Query= MSMg01no045_i14.b1 MSMg01no045_i14.b1 CHROMAT_FILE:
MSMg01no045_i14.b1 PHD_FILE: MSMg01no045_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:31 2005
(598 letters)
>mm_chr10_104672759_104673759
Length = 1001
Score = 1139 bits (589), Expect = 0.0
Identities = 597/601 (99%), Gaps = 3/601 (0%)
Strand = Plus / Plus
Query: 1 ctctatgctcagggtattttatatgtcttatgtcagaacagtccgaataattccaacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctatgctcagggtattttatatgtcttatgtcagaacagtccgaataattccaacttc 260
Query: 61 tgcctggacttccagtgcttcattctgctctacctaccttctcctatgagcatttttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcctggacttccagtgcttcattctgctctacctaccttctcctatgagcatttttact 320
Query: 121 atataaaggtactaaaaattaaaagtaacatatcacaaaagaggaacactattcaaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atataaaggtactaaaaattaaaagtaacatatcacaaaagaggaacactattcaaccag 380
Query: 181 atgtcagatgcactttgtcatagtaaag---ttttttttttaaaccaaattcctatatat 237
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 atgtcagatgcactttgtcatagtaaaggttttttttttttaaaccaaattcctatatat 440
Query: 238 gtcattttgaacttgtgacatacaacactgggagagaggcaggaggttagcaccagattg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcattttgaacttgtgacatacaacactgggagagaggcaggaggttagcaccagattg 500
Query: 298 tgcttatgaatccagaaatcaatttaaaatttaagtgcctgggaaagttaaagctcagac 357
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtttatgaatccagaaatcaatttaaaatttaagtgcctgggaaagttaaagctcagac 560
Query: 358 gtgaaactttcaattaaataatccaggggatatggtttcccgttaatatttatacaatga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaaactttcaattaaataatccaggggatatggtttcccgttaatatttatacaatga 620
Query: 418 atacatgtctaaagtgaaatagtacaccaatgagaaatgaatatgaatacatgtatgaat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacatgtctaaagtgaaatagtacaccaatgagaaatgaatatgaatacatgtatgaat 680
Query: 478 aaaatgtacaaataagacgtagcataggtcagaagtctgagtcaaaagtctaatctataa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaatgtacaaataagacgtagcataggtcagaagtctgagtcaaaagtctaatctataa 740
Query: 538 gtgatttcagaaatccatttataggtatagaatgactcgttgcttacaaaacacactttc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgatttcagaaatccatttataggtatagaatgactcgttgcttacaaaacacactttc 800
Query: 598 a 598
|
Sbjct: 801 a 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 1001
Length adjustment: 10
Effective length of query: 588
Effective length of database: 991
Effective search space: 582708
Effective search space used: 582708
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_i14.g1 MSMg01no045_i14.g1 CHROMAT_FILE:
MSMg01no045_i14.g1 PHD_FILE: MSMg01no045_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:31 2005
(465 letters)
>mm_chr10_104794960_104795824
Length = 865
Score = 861 bits (445), Expect = 0.0
Identities = 464/479 (96%), Gaps = 14/479 (2%)
Strand = Plus / Minus
Query: 1 tttgtttagctctgtactccatttttaatagggttatttggttctctggagtctactttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tttgtttagctctgtactccatttttaatagggttatttggttctctggagtctactttc 533
Query: 61 ttgaattccttatatatcttggataatagccctctatcagatgtagggtttgtaaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ttgaattccttatatatcttggataatagccctctatcagatgtagggtttgtaaagatc 473
Query: 121 ttttcccaatctgttggttgctgtttcattttcaaggattctgcacaaaagatattcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttttcccaatctgttggttgctgtttcattttcaaggattctgcacaaaagatattcttt 413
Query: 181 ggatgttaaactagataatctattaaggagtcatctaggatacaaattagatttgaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggatgttaaactagataatctattaaggagtcatctaggatacaaattagatttgaaaat 353
Query: 241 tgtgag--------------gtgtgtgtgtgtgtgtgtgtttaaatgatagtagtgattt 286
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgtgaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttaaatgatagtagtgattt 293
Query: 287 tggaatatttaatattcaagaaaaagaaaaggttaataaatggatatgttatggattctg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tggaatatttaatattcaagaaaaagaaaaggttaataaatggatatgttatggattctg 233
Query: 347 tcatgtgtttattagttatttcctccttgcagagataatatatccgagaaaatcagctaa 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tcatgtgtttattagttatttcctccttgcagagataatatatccgagaaaatcagctaa 173
Query: 407 agaaaggaagggttgggctttgctcttagtgtgaggctaaagttatccatccttgctgt 465
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agaaaggaagggttgggttttgctcttagtgtgaggctaaagttatccatccttgctgt 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
