BAC Information

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BAC

Clone NameB6Ng01-350P09
Chromosome10 (Build37)
Map Location 123,860,970 - 123,862,023
singlet/doubletsinglet
Overlap genenone
Upstream geneAI851790
Downstream gene4930503E24Rik, LOC671416, Slc16a7, LOC100042987, EG668313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350P09.bB6Ng01-350P09.g
ACCGA131478GA131479
length1,2051,052
definitionB6Ng01-350P09.b B6Ng01-350P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctatagtccaccttcttgagttctttatagatattagaaaattctcac
taaccaaatccaagaacacatcaaaacaatcatccgtcctgaccaagtag
gtttcattccagggatgcagggatggtttaatataaggaaatccatcaat
gtaatccactatataaacaaactcaaagaaaaaaaccacatgatcatctc
attagatgctgagaaagcatttgacaaaaatccaacacccattcatgata
aaagttgtggaaagatcaggaatttgaggcccatacctaaacatgataaa
agcaatctacagcaaaccagtagccaacatcaaagtaaagggtgagaagc
tggaagcaatcacattaaaatcagggactagacaaggctgcccactttct
ccctacctattcaacattgtacttgaagtcctagccagagcaattcaaaa
tcaaaaggagatcaagggtatacaaattggaaaggaagaagtaaatatca
ctttttgcagatgatatgatagtatatataagtgaccctaaaaattccac
cagagaactcctaaacctgataaactgcttcagtgaaatagctggttata
taattaactcaaggagtctgcggacacccacaaggacccacacagtatcc
gccacgagatcctaagacctctggttattggaacacagcgcccgctccaa
tccaatcgcacaggtcctgagactgcattaattaaggaagcacgtaaacc
ggcctgatactgggctcaagtcccttctggcctgcccactgcagcaccgg
ggttcctggccccgggggagcctatggacacccacaaggacccacatagg
atccgccatgggatcctaagtcatctggttgagtggaacaaaatttctgc
caggaggcaggttcaaaccaccagatatctgggcaccattcccttgcagg
agggagagctttgcatgcagagagtacttctgacccactgaaactaaagg
atatggagctagtctcccagtcttgctgatatgaggcttaacataatcac
cttgagaacagctctcttacccaagaacactattaacactagcctccgag
ttatcagatgccaagcaccatagattctactaaacagaaaatctgagaac
gcgct
gaattccaggaccagaaagcaggagtgggtgggttggggagcagggcagg
gggagggtctaggggactttcaggaaagcatttgaaatgtaagtgaagaa
aatatctaataaaaatgatttaaaaaaaaagaaaaaaatctccaacttaa
aaaaaaagaatattactctttgattatttttaattttgatgagttcctta
agaaatacatgcaatttattttgaccttgtagattattctcttacaactc
ttttcaaatttatccccaactctcctatccatccaacttgatgtgtttaa
aattgttttgtaagcccgtcaagtaccattcatgttgccaatgcactctt
ggatgtgtggccttcctctggagcataatgggcctacatgagctcaatgt
ttaccacaaattgactttccttttcccagtaactatccactactagtagt
gtctcagctaggggagacgtcatgcccacacccctctctgtgctgcaagt
ttatttggcctgagcagccactggctctctgtgagttgtcaagttttcta
cgggttcatatgtgtaactgccctgtagtgttcaagaaagactgtttctg
tgcaatcatccactaccgctggcccttatgatcatttctctcttctcttc
taaattgttcactgagacttggaagaatggtgcgtgatgctgtctcattg
aaggctcagaaatccagttctctttatttctgtacattgaccaattgaag
gtctctgcataaatttgttttctactataatgaaaggctcatgtatgagg
gttgagagatacactagctatggctataactgtaactccttcagaatcta
tgtccatctagtggaataatagcaaaaggttcttccctggggtatatgat
gtttctaggtacagattcttgatgccaaaatggtgtcaatttttcctttt
cattatttaggaatgggtatacattgtaacttcctcattattacactatg
tgagctaacagagggagatgaaacttttgaagtccaagttgactatttca
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123860970_123862023
seq2: B6Ng01-350P09.g_67_1118

seq1  GAATTCCAGGACCAGAAAGCAGGAGTGGGTGGGTTGGGGAGCAGGGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACCAGAAAGCAGGAGTGGGTGGGTTGGGGAGCAGGGCAGG  50

seq1  GGGAGGGTCTAGGGGACTTTCAGGAAAGCATTTGAAATGTAAGTGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTCTAGGGGACTTTCAGGAAAGCATTTGAAATGTAAGTGAAGAA  100

seq1  AATATCTAATAAAAATGATTTAAAAAAAAAGAAAAAAATCTCCAACTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATAAAAATGATTTAAAAAAAAAGAAAAAAATCTCCAACTTAA  150

seq1  AAAAAAAGAATATTACTCTTTGATTATTTTTAATTTTGATGAGTTCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAATATTACTCTTTGATTATTTTTAATTTTGATGAGTTCCTTA  200

seq1  AGAAATACATGCAATTTATTTTGACCTTGTAGATTATTCTCTTACAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACATGCAATTTATTTTGACCTTGTAGATTATTCTCTTACAACTC  250

seq1  TTTTCAAATTTATCCCCAACTCTCCTATCCATCCAACTTGATGTGTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATTTATCCCCAACTCTCCTATCCATCCAACTTGATGTGTTTAA  300

seq1  AATTGTTTTGTAAGCCCGTCAAGTACCATTCATGTTGCCAATGCACTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTTGTAAGCCCGTCAAGTACCATTCATGTTGCCAATGCACTCTT  350

seq1  GGATGTGTGGCCTTCCTCTGGAGCATAATGGGCCTACATGAGCTCAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTGGCCTTCCTCTGGAGCATAATGGGCCTACATGAGCTCAATGT  400

seq1  TTACCACAAATTGACTTTCCTTTTCCCAGTAACTATCCACTACTAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACAAATTGACTTTCCTTTTCCCAGTAACTATCCACTACTAGTAGT  450

seq1  GTCTCAGCTAGGGGAGACGTCATGCCCACACCCCTCTCTGTGCTGCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGCTAGGGGAGACGTCATGCCCACACCCCTCTCTGTGCTGCAAGT  500

seq1  TTATTTGGCCTGAGCAGCCACTGGCTCTCTGTGAGTTGTCAAGTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGCCTGAGCAGCCACTGGCTCTCTGTGAGTTGTCAAGTTTTCTA  550

seq1  CGGGTTCATATGTGTAACTGCCCTGTAGTGTTCAAGAAAGACTGTTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTCATATGTGTAACTGCCCTGTAGTGTTCAAGAAAGACTGTTTCTG  600

seq1  TGCAATCATCCACTACCGCTGGCCCTTATGATCATTTCTCTCTTCTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCATCCACTACCGCTGGCCCTTATGATCATTTCTCTCTTCTCTTC  650

seq1  TAAATTGTTCACTGAGACTTGGAAGAATGGTGCGTGATGCTGTCTCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTTCACTGAGACTTGGAAGAATGGTGCGTGATGCTGTCTCATTG  700

seq1  AAGGCTCAGAAATCCAG-TCTC-TTATTTCTGTACATTGACCAATTGAAG  748
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  AAGGCTCAGAAATCCAGTTCTCTTTATTTCTGTACATTGACCAATTGAAG  750

seq1  GTCTCTGCATAAA-TTGTTTTCTACTATAATG-AAGGCTCATGTATGAGG  796
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  GTCTCTGCATAAATTTGTTTTCTACTATAATGAAAGGCTCATGTATGAGG  800

seq1  GTTGAGAGATACACTAGCTATGGCTATAACTGTAACTCCTTCAGAATCTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGATACACTAGCTATGGCTATAACTGTAACTCCTTCAGAATCTA  850

seq1  TGTCCATCTAGTGGAATAATAGCAAAAGGTTCTTCCCTGGGGTATATGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCTAGTGGAATAATAGCAAAAGGTTCTTCCCTGGGGTATATGAT  900

seq1  GTTTCTAGGTACAGATTCTTGATGCCAATAATGGTGTCAATTTTTTCTTT  946
      |||||||||||||||||||||||||||| ||||||||||| |||||| ||
seq2  GTTTCTAGGTACAGATTCTTGATGCCAA-AATGGTGTCAA-TTTTTCCTT  948

seq1  TTCATTATTTTAGGAATGGGTATACATTGTTACTTCACTCATTATTACAC  996
      ||||||| |||||||||||||||||||||| ||||| |||||||||||| 
seq2  TTCATTA-TTTAGGAATGGGTATACATTGTAACTTC-CTCATTATTACA-  995

seq1  CTATGTGAGCTAACCAGA-GGAGATGAAACTTTTGACAGTCCAGGTTGAC  1045
      ||||||||||||| |||| ||||||||||||||||| |||||| ||||||
seq2  CTATGTGAGCTAA-CAGAGGGAGATGAAACTTTTGA-AGTCCAAGTTGAC  1043

seq1  TATTTCATG  1054
      |||||||||
seq2  TATTTCATG  1052