BAC Information

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BAC

Clone NameB6Ng01-350N02
Chromosome10 (Build37)
Map Location 97,599,042 - 97,600,142
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1, Wdr51b, Galnt4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350N02.bB6Ng01-350N02.g
ACCGA131380GA131381
length1,2031,106
definitionB6Ng01-350N02.b B6Ng01-350N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaactcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgtagaaagaaattaaggaagatctcagaaaatggaaagatctcccatg
ctcctggattggcaggaacaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaataagccttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattatgataaaaactgta
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaacaggttgttatcgtgtagaagaatacgaatcgatccatacttatc
tccttgtactaagtcaaatctaagtggatcaggacttcacaataaaacca
gagacactgaaccttatagagagaaagtgggaaagctggaagattgggca
cagggaaaattctgaacggaacaggcattgcctgtgcattaagatcgaat
tgacatggcaacctaatgacttccagtctctgcaggcaaaggacacccgc
gct
gaattcctacacctggcccaggaagggaagttcattggctgactgctcag
gactgatgtcgatacctcgttagcatgggaaactccaggctcttattcga
cagtgactgattatcatggtcctctcagtggggtcgtggttacttgtccc
agagcaggtagaagcaggcaggaagtggtggtcccatttctactgttctc
gattctgagatttatggggtttgggctcactcaaccttaccaattcttct
gtctggtggcatggtccacttgcctttttgtttttataaacgagaggtgt
tgttgaagcatcagcttcctatcgtatctgtagttaaaattttcgatggg
gcatgtgtaagcatcaaaataaaacacaaggtaagccagaggagtagcaa
ggagtcacgaccaggcagacaagggataattgaaccaacttgatggatta
agatctccaaagcaagtctgtacagaaagtttgagggtataaacatcaat
agtatgcaagtccccccaccaacaccaacaccgagtttaacagtcatttg
acgttgaagggacccaaagctgtcatttgggcatgccatcacctgcttat
ctcaaaaggcctcctttcgggaggtgtgtctgagcaaggcgactgtggtc
cagcaggtctgagggaaacagcagtgtgctctgcagcagcagttccgtct
tcctttcctcttggagataagcctgtgaaatggaaagataaatacaccgg
tacatgcctagagtcgctaaacttaaactgggtgttagtgaaaggtagcc
cgcattaggagctattagacaaagggttgtagaaccctggcaaagcttac
cttctcagaaacagcaagagtgaccatactttctgcaattctggggcaaa
gaaatttgacttcttagagcatgcacaagttaatttaaatactagggaaa
ataaaaaccctaagaaaacaagatatctttttagattatttcagtgtagc
ttctagctggtgccactcgggaatattgaattggtggtatttttttctct
ttgcttgaatccatagagtctgaacatgcatcctcacattccaggagttc
taagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97599042_97600142
seq2: B6Ng01-350N02.g_68_1173 (reverse)

seq1  CACTTAGAACT-CTGGGATGTGAGATTGCCATGTTTCAGACTCTATGAAT  49
      ||||||||||| |||| |||||||  || |||| ||||||||||||| ||
seq2  CACTTAGAACTCCTGGAATGTGAGGATG-CATG-TTCAGACTCTATGGAT  48

seq1  --CAGCAAAGAGAGAAAAATACCAACCAATTCATAATTTCCCGAGTTGCA  97
         |||||||||| ||||||||| ||||||||| |  ||||||||| |||
seq2  TCAAGCAAAGAGAAAAAAATACC-ACCAATTCA-ATATTCCCGAGTGGCA  96

seq1  CCAGCTAG-AGCTACACTGAAATAATCT-AAAAGATATTCTGTTT--CTA  143
      |||||||| ||||||||||||||||||| |||||||||  |||||   ||
seq2  CCAGCTAGAAGCTACACTGAAATAATCTAAAAAGATATCTTGTTTTCTTA  146

seq1  GGGTTTTTATTTTCCCTAGTATTT-AATTAACTTGTGCATGCTCT-AGAA  191
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  GGGTTTTTATTTTCCCTAGTATTTAAATTAACTTGTGCATGCTCTAAGAA  196

seq1  GTCAAATTTCTTTGCCCCAGAATTGCAGAAAGTATGGTCACTCTTGCTGT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTTCTTTGCCCCAGAATTGCAGAAAGTATGGTCACTCTTGCTGT  246

seq1  TTCTGAGAAGGTAAGCTTTGCCAGGGTTCTACAACCCTTTGTCTAATAGC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAAGGTAAGCTTTGCCAGGGTTCTACAACCCTTTGTCTAATAGC  296

seq1  TCCTAATGCGGGCTACCTTTCACTAACACCCAGTTTAAGTTTAGCGACTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATGCGGGCTACCTTTCACTAACACCCAGTTTAAGTTTAGCGACTC  346

seq1  TAGGCATGTACCGGTGTATTTATCTTTCCATTTCACAGGCTTATCTCCAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATGTACCGGTGTATTTATCTTTCCATTTCACAGGCTTATCTCCAA  396

seq1  GAGGAAAGGAAGACGGAACTGCTGCTGCAGAGCACACTGCTGTTTCCCTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGGAAGACGGAACTGCTGCTGCAGAGCACACTGCTGTTTCCCTC  446

seq1  AGACCTGCTGGACCACAGTCGCCTTGCTCAGACACACCTCCCGAAAGGAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGCTGGACCACAGTCGCCTTGCTCAGACACACCTCCCGAAAGGAG  496

seq1  GCCTTTTGAGATAAGCAGGTGATGGCATGCCCAAATGACAGCTTTGGGTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTGAGATAAGCAGGTGATGGCATGCCCAAATGACAGCTTTGGGTC  546

seq1  CCTTCAACGTCAAATGACTGTTAAACTCGGTGTTGGTGTTGGTGGGGGGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAACGTCAAATGACTGTTAAACTCGGTGTTGGTGTTGGTGGGGGGA  596

seq1  CTTGCATACTATTGATGTTTATACCCTCAAACTTTCTGTACAGACTTGCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATACTATTGATGTTTATACCCTCAAACTTTCTGTACAGACTTGCT  646

seq1  TTGGAGATCTTAATCCATCAAGTTGGTTCAATTATCCCTTGTCTGCCTGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATCTTAATCCATCAAGTTGGTTCAATTATCCCTTGTCTGCCTGG  696

seq1  TCGTGACTCCTTGCTACTCCTCTGGCTTACCTTGTGTTTTATTTTGATGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGACTCCTTGCTACTCCTCTGGCTTACCTTGTGTTTTATTTTGATGC  746

seq1  TTACACATGCCCCATCGAAAATTTTAACTACAGATACGATAGGAAGCTGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATGCCCCATCGAAAATTTTAACTACAGATACGATAGGAAGCTGA  796

seq1  TGCTTCAACAACACCTCTCGTTTATAAAAACAAAAAGGCAAGTGGACCAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAACAACACCTCTCGTTTATAAAAACAAAAAGGCAAGTGGACCAT  846

seq1  GCCACCAGACAGAAGAATTGGTAAGGTTGAGTGAGCCCAAACCCCATAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGACAGAAGAATTGGTAAGGTTGAGTGAGCCCAAACCCCATAAA  896

seq1  TCTCAGAATCGAGAACAGTAGAAATGGGACCACCACTTCCTGCCTGCTTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAATCGAGAACAGTAGAAATGGGACCACCACTTCCTGCCTGCTTC  946

seq1  TACCTGCTCTGGGACAAGTAACCACGACCCCACTGAGAGGACCATGATAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTCTGGGACAAGTAACCACGACCCCACTGAGAGGACCATGATAA  996

seq1  TCAGTCACTGTCGAATAAGAGCCTGGAGTTTCCCATGCTAACGAGGTATC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACTGTCGAATAAGAGCCTGGAGTTTCCCATGCTAACGAGGTATC  1046

seq1  GACATCAGTCCTGAGCAGTCAGCCAATGAACTTCCCTTCCTGGGCCAGGT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGTCCTGAGCAGTCAGCCAATGAACTTCCCTTCCTGGGCCAGGT  1096

seq1  GTAGGAATTC  1101
      ||||||||||
seq2  GTAGGAATTC  1106