128875	GA128876
length	493	922
definition	B6Ng01-347D06.b	B6Ng01-347D06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(18,906,186 - 18,906,684)	(19,057,343 - 19,058,275)
sequence	ccacaccggctcctgactgtccaagccgacacacttccccttcaggatgg tttgagggaagaagagcctgtctgcacgtctgagagatttcaaagaacac tctgttcttatccttcagatctctgattgcttcatgggctttctgagagc gtgtgcagaggggagcttttacaccaaacaaaacagctcctgggtgtttg atgcctgatgcttctacgttctccagtgtctggatggtttgtctttgagt gaaaaaggacattgcattcccaccacttccattatcaaagaggctcagtt cattcacaaaaggaaattgatgcctaaataaagttaacagaattctatgt ttaaagggtttacactggaaaaaataatcacttagtggcaaatacaattt aactaattaggcaactatgtatacttgtgagatttatttcaagggaaatg aatggccatggttctgtggttctgtgtgtttgtgtgtgtgtgt	gaattctcatcctcaagaagaatgcatgaatccatccattcacaaataat aacttttgcaaacagactgtttgaggggttgtgggatatctgattaccaa ttttgagcgggttttccctgcacgctgcttttgactaattgcatttttca aaaaagaggacaaaataaaacaaaacccccaaagatttccaaattaacaa atttgtgagaaaagtgaaatacatgaagcaatttcataattagattaagg ggaaaggggaattcagttatctgaatggattttttccccacccagatgag cctgaaatattttcagggacccaccacaatcccactttattcggacagtc actacaattgatggtgcttttataagaggcaagtcaagtgctttgatttt tagaaaatcctcccccaaacaggctgattttaaaaatcttcattatctta gccaacataacttaatatgcatcaagcactattttacggactaacaaata ttaattcatcaaagcatcatagtagccatatggggtagatgctataaaat cttatacctcctctcttctgggggtaggacagattagcttgtcccaacac atgggccttgagaaatcccccccaagggttgtgtcccccccccccttgtg aaaaatggtataaggccgggtttttgtttacaaaaaaaaaaaaaaaaaaa atgatggacataaacgcactttcagggctttgttgcagatacgggaaaag cagaggagataagaaaggacacatcatctcgtacagattccacgcaatac tcatcttcgtgtgctgagtagctacataattctagaattaggaagctctt cctgaatggatgagtccacatttgtctaattctgatgtatggcctggaac ctaaggcagccctctctccccc
quality values	Open. Hide. 62 44 33 54 42 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 49 39 43 34 48 50 30 35 32 28 46 43 42 49 62 62 62 62 62 62 62 59 59 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 49 49 38 42 56 54 62 59 59 62 62 62 62 62 62 59 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 46 46 46 58 58 49 58 58 58 58 54 52 41 13	Open. Hide. 62 59 62 59 62 62 59 59 46 54 56 45 28 28 25 30 28 46 54 54 62 62 59 62 62 62 62 62 54 62 62 62 59 59 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 56 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 54 54 62 62 62 62 62 62 62 42 54 62 62 62 62 54 54 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 54 62 62 62 59 62 62 62 62 62 54 46 59 59 51 59 59 48 48 46 38 59 59 56 48 46 59 51 51 56 56 50 43 34 34 41 49 43 43 43 27 23 30 18 19 23 18 23 13 30 16 18 13 18 13 34 13 13 18 17 10 18 37 30 19 20 18 19 17 17 17 14 41 30 23 30 34 28 27 34 45 44 62 49 35 59 62 62 62 62 44 62 62 62 62 51 62 62 56 56 51 47 62 62 62 56 62 62 56 62 62 62 56 56 62 62 62 62 62 62 54 62 62 62 47 54 62 62 62 62 43 56 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 48 62 62 62 52 62 46 62 62 62 58 52 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 43 54 52 58 58 58 54 54 54 41 52 52 52 31 31 38 33 39 31 41 52 54 58 58 52 58 45 39 58 58 41 42 58 58 58 41 58 53 58 58 52 46 58 53 53 51 53 58 54 51 50 47 38 35 58 50 52 58 46 58 50 58 49 53 53 58 51 58 58 50 46 58 52 50 58 58 51 50 49 51 53 41 58 58 48 29 43 48 58 43 40 46 50 42 43 40 44 50 51 49 41 47 41 53 51 58 50 40 54 42 33 38 58 50 47 50 53 49 40 49 41 42 37 46 35 25 22 23 49 41 41 54 49 51 54 29 49 53 51 25 50 49 35 44 40 49 54 54 47 32 47 24 51 34 38 34 42 40 42 41 41 40 42 40 37 34 42 42 35 44 49 54 54 47 29 37 31 54 32 18 32 32 52 31 30 36 12 29 34 34 45 26 16 36 30 12 12 16 34 40 32 29 30 33 13 13 32 19 29 41 25 11 4 4 10 4 10 18 12 23 26 24 12 12 15 6 6 6 12 15 6 7 5 15 6 19 10 9 9 11 13 14 17 11 16 12 25 6 9 7 10 14 9 9 7 5 9 5 9 6 9 9 6 12 11 9 5 14 14 6 13 6 9 5 9 6 14 12 6 8 5 14 13 11 19 28 11 25 22 21 23 18 24 5 23 10 12 7 7 8 5 4 4 32 31 30 28 11 19 18 16 33 37 38 30 21 24 22 26 32 48 26 18 22 8 46 27 16 31 41 26 16 9 33 20 8 28 14 14 18 7 21 7 44 9 38 44 41 30 15 24 10 7 12 10 7 29 6 27 10 8 26 10 14 36 18 17 17 25 11 24 7 14 15 24 19 32 17 19 21 21 13 31 14 7 9 29 19 22 22 17 8 12 13 10 24 17 7 17 32 19 21 7 15 18 8 5 14 8 9 33 14 33 22 28 28 32 22 13 28 18 15 12 5 9 6 10 14 10 16 18 10 7 16 10 37 21 23 8 12 6 6 18 33 9 12 16 8 4 11 12 21 16 16 38 25 16 26 13 22 11 20 21 6 10 23 8 7 5 5 9 40 25 12 5 11 5 11 10 17 10 14 9 14 16 11 11 6 7 8 9 7 17 21 9 14 9 27 5 21 27 20 24 7 13 11 6 23 12 9 6 4 5 7 8 8 9 13 17 11 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_18906186_18906684
seq2: B6Ng01-347D06.b_48_546

seq1  GAATTCCCACACCGGCTCCTGACTGTCCAAGCCGACACACTTCCCCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACACCGGCTCCTGACTGTCCAAGCCGACACACTTCCCCTTCA  50

seq1  GGATGGTTTGAGGGAAGAAGAGCCTGTCTGCACGTCTGAGAGATTTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTTTGAGGGAAGAAGAGCCTGTCTGCACGTCTGAGAGATTTCAAA  100

seq1  GAACACTCTGTTCTTATCCTTCAGATCTCTGATTGCTTCATGGGCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTCTGTTCTTATCCTTCAGATCTCTGATTGCTTCATGGGCTTTCT  150

seq1  GAGAGCGTGTGCAGAGGGGAGCTTTTACACCAAACAAAACAGCTCCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCGTGTGCAGAGGGGAGCTTTTACACCAAACAAAACAGCTCCTGGG  200

seq1  TGTTTGATGCCTGATGCTTCTACGTTCTCCAGTGTCTGGATGGTTTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATGCCTGATGCTTCTACGTTCTCCAGTGTCTGGATGGTTTGTCT  250

seq1  TTGAGTGAAAAAGGACATTGCATTCCCACCACTTCCATTATCAAAGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGAAAAAGGACATTGCATTCCCACCACTTCCATTATCAAAGAGGC  300

seq1  TCAGTTCATTCACAAAAGGAAATTGATGCCTAAATAAAGTTAACAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCATTCACAAAAGGAAATTGATGCCTAAATAAAGTTAACAGAATT  350

seq1  CTATGTTTAAAGGGTTTACACTGGAAAAAATAATCACTTAGTGGCAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTAAAGGGTTTACACTGGAAAAAATAATCACTTAGTGGCAAATA  400

seq1  CAATTTAACTAATTAGGCAACTATGTATACTTGTGAGATTTATTTCAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAACTAATTAGGCAACTATGTATACTTGTGAGATTTATTTCAAGG  450

seq1  GAAATGAATGGCCATGGTTCTGTGGTTCTGTGTGTTTGTGTGTGTGTGT  499
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAATGGCCATGGTTCTGTGGTTCTGTGTGTTTGTGTGTGTGTGT  499

seq1: chr10_19057343_19058275
seq2: B6Ng01-347D06.g_69_990 (reverse)

seq1  GGGGGGGAGAGGCTTGCCTTAGGGTTCCAGGGCATACATCAGAATTAGAC  50
      ||||| ||||||  ||||||| ||||||||| ||||||||||||||||||
seq2  GGGGGAGAGAGGGCTGCCTTA-GGTTCCAGGCCATACATCAGAATTAGAC  49

seq1  AAAATGTGGACTTCATCCATTTCAGGAAGAGCTTTCTTAATTCTAGAAAT  100
       |||||||||| ||||||| |||||||||||| ||| ||||||||| |||
seq2  -AAATGTGGAC-TCATCCA-TTCAGGAAGAGC-TTCCTAATTCTAG-AAT  94

seq1  TATGTAGCTACTCAGCACACGGAGATGAGTATTTGCGTGGAATCTGTTAC  150
      ||||||||||||||||||||| ||||||||| |||||||||||||| |||
seq2  TATGTAGCTACTCAGCACACGAAGATGAGTA-TTGCGTGGAATCTG-TAC  142

seq1  GAGATGATGTTGTCCTTTCTTATCTTCCTTCTGCTTTTTCCGTATCTTGC  200
      ||||||||| |||||||||||||||  | ||||||||| ||||||| |||
seq2  GAGATGATG-TGTCCTTTCTTATCT--CCTCTGCTTTTCCCGTATC-TGC  188

seq1  AACAAAGCCCTTGAAAGTGCGTTTTATGTCCA-------TTCATCTGTTT  243
      |||||||||| |||||||||| ||||||||||       ||  | | |||
seq2  AACAAAGCCC-TGAAAGTGCG-TTTATGTCCATCATTTTTTTTTTTTTTT  236

seq1  CTGTTGTAAACTTGAGAAACAGTGGCCTATATAGCAATGTGTTCAAAACA  293
       | ||||||||   | ||||   ||||| |||| ||   | |||   |||
seq2  TTTTTGTAAAC---AAAAAC-CCGGCCT-TATACCA--TTTTTC---ACA  276

seq1  GGTGTGTTGGGAACAGAAGCATCTGGGAGGGA-TGCTCAAGGCCCATGTG  342
       | | |  ||| ||| || | | |||| |||| | |||||||||||||||
seq2  AGGGGGGGGGGGACACAACCCT-TGGGGGGGATTTCTCAAGGCCCATGTG  325

seq1  TTTGGGACAAGCTAATCTGTCCTACCCCCAGAAGAGAGGAGGTATAAGAT  392
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTGGGACAAGCTAATCTGTCCTACCCCCAGAAGAGAGGAGGTATAAGAT  374

seq1  TTTATAGCATCTACCCCATATGGCTACTATGATGCTTTGATGAATTAATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGCATCTACCCCATATGGCTACTATGATGCTTTGATGAATTAATA  424

seq1  TTTGTTAGTCCGTAAAATAGTGCTTGATGCATATTAAGTTATGTTGGCTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGTCCGTAAAATAGTGCTTGATGCATATTAAGTTATGTTGGCTA  474

seq1  AGATAATGAAGATTTTTAAAATCAGCCTGTTTGGGGGAGGATTTTCTAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGAAGATTTTTAAAATCAGCCTGTTTGGGGGAGGATTTTCTAAA  524

seq1  AATCAAAGCACTTGACTTGCCTCTTATAAAAGCACCATCAATTGTAGTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGCACTTGACTTGCCTCTTATAAAAGCACCATCAATTGTAGTGA  574

seq1  CTGTCCGAATAAAGTGGGATTGTGGTGGGTCCCTGAAAATATTTCAGGCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCGAATAAAGTGGGATTGTGGTGGGTCCCTGAAAATATTTCAGGCT  624

seq1  CATCTGGGTGGGGAAAAAATCCATTCAGATAACTGAA-------TTCCCC  685
      |||||||||||||||||||||||||||||||||||||       ||||||
seq2  CATCTGGGTGGGGAAAAAATCCATTCAGATAACTGAATTCCCCTTTCCCC  674

seq1  TTAATCTAATTATGAAATTGCTTCATGTATTTCACTTTTCTCACAAATTT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTAATTATGAAATTGCTTCATGTATTTCACTTTTCTCACAAATTT  724

seq1  GTTAATTTGGAAATCTTTGGGGGTTTTGTTTTATTTTGTCCTCTTTTTTG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTGGAAATCTTTGGGGGTTTTGTTTTATTTTGTCCTCTTTTTTG  774

seq1  AAAAATGCAATTAGTCAAAAGCAGCGTGCAGGGAAAACCCGCTCAAAATT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCAATTAGTCAAAAGCAGCGTGCAGGGAAAACCCGCTCAAAATT  824

seq1  GGTAATCAGATATCCCACAACCCCTCAAACAGTCTGTTTGCAAAAGTTAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATCAGATATCCCACAACCCCTCAAACAGTCTGTTTGCAAAAGTTAT  874

seq1  TATTTGTGAATGGATGGATTCATGCATTCTTCTTGAGGATGAGAATTC  933
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGAATGGATGGATTCATGCATTCTTCTTGAGGATGAGAATTC  922

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information