Query= MSMg01no053_k06.b1 MSMg01no053_k06.b1 CHROMAT_FILE:
MSMg01no053_k06.b1 PHD_FILE: MSMg01no053_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:36 2005
(236 letters)
>mm_chr10_8661508_8662143
Length = 636
Score = 412 bits (213), Expect = e-120
Identities = 231/237 (97%), Gaps = 2/237 (0%)
Strand = Plus / Minus
Query: 1 gcctgctgcgaag-aaatacttgacacaagagtccatgtgcgcataacctgaaggagagc 59
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gcctactgcgaagaaaatacttgacacaagagtccatgtgcgcataacctgaaggagagc 377
Query: 60 actcaggacaggagcacgaattggatactgaagggaagactccttccttagagactggtg 119
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 actcaggacgggagcacggattggatactgaagggaagactccttccttagagactggtg 317
Query: 120 ggaagctaggtagatggttgtgcaaaattccaaacgagcatttatggcagtctcgtgagt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggaagctaggtagatggttgtgcaaaattccaaacgagcatttatggcagtctcgtgag- 258
Query: 180 tgtgcgatcgtcagaatttgtccctcttctatgtactgcttactctatgtgggaaag 236
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 257 tgtgcgatcgtcagaatttgtccctcttcgatgtactgcttactctatgtgggaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_k06.g1 MSMg01no053_k06.g1 CHROMAT_FILE:
MSMg01no053_k06.g1 PHD_FILE: MSMg01no053_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:36 2005
(214 letters)
>mm_chr5_144396099_144396712
Length = 614
Score = 406 bits (210), Expect = e-118
Identities = 213/214 (99%)
Strand = Plus / Plus
Query: 1 agtctggctaggcggactcagtagctgagcagtgtgaggctctgggccccatcctcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctggctaggcggactcagtagctgagcagtgtgaggctctgggccccatcctcagca 260
Query: 61 ctgccgtagtgaagcacggagcagtggcccaggagcctgagaacgtgggagtgtgctttc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccgtagtgaagcacggagcagtggcccaggagcctgagaacgtgggagtgtgctttc 320
Query: 121 agggctgctgccttagaggaacgagttctccagggcgctcgccccgtttgaggagtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggctgctgccttagaggaacgagttctccagggcgctcgccccgtttgaggagtttgg 380
Query: 181 ggtggctggtttttgttttgcttttagtagatta 214
||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtggctggtttttgttttgcttttagtagatta 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
