Query= MSMg01no049_g08.b1 MSMg01no049_g08.b1 CHROMAT_FILE:
MSMg01no049_g08.b1 PHD_FILE: MSMg01no049_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:22 2005
(436 letters)
>mm_chr10_101311528_101312362
Length = 835
Score = 739 bits (382), Expect = 0.0
Identities = 412/422 (97%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 15 ggaattcacattaactcacatctaccctttgtcctttctacaattctctaaagactgaac 74
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 215 ggaattcacattaactcacatcttccctctgtcctttctacaattctctaaagactgaac 274
Query: 75 agccaatctttcaccctgtttcttccccattctcttctatctcctctcctttcatctttt 134
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agccaatttttcaccctgtttcttccccattctcttctatctcctctcctttcatctttt 334
Query: 135 ctttccttccttctcccattctcattttgttttggtttttttcttttcttccttcctccc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctttccttccttctcccattctcattttgttttggtttttttcttttcttccttcctccc 394
Query: 195 atccttctcttgcattctttctttcaattttaagactacagtcagcacactggacttcag 254
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 395 atccttctcttgcattcattctttcaatttgaagactacagtcagcacactggacttcag 454
Query: 255 acatacaagtgaactgtctagctttgcagtattctgtacctcattaatcagttaagaatt 314
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 acatacaagtgaactgtctggctttgcagtattctgtacctcattaatcagttaagaatt 514
Query: 315 ttgatcattagcctatttatatttacatgaacaataataccaaaatgtttaaaatccctt 374
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 515 ttgatcattagcctatttatatttacatgaacaataatacaaaaatgtttaaaatccctt 574
Query: 375 ttttttcctgtaatgtctaatgtggtctgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgt 434
|| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttctt-cctgtaaagtctaatgtggtctgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgt 633
Query: 435 gt 436
||
Sbjct: 634 gt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 835
Length adjustment: 9
Effective length of query: 427
Effective length of database: 826
Effective search space: 352702
Effective search space used: 352702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_g08.g1 MSMg01no049_g08.g1 CHROMAT_FILE:
MSMg01no049_g08.g1 PHD_FILE: MSMg01no049_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:22 2005
(739 letters)
>mm_chr10_101376912_101378047
Length = 1136
Score = 1323 bits (684), Expect = 0.0
Identities = 726/742 (97%), Gaps = 9/742 (1%)
Strand = Plus / Minus
Query: 1 tcattttccagtatctagaaagaaatcatacatgacggatgtaatttccatctttacctt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 936 tcattttccagtatctagaaagaaatcatacatgaaggatgtaatttccat-tttacctt 878
Query: 61 gcagagtatattagtaatttactatagaaatttatgactcttattaatcaaactatatct 120
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 877 gcagagtatattagtaatttactatagaaatttatga--cttattaatcaaaccatatct 820
Query: 121 taatactgaataacaatgctttattaaagaaaatagaaacacatcaaaattcatattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 taatactgaataacaatgctttattaaagaaaatagaaacacatcaaaattcatattaaa 760
Query: 181 tttgttaagagaataatactttttctataatttatagactaactgaaagataaagggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tttgttaagagaataatactttttctataatttatagactaactgaaagataaagggatt 700
Query: 241 caaaaaccaaacaaaaaagcaccatagaaacatcaacaagatttcaaattaaatataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 caaaaaccaaacaaaaaagcaccatagaaacatcaacaagatttcaaattaaatataaaa 640
Query: 301 caagtgaaaatattatttattatgctaaataatgtgtttttgcaaagttacactaaaaat 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 639 caagtgaaaatattatttattacgctaaataatgtgtttttgcaaagttacactaaaaat 580
Query: 361 aattcgtaataatttacaatatttctgccatggcataaaatacgtcttaagcaatttgta 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aatttgtaataatttacaatatttctgccatggcataaaatacgtcttaagcaatttgta 520
Query: 421 gttaagcatttaaaaattaaatcactgcacatgctcaaaattatgttacctttaaaaaaa 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gttaagtatttaaaaattaaatcactgcacatgctcaaaattatgttacctttaaaaaaa 460
Query: 481 ttaccatatgattatattaatttattgtgcaattcaaagaattacattaatatataagca 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 taaccatatgattatattaatttattgtgcaattcaaagaattacattaatatataagca 400
Query: 541 aatatttatatagttgccatttaacaatgagaattcattatatcaaccttgttttcttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aatatttatatagttgccatttaacaatgagaattcattatatcaaccttgttttcttaa 340
Query: 601 tgaaatagtgctcaactatacgtaaaagcaaaaaggttttgaatc-acaaattaataaca 659
||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||
Sbjct: 339 tgaaatagtgctcaactatacttaaaagcaaaaaggttttg-atcaacaaattaataaca 281
Query: 660 tttaccttcctgcactaaactgtataatcctttcataaataaccct--acactgagaaat 717
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 280 tttaccttcctgcactaaactgtataatcctttcataaataa--cttcacactgagaaat 223
Query: 718 gaaatttcattttccttatagc 739
||||||||||||||||||||||
Sbjct: 222 gaaatttcattttccttatagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 739
Length of database: 1136
Length adjustment: 10
Effective length of query: 729
Effective length of database: 1126
Effective search space: 820854
Effective search space used: 820854
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
