TTTTTTTTTTNNNNNNNNNNNNCCCCGCTCCCCCTCTCTCGTAATTGCCG
NNGGGGAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAAGAG
GATCCGCGGAATTCTCAATTACCTTTTGCCTTTTCTAACCAAATTTGATT
CATTCCCTTGAAGACTTCTTGTAACATTTTCTTGCCTGTACTACATATAA
ACCACACTATTGTCATACATTCAATTTATCCGAATAATATCTACTATGAA
CTTCCATAAAGGGACTCATCTATAATCCAAGAACTTGTTGAAGGTAGGCT
GAAGGATGACAAGTTCAAGACCAACCTGTTTTACATAGTTCCAGTCTAGT
TTGGGTTGGATGAATTCTCTTAAATATATTTATTCCTTGCTAAAAGTTTT
GTTTTTATGTTTTCCTTATTTTTTCGTCTAAATGCCTAAAATATAATACA
AGGTCAAGATGAATTATGAAACACTTCCTTGTAAATATTCAATTGAAATG
TATCAAATATATTTAAGTCTCCTAATTTTCTTGTAATCCTAATAAATACA
ATAAATACCTTACATGCAACAAACCTACTAGGACACAGAAGTCCACATTA
AATGAATTTTCCCCTAGGTGGTCTCTAACTTTTTGCTGTAATGTTCTTCC
CTAGTAAATGAAGATGGTAAGGGTTTCCAACATCTAAATATGAGGCTGGG
TACAGGGATGTTTCTACTATAAAGTAACAGTGCCTAAAAGACACTTGCAT
TTTCACTTAAGA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTAAAATCCTGAATTTCTCAAAGG
GACACTGAGAGTTTTATCTTTGGTTTGAAGGCAGACTGTAGTGTTATTAC
TGCGTTGAGTCTGGACAGAATGGAGAGAGATTGGAAGACAGTTTGGATCT
GGCTAAAACACTCATTATAAATGAACAGGATTCTCCAAAACTAAGTAGAA
AACAACAAAATGAATCTCTATGTAACTCTCTAGCCTCTTATTTCTCTTAA
CAGTTTTTAATGTTCCGAATATTATTAATATTATATGTTTTGCAAACATA
TTGTTTCAGATTCTTTTAAGACATCATTAACGTTACTGTATTGTGATTAT
ATTTTTGAGCTTTACCATTATAGAGAAAATTATTTCTTTGTGCCATGTTT
TTCAAAATGTAAAGACTTTAGATGTATTTTTTTTCACATTTTCTAGGTAG
ATAATAGTGTAGTCTACATAATGATTCCTTTGATTTTTCTTTTCCATGTT
TTATCTTCTAATTTTAAGTTAGTCCCTTTTAAAGTGGCTAGCATTTCTAG
CATTAGGGTAAAACAAAACAAAACTAAACAAAACCCAACTTAACAAATCA
CCACAGTGTTTTTTTTCTCCAACTTAGAAAGAAATCATTCCAGTCTTATA
TCACAGAAG

Query= MSMg01no054_d09.b1 MSMg01no054_d09.b1 CHROMAT_FILE:
MSMg01no054_d09.b1 PHD_FILE: MSMg01no054_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:21 2005
         (533 letters)



>mm_chr10_101071717_101072649
          Length = 933

 Score =  810 bits (419), Expect = 0.0
 Identities = 488/511 (95%)
 Strand = Plus / Plus

                                                                       
Query: 23  ttttgccttttctaaccaaatttgattcattcccttgaagacttcttgtaacattttctt 82
           |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 223 ttttgcctttcctaaccaaatttgattcattcccttgaagacttcttgtcacattttctt 282

                                                                       
Query: 83  gcctgtactacatataaaccacactattgtcatacattcaatttatccgaataatatcta 142
           ||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 283 gcctgtactacatattaaccacactattgtcatacattcaatttatctaaataatatcta 342

                                                                       
Query: 143 ctatgaacttccataaagggactcatctataatccaagaacttgttgaaggtaggctgaa 202
           ||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 343 ctatgcacttctataaagggacacatctataatccaagaactcgttgaaggtaggctgaa 402

                                                                       
Query: 203 ggatgacaagttcaagaccaacctgttttacatagttccagtctagtttgggttggatga 262
           ||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||
Sbjct: 403 ggatgacaagttcgagaccaacctgttttacatagttctagtctattttgtgttggatga 462

                                                                       
Query: 263 attctcttaaatatatttattccttgctaaaagttttgtttttatgttttccttattttt 322
           ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 463 attctcttaaaaatatttattccttgctaaaagttttgtttttatgtttttcttactttt 522

                                                                       
Query: 323 tcgtctaaatgcctaaaatataatacaaggtcaagatgaattatgaaacacttccttgta 382
           || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 523 tcttctaaatgcctaaaatataatacaaggtcaagatgaattatgaaatacttccttgta 582

                                                                       
Query: 383 aatattcaattgaaatgtatcaaatatatttaagtctcctaattttcttgtaatcctaat 442
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 583 aatattcaattgaaatgtatcaaatatatttaagtctcctaatttgcttgtaatgctaat 642

                                                                       
Query: 443 aaatacaataaataccttacatgcaacaaacctactaggacacagaagtccacattaaat 502
           ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 643 aaatacaataaataccttacatgcagcaaacctactaggacacagaagtccgcattaaat 702

                                          
Query: 503 gaattttcccctaggtggtctctaacttttt 533
           ||||||| |||||||||||||||||||||||
Sbjct: 703 gaatttttccctaggtggtctctaacttttt 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no054_d09.g1 MSMg01no054_d09.g1 CHROMAT_FILE:
MSMg01no054_d09.g1 PHD_FILE: MSMg01no054_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:21 2005
         (338 letters)



>mm_chr10_101168179_101168916
          Length = 738

 Score =  592 bits (306), Expect = e-173
 Identities = 330/338 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   actaaaatcctgaatttctcaaagggacactgagagttttatctttggtttgaaggcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 538 actaaaatcctgaatttctcaaagggacactgagagttttatctttggttttaaggcaga 479

                                                                       
Query: 61  ctgtagtgttattactgcgttgagtctggacagaatggagagagattggaagacagtttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 478 ctgtagtgttattactgcgttgagtctggacagaatggagagagattggaagacagtgtg 419

                                                                       
Query: 121 gatctggctaaaacactcattataaatgaacaggattctccaaaactaagtagaaaacaa 180
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |
Sbjct: 418 gatctggctaaaacactcattataaatgaacaggatactccaaaactaagtagaaaatga 359

                                                                       
Query: 181 caaaatgaatctctatgtaactctctagcctcttatttctcttaacagtttttaatgttc 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 358 caaaatgaatctctatgtaactctcgagcctcttatttctcttaacagtttttaatgttc 299

                                                                       
Query: 241 cgaatattattaatattatatgttttgcaaacatattgtttcagattcttttaagacatc 300
           |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cgaaaattattcatattatatgttttgcaaacatattgtttcagattcttttaagacatc 239

                                                 
Query: 301 attaacgttactgtattgtgattatatttttgagcttt 338
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attaacgttactgtattgtgattatatttttgagcttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space:   239841
Effective search space used:   239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)