Query= MSMg01no049_f11.b1 MSMg01no049_f11.b1 CHROMAT_FILE:
MSMg01no049_f11.b1 PHD_FILE: MSMg01no049_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:15 2005
(647 letters)
>mm_chr10_119590656_119591700
Length = 1045
Score = 1174 bits (607), Expect = 0.0
Identities = 637/647 (98%), Gaps = 2/647 (0%)
Strand = Plus / Minus
Query: 1 catagaggtgttgggtaagaataacacgggaagacgccttctgcatggagcagcacaaag 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 845 catagaggtgttgggtaagaataacacgggaagaggccttctgcatggagcagcacaaag 786
Query: 61 gtcaccagagacagccgcatgcgattcgtcctatggcactggtaaatacttatccacgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 785 gtcaccagagacagccgcatgcgattcgtcctatggcactggtaaatacttatccgcgaa 726
Query: 121 ggattggagctagcctgcaggtggactgcggagttcagtctaagccaaggacttcagctc 180
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 725 ggattggagctagactgcaggtggactgcggggttcagtctaagccaaggacttcagctc 666
Query: 181 ccatacagaatcccagagaaacccttgtcagtctttcactaaccccgagtgtaggtctga 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccatacagaatcccacagaaacccttgtcagtctttcactaaccccgagtgtaggtctga 606
Query: 241 acattatcatttgtagttgaaatgaatttctaggaggaaagctaaggcttagaaaaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 acattatcatttgtagttgaaatgaatttctaggaggaaagctaaggcttagaaaaacca 546
Query: 301 ggcatttgcctgtcatgtgacctgtctgtcacatgacttgcctgtcacatggctacagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggcatttgcctgtcatgtgacctgtctgtcacatgacttgcctgtcacatggctacagat 486
Query: 361 gagaaagggaaggtgcctttctatgtctctgtattcccaacaaccatgctcttattaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gagaaagggaaggtgcctttctatgtctctgtattcccaacaaccatgctcttattaggg 426
Query: 421 aatttaaaggcctgggcttacaaggggtgtgttgccctcatcaacagacacaggaattga 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 aatttaaaggcctgggcttacaaggggtgtgttggcctcatcaacagacacaggaattga 366
Query: 481 gaaagagaagcaccatgggcactctctgagatgatgatgtcagactcttgtggggagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaaagagaagcaccatgggcactctctgagatgatgatgtcagactcttgtggggagaga 306
Query: 541 gattcagttctgaagatccatgccatccgtctggtttgttccacgcagagagagatttct 600
|||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 305 gatt-agttctgaagatccatgccattagtctggtttgttcca-gcagagagagatttct 248
Query: 601 ctttctaagaaggaaaatgtcaccaggcgtggtggcgcacgccttta 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctttctaagaaggaaaatgtcaccaggcgtggtggcgcacgccttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1045
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1035
Effective search space: 659295
Effective search space used: 659295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_f11.g1 MSMg01no049_f11.g1 CHROMAT_FILE:
MSMg01no049_f11.g1 PHD_FILE: MSMg01no049_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:15 2005
(518 letters)
>mm_chr10_119583311_119584228
Length = 918
Score = 948 bits (490), Expect = 0.0
Identities = 511/518 (98%)
Strand = Plus / Plus
Query: 1 tttaatggaaagtcttccctgtctgatgtattcttctggcatgtaccacagatgtttcct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaacggaaagtcttccctgtctgatgtattcttctggcatgtaccacagatgtttcct 260
Query: 61 gccaccgccggtcatatttatggtagaactctgctgctctagattgggtcggaagtgcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccaccgccggtcatatttatggtagaactctgctgctctagattgggtcggaagtgcgc 320
Query: 121 cgcagcaaaatccgttagtttgggttggagctggtcatccaagagtatgtttgcactgaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcagcaaaatccgttagtttgggttggagctggtcatccaagagtatgtttgcactgaa 380
Query: 181 agtgtggacaaagacagacaggacaaaacatcacagaggctgagctatgacatggctgag 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 agtgtggacaaagacagacaggacaaaacatcacagaggctgagctacgacatggctgag 440
Query: 241 tgattcagaacactgtaagatgaagtcaaacatagatccccttgagcgaatacaaattca 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tgattcagaacactgtaagatgaagtcaaacatagatccccttgagcgagtacaaattca 500
Query: 301 aacctttttcttcaagcataaacataaatttaagtgaaacctaaagagaaaaaaatctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacctttttcttcaagcataaacataaatttaagtgaaacctaaagagaaaaaaatctga 560
Query: 361 cccatgaacagtgggtatttcagattttgaaacatgtgcagatgctgtgccaacaggaca 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 cccatgaacagtgggtatttcagattttgaaacatgtgtagatgctgtgccaacaggaca 620
Query: 421 aactaagattaaccacagcacgttgcttgtactcttatggggaccatgagctcagtttta 480
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactaagattaaccacatcaggttgcttgtactcttatggggaccatgagctcagtttta 680
Query: 481 agcagctagtagtggaatctgttatatgcagagaggtg 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcagctagtagtggaatctgttatatgcagagaggtg 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
