BAC Information

Click to search

BAC

Clone NameB6Ng01-347O19
Chromosome10 (Build37)
Map Location 5,471,900 - 5,472,306
singlet/doubletsinglet
Overlap geneEsr1
Upstream geneRgs17, Mtrf1l, Fbxo5, LOC666395, Vip, Myct1, Syne1
Downstream geneLOC100041310, Gm221, 1700052N19Rik, Rmnd1, Zbtb2, Akap12, Mthfd1l, Plekhg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347O19.bB6Ng01-347O19.g
ACCGA129378GA129379
length840400
definitionB6Ng01-347O19.b B6Ng01-347O19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttatgaatatctgaaagaattaaaatctgggttttgatgaa
atatttgtatagctatgttcatataacatttttcacaataactgaaagct
agaaatgacacacatacatatataaatatattatacatgtataaatgttt
aaaatatatattataatatatacaaatatattgacatacatacaaatatg
tatatttttatcaaaatatgataagtatatgctgtggtatattgttaagt
ttgaaaacggaaggaaattctagcgagtacatacctataatccataggtt
gaggatgtaggactatgtgtttgaggtcagcttgggctatataatgagtt
caaggtcattctgggatagagaactagaatctaaagaaacaaacaacagc
aacagctcatgcttttaatcagcaatcagaaagaaaaggtgggcctctga
ggtctgagacaaatgtctacttgtaatttagcagcgactcaagtcggtgt
tgaaaaaggagaattgacaagtaccagtcttggatgttgagaatagccct
aaatgaaacaacataataatttttttggaagttcaacctgcccacggaca
ttagatgcgaaactggaggaatatatttaaggggggttcagtgtgatatc
aaaacaaacggtgcttacagaactataaccgggctgttatgggaatttct
ttggttttattgaacccccaatttaacaataaatcaaccttttttgactt
gggtttgagacccccttgatccccccccccccttttttttttccaattaa
ctttcaaactaggttcttgaaagatgattcaattatcgta
catggtggccttatgaccacacagctgggaaccaaaatgccctgtgattt
ttcaatgcctgacttatttgggaaactagttgtctatatatttctgtttc
tttattcgtaaaatggcaataggagtagcaggaagcttcacatatgcttt
gaggataataaacaatacatggtagtctatgagcttactatggactctat
gggtgtttgtgtgtgtatgtgtgtgtgtgtgtgtgtttggcaggctcggg
acaacaagtgtcattcctcaggagccattgcattggttctcttgagttaa
gatttttctcacaggcctagaattcagccagtcagctaggctgtctggac
ttagacccttaaatctgcttgtctccactgcccctagctgagatacaagg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_5471900_5472306
seq2: B6Ng01-347O19.g_68_473

seq1  GAATTCCATGGTGGCCTTATGACCACACAGCTGGGAACCAAAATGCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTGGCCTTATGACCACACAGCTGGGAACCAAAATGCCCTG  50

seq1  TGATTTTTCAATGCCTGACTTATTTGGGAAACTAGTTGTCTATATATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTCAATGCCTGACTTATTTGGGAAACTAGTTGTCTATATATTTC  100

seq1  TGTTTCTTTATTCGTAAAATGGCAATAGGAGTAGCAGGAAGCTTCACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTTATTCGTAAAATGGCAATAGGAGTAGCAGGAAGCTTCACATA  150

seq1  TGCTTTGAGGATAATAAACAATACATGGTAGTCTATGAGCTTACTATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAGGATAATAAACAATACATGGTAGTCTATGAGCTTACTATGGA  200

seq1  CTCTATGGGTGTTTGTGTGTGTATGTGTGTGTGTGTGTGTGTTTGGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGGTGTTTGTGTGTGTATGTGTGTGTGTGTGTGTGTTTGGCAGG  250

seq1  CAGGGGACAACAAGTGTCATTCCTCAGGAGCCATTGCATTGGTTCTCTTG  300
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGACAACAAGTGTCATTCCTCAGGAGCCATTGCATTGGTTCTCTTG  300

seq1  AGTTAAGATCTCTCTCACAGGCCTAGAATTCAGCAAGTCAGCTAGGCTGG  350
      ||||||||| | |||||||||||||||||||||| |||||||||||||| 
seq2  AGTTAAGATTTTTCTCACAGGCCTAGAATTCAGCCAGTCAGCTAGGCTGT  350

seq1  CTGGACTTAGACCCTTAAATCTGCCTGTCTCCACTGCCCCGAGCTGAGAT  400
      |||||||||||||||||||||||| ||||||||||||||| |||||||| 
seq2  CTGGACTTAGACCCTTAAATCTGCTTGTCTCCACTGCCCCTAGCTGAGA-  399

seq1  TACAAGG  407
      |||||||
seq2  TACAAGG  406