Query= MSMg01no052_j03.b1 MSMg01no052_j03.b1 CHROMAT_FILE:
MSMg01no052_j03.b1 PHD_FILE: MSMg01no052_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:14 2005
(439 letters)
>mm_chr10_88418423_88419260
Length = 838
Score = 756 bits (391), Expect = 0.0
Identities = 412/421 (97%), Gaps = 5/421 (1%)
Strand = Plus / Minus
Query: 19 tcctagcaccaaaacaaaaataaggcagaaacagcatctaagtgtgaccagctttccaac 78
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 836 tcctagcaccaaaacaaaaataaggcagaaacagcatctgagtgtgaccagttttccaac 777
Query: 79 ttaaggctataggacaggttttgtagggtccaggctaggtaaaggcataactcagggcat 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ttaaggctataggacaggttttgtagggtccaggctaggtaaaggcataactcagggcat 717
Query: 139 ttgcagcaataatctgcaaatctagagtagaaaagggaatccaaaagactaaagaagaca 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ttgcagcaataatctgcaaatctagagtagaaaagggaatccaaaagactaaagaagaca 657
Query: 199 gacagactgacagacagacagaacctaagtttattgatatagataactatgcccaagcaa 258
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gacagac----agacagacagaacctaagtttattgatatagataactatgcccaagcaa 601
Query: 259 aaatctgtaaattttgttgtgaatactgatatgaaaaaaatttatagagtcaaagaagat 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaatctgtaaattttgttgtgaatactgatatgaaaaaaatttatagagtcaaagaagat 541
Query: 319 gagactgcaaaaaaattttgaagtctagactgtttaaaaatatagttttgtctaataatc 378
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gagactgcaaaaaaattt-gaagtctagactgtttaaaaatatagttttgtctaataatc 482
Query: 379 ataagtacaataaagggtagctgtatttttcttctagaatatctacttggaatatttctg 438
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataagtacaataaggggtagttgtatttttcttctagaatatctacttggaatatttctg 422
Query: 439 a 439
|
Sbjct: 421 a 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_j03.g1 MSMg01no052_j03.g1 CHROMAT_FILE:
MSMg01no052_j03.g1 PHD_FILE: MSMg01no052_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:14 2005
(368 letters)
>mm_chr10_88282119_88282886
Length = 768
Score = 323 bits (167), Expect = 1e-92
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 1 agctgtgaactgggaagcttaccattaggaaaagcagatagggtgagcagaactaaccat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 agctgtgaactgggaagcttaccactaggaaaagcagatagggtgagcagaactaaccat 260
Query: 61 atcagggaatagtaaggagacaagaggcacacctcagagaggagggtgagatggctaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcagggaatagtaaggagacaagaggcacacctcagagaggagggtgagatggctaggg 320
Query: 121 agggtgggaaatgatggagaaacatgcatctcaaaaccccagccaggcataggagtctg 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 agggtgggaaatgatggagaaacatgcatctcggaaccccagccaggcataggagtctg 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
