BAC Information

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BAC

Clone NameB6Ng01-350P13
Chromosome10 (Build37)
Map Location 51,043,356 - 51,044,358
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629652, Ascc3, Sim1, LOC268300
Downstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350P13.bB6Ng01-350P13.g
ACCGA131486GA131487
length1,2171,123
definitionB6Ng01-350P13.b B6Ng01-350P13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgggcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaagacaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccatgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagctttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccaaagaacgggtcaccttatct
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccatttcttcttacaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagattttccttca
cctgtgtctttcagggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagttgatcatagggaacaccccatgag
gctataggcgcatgcttggcagcagatggcattgtaacagagtagaaacc
ataggcatttgagcaacttctttatgtacttgcttgtgccttcaggacct
gctctggccgatcacgtaatataccacttcattgataatagactgctgct
ggtgcgcgttccacttttatgactggcaaggtctgaatagtacccagctc
atggatgttagtccagttcgcaatagtaccttggcgtttcctaatggtcc
aacagccttccagattc
gaattctctgtttagctttttatcccatttttaattggattttttgggtt
ttggtggttagcttcttgagttctttatatatttggatattggtcttcta
ttggatgtgtggtaagtgaagaatattttcctaatctgtaggttgccaat
ttttcctattgattatgtcatttgccttacagaagattttcagtatcagg
aggtcccatttatcagtacttgatcttagagtataagccactgaagttct
gtttagtaaaatttcgcccatgccaacaagttcaaagctctttcctactt
tttcttctatttgtttcagtgtatctggttttatgttgaggtccttgatc
cagttggacttaaactttgtgaaaggtgacaatatggatctattttcatt
tttcttcatactacctgccagcaccatttattgaaaatgttttcttttct
tttttgtttttgtttttgttttttgagacagggtttctctgtatagtcct
ggctgttctggaactcactttgtagaccaggttggcctcgaactcagaaa
tttgcctgcctctgcctcctgagtactgggattaaaggcgtgtgccacca
cgcccggcttgaacatgttttcttttgattgtggtaaatgatggttttga
tgtcttcttgtattcagtttgcaagaattttattgagtttgcattgatat
tcataagtgaaattggtctgaatttatttatttatttttgttgggtccct
gtatagtttaggtatcagagtaattctggcttcatggaatgaattaggtc
gtgttccttctgtttctatcttatggaatggctcgaggtgtgttgatatt
agtctgtgcatattcaggcatatcacttcattacacagagtctatctcaa
tttttaaaacttgaggtctttggtgcttttactaaacattttagaaaact
acatctgtgtcaagactatattatccactgaaatacttttctggaatagt
atacatgaaatttcatatgaattctttttaatagaatggtgcatacctgc
attagaaatccaaaagtaaatataaaggaataaatattttcaatcatttg
ctaaacatgaactgatacaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51043356_51044358
seq2: B6Ng01-350P13.g_181_1191

seq1  TAAGTGAAGAATATTTTCCTAATCTGTAGGTTGCCAATTTTTCCTATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAAGAATATTTTCCTAATCTGTAGGTTGCCAATTTTTCCTATTGA  50

seq1  TTATGTCATTTGCCTTACAGAAGATTTTCAGTATCAGGAGGTCCCATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCATTTGCCTTACAGAAGATTTTCAGTATCAGGAGGTCCCATTTA  100

seq1  TCAGTACTTGATCTTAGAGTATAAGCCACTGAAGTTCTGTTTAGTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTTGATCTTAGAGTATAAGCCACTGAAGTTCTGTTTAGTAAAAT  150

seq1  TTCGCCCATGCCAACAAGTTCAAAGCTCTTTCCTACTTTTTCTTCTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCCCATGCCAACAAGTTCAAAGCTCTTTCCTACTTTTTCTTCTATTT  200

seq1  GTTTCAGTGTATCTGGTTTTATGTTGAGGTCCTTGATCCAGTTGGACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGTGTATCTGGTTTTATGTTGAGGTCCTTGATCCAGTTGGACTTA  250

seq1  AACTTTGTGAAAGGTGACAATATGGATCTATTTTCATTTTTCTTCATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTGAAAGGTGACAATATGGATCTATTTTCATTTTTCTTCATACT  300

seq1  ACCTGCCAGCACCATTTATTGAAAATGTTTTCTTTTCTTTTTTGTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCAGCACCATTTATTGAAAATGTTTTCTTTTCTTTTTTGTTTTTG  350

seq1  TTTTTGTTTTTTGAGACAGGGTTTCTCTGTATAGTCCTGGCTGTTCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTGAGACAGGGTTTCTCTGTATAGTCCTGGCTGTTCTGGA  400

seq1  ACTCACTTTGTAGACCAGGTTGGCCTCGAACTCAGAAATTTGCCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTTGTAGACCAGGTTGGCCTCGAACTCAGAAATTTGCCTGCCTC  450

seq1  TGCCTCCTGAGTACTGGGATTAAAGGCGTGTGCCACCACGCCCGGCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGAGTACTGGGATTAAAGGCGTGTGCCACCACGCCCGGCTTGA  500

seq1  ACATGTTTTCTTTTGATTGTGGTAAATGATGGTTTTGATGTCTTCTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTCTTTTGATTGTGGTAAATGATGGTTTTGATGTCTTCTTGTA  550

seq1  TTCAGTTTGCAAGAATTTTATTGAGTTTGCATTGATATTCATAAGTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTGCAAGAATTTTATTGAGTTTGCATTGATATTCATAAGTGAAA  600

seq1  TTGGTCTGAATTTATTTATTTATTTTTGTTGGGTCCCTGTATAGTTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTGAATTTATTTATTTATTTTTGTTGGGTCCCTGTATAGTTTAGG  650

seq1  TATCAGAGTAATTCTGGCTTCATGGAATGAATTAGGTCGTGTTCCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGTAATTCTGGCTTCATGGAATGAATTAGGTCGTGTTCCTTCTG  700

seq1  TTTCTATCTTATGGAATGGCTCGAGGTGTGTTGATATTAGTCTGTGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCTTATGGAATGGCTCGAGGTGTGTTGATATTAGTCTGTGCATA  750

seq1  TTCAGGCATATCACTTCATTACACAGAGTCTATCTCAATTTTTAAAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCATATCACTTCATTACACAGAGTCTATCTCAATTTTTAAAACTT  800

seq1  GAGGTCTTT-GTGCTTTTACTAAACATTTTAGAAAACTACATCTGTGTCA  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTTGGTGCTTTTACTAAACATTTTAGAAAACTACATCTGTGTCA  850

seq1  AGACTATATTATCCACTGAAATAC-TTTCTGG-ATAGTATACATGAATTT  897
      |||||||||||||||||||||||| ||||||| |||||||||||||| ||
seq2  AGACTATATTATCCACTGAAATACTTTTCTGGAATAGTATACATGAAATT  900

seq1  TCATAATGATTC-TTTTAATAGA--TGTGCATACCTGCATTAAGAAATCC  944
      |||||   |||| ||||||||||   ||||||||||||||| ||||||||
seq2  TCATATGAATTCTTTTTAATAGAATGGTGCATACCTGCATT-AGAAATCC  949

seq1  AAAAGT-AATATAAAG--ATAAATATTTTCAATCAATTGCTAAACATGAA  991
      |||||| |||||||||  ||||||||||||||||| ||||||||||||||
seq2  AAAAGTAAATATAAAGGAATAAATATTTTCAATCATTTGCTAAACATGAA  999

seq1  CTGATACAAATA  1003
      ||||||||||||
seq2  CTGATACAAATA  1011