Query= MSMg01no046_e20.b1 MSMg01no046_e20.b1 CHROMAT_FILE:
MSMg01no046_e20.b1 PHD_FILE: MSMg01no046_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:26 2005
(526 letters)
>mm_chr10_69658221_69659146
Length = 926
Score = 625 bits (323), Expect = 0.0
Identities = 350/359 (97%)
Strand = Plus / Minus
Query: 168 ttcttttattttctttgagacggtgtctcctctattccaggctggcctttcataaaccaa 227
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 926 ttcttttattttctttgagacggcgtctcctctattccaggctggcctttcatacaccaa 867
Query: 228 gtactgaccttcttgcccatctcgccttctagtgctggaactgcaagcaagcaccaccac 287
|||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 866 gtactgaccttcttgcccgtctcaccttctagtgctggaactgcaggcaagcaccaccac 807
Query: 288 ttctggtttgggggtggggggagaacccaaggctgtgggcaccctagataagtgctctac 347
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 806 ttctggtttgggggtgtggggagaacccaaggctgtgggcacgctagataagtgctctac 747
Query: 348 ccctaaactacgtccccagcgtctgtctcttctcctgttcaccaggatattgatagcgta 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ccctaaactacgtccccagcgtctgtctcttctcctgttcaccaggatattgatagcgta 687
Query: 408 ggcagccacacggtaaataaaacgatggaacgtgcagcttgaagtctctcctgaattaca 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ggcagccacacggtaaataaaacgatggaacgtgcagcttgaagtctctcctgaattaca 627
Query: 468 cagaagaaactggcaggccatacaaatcagggccgttcttacagaggtaacactgagat 526
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 626 cagaagaaactggcaggccatacaaatcagggctgttcttacagaggtaacacggagat 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_e20.g1 MSMg01no046_e20.g1 CHROMAT_FILE:
MSMg01no046_e20.g1 PHD_FILE: MSMg01no046_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:26 2005
(598 letters)
>mm_chr10_69483023_69484020
Length = 998
Score = 1096 bits (567), Expect = 0.0
Identities = 592/604 (98%), Gaps = 6/604 (0%)
Strand = Plus / Plus
Query: 1 catacatgttgattagagaaggaagtctacgtagatacagattcaggagcagcaaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 catacatgttgattagagaaggaagtctacgtagatacagattcaggagcagcaaaagat 254
Query: 61 aatttgctatcctgtgtcatcttagttagggttttactgctgtgaacagacaccatgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatttgctatcctgtgtcatcttagttagggttttactgctgtgaacagacaccatgacc 314
Query: 121 aaggcaactc------ttttttttttttttttttggnttttcgagacagggtttctctgt 174
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 315 aaggcaactcttttttttttttttttttttttttggtttttcgagacagggtttctctgt 374
Query: 175 atagccctggctctcctggtaccaaggcaactcttataaggacaacatttaattgggacg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atagccctggctctcctggtaccaaggcaactcttataaggacaacatttaattgggacg 434
Query: 235 ggactggcttgcaggttcagagattcagtccattatcatcaaggtgggagcatggcagaa 294
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 435 ggactggcttgcaggttcagagattcagtccattatcatcaaagtgggagcatggcagaa 494
Query: 295 cccaggcaggcatggtgcaggaggagctgagagttctacctcttgttccaaaggcaaaca 354
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cccaggcaggcattgtgcaggaggagctgagagttctacctcttgttccaaaggcaaaca 554
Query: 355 agacaagtctggctcccatgtggttaagagtggggtctcagagcccactcgcacagtgac 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agacaagtctggctcccatgtggttaagagtggggtctcagagcccactcgcacagtgac 614
Query: 415 acactttttctaacaagaccacacctcccaatagtaccactccctgggttaaacatttaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acactttttctaacaagaccacacctcccaatagtaccactccctgggttaaacatttaa 674
Query: 475 accaccacacgtgtatacctgatgaggtatgcagtctttattttcagagtagggctagag 534
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 accaccacatgtgtatacctgatgaggtatgcagtctttattttcagagtagggctagag 734
Query: 535 gtaaacactggcagcatcaaagtcttagaaacaaatgtctaggtttactcttgatctata 594
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 735 gtaaacactggcagcatcaaagtcttagaaacgaatgtctagatttactcttgatctata 794
Query: 595 aaac 598
||||
Sbjct: 795 aaac 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
