Query= MSMg01no049_h23.b1 MSMg01no049_h23.b1 CHROMAT_FILE:
MSMg01no049_h23.b1 PHD_FILE: MSMg01no049_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:34 2005
(703 letters)
>mm_chr10_110173005_110174106
Length = 1102
Score = 733 bits (379), Expect = 0.0
Identities = 430/447 (96%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 1 gtcccacaggtaatatgacacctcacattgtccccctttctatgttctcagttagtatcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 gtcccacaggtaatatgacacctcacattgtccccctttctatg-tctcagttagtatcc 259
Query: 61 ggcaggtttaggacatgccagtcctttaaaagaagcgccaggagaatgacaaaatagtca 120
|||||||||| |||||||||||||||||||||||||||||||| ||| |||| || ||||
Sbjct: 260 ggcaggtttacgacatgccagtcctttaaaagaagcgccaggaaaattacaagatggtca 319
Query: 121 tataaccttgttgtccttaaggcagaaattttggctgatttatattaactctggctgtgg 180
|||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||
Sbjct: 320 cataaccttgttgcccttaagacagaagttttggttgatttatattaactctggctgtgg 379
Query: 181 tctaatctttgagatatgtcattacttacaaagatcaaacaattgaacaaagcttgagga 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 tctaatctttgagatatgtcattacttacaaagatcaaacaattaaacaaagcttgagga 439
Query: 241 aaaagaacaatttaccctaaaggatattctagcattatgtcattgtgattgtaactatct 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 aaaagagcaatttaccctaaaggatattctagcattatgtcattgtgattgtaaatatct 499
Query: 301 ataagatatttaatagctgcaagaaaactaaccagtaaactgaaaaaacaaattcctaga 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataagatatttaatagccgcaagaaaactaaccagtaaactgaaaaaacaaattcctaga 559
Query: 361 gtaaatgtcaatgagcttaagcaaacagtgagcactcggggatgctacccagcaaacagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtaaatgtcaatgagcttaagcaaacagtgagcactcggggatgctacccagcaaacagt 619
Query: 421 gagcactcggggatgctacccagcaaa 447
||||||||||||||||| ||||||||
Sbjct: 620 gagcactcggggatgctgtccagcaaa 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1102
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1092
Effective search space: 756756
Effective search space used: 756756
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no049_h23.g1 MSMg01no049_h23.g1 CHROMAT_FILE:
MSMg01no049_h23.g1 PHD_FILE: MSMg01no049_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:34 2005
(596 letters)
>mm_chr10_110189750_110190745
Length = 996
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Minus
Query: 1 tcttcctgtcagcagtgactcatataatgaaagcggagcaaggttcaacatctctccctt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 426 tcttcctgtcagcagtgactcatataatgaaagcggaggaaggttcaacatctctccctt 367
Query: 61 ttcctgtactgtatcaaccaccctacagccactgtatgctctggttctggctgatcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttcctgtactgtatcaaccaccctacagccactgtatgctctggttctggctgatcagtg 307
Query: 121 cttcaaacagtcctgtcctggacagaggtagaagactgggagaaactggtttctgggtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cttcaaacagtcctgtcctggacagaggtagaagactgggagaaactggtttctgggtcc 247
Query: 181 aaaggctctggttgtataagtgacagtggcccccatggactcagagggtgtggccttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aaaggctctggttgtataagtgacagtggcccccatggactcagagggtgtggccttgtt 187
Query: 241 ggaagacatcatgtgtcagtgggggtgggctttacggtttcagaagctgaagccaggccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggaagacatcatgtgtcagtgggggtgggctttacggtttcagaagctgaagccaggccc 127
Query: 301 agtaactcttcctgctgtctgaaagctggatgtagaactctcagttcccttcctagcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agtaactcttcctgctgtctgaaagctggatgtagaactctcagttcccttcctagcact 67
Query: 361 gtgtctacctgcactccaccatgcttcctgccatgataataatggactaaacatctgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gtgtctacctgcactccaccatgcttcctgccatgataataatggactaaacatctgaac 7
Query: 421 tgtaag 426
||||||
Sbjct: 6 tgtaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
